PROSITE entry PS51901
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General information about the entry
| Entry name [info] | ACP_MB |
| Accession [info] | PS51901 |
| Entry type [info] | MATRIX |
| Date [info] |
16-OCT-2019 CREATED;
07-APR-2021 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51901 |
| Associated ProRule [info] | PRU01249 |
Name and characterization of the entry
| Description [info] | Archaeal CBS proteins (ACP)-type metal binding (MB) domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=35; /DISJOINT: DEFINITION=PROTECT; N1=4; N2=32; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=3.0344079; R2=0.0088734; TEXT='-LogE'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=3595.0000000; R2=0.0000000; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=1124; H_SCORE=3595; N_SCORE=13.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=391; H_SCORE=3595; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-132; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='P'; M= -42,-421, 14, 26, 20, -34, 2, 4, 1, -33, 18, -39, 41, -33, -53, 25, 9, -2, -96, 19; /M: SY='Y'; M= -62,-419, -10, 24, 20, -33, -2, 27, -13, -2, -24, -13,-109, -16, -29, 6, 35, 8,-415, 41; /M: SY='Q'; M= -2,-421, 2, 58,-104, -46, -26, -62, 4,-142, -24, -18, -19, 70, -30, 26, 17, -53, -44, -4; /M: SY='G'; M= -82,-423,-163,-419, -18, 102, 25,-431,-414,-427, -85, -61, -29,-411,-420, -6,-411,-427,-418, -6; /M: SY='I'; M=-161,-145,-421, -19, -16,-429, 11, 74, -27, -11, 20, -46,-101,-131, -23,-128, -56, 46,-412, 59; /M: SY='C'; M=-408, 162,-428,-428,-418,-423,-428,-425,-423,-415,-416,-414,-438,-431,-430,-410,-408,-412,-448,-429; /M: SY='E'; M=-138,-428, 68, 98,-431,-127,-401,-429,-166,-425,-420, -65, 39, 17,-402, -48,-116,-424,-431,-419; /M: SY='S'; M= -8,-419, -16, 37,-114, -89, -3, 17, 27, -44, -95, 17,-414, -60, 28, 39, -36, 26,-425, -34; /M: SY='C'; M=-408, 162,-428,-428,-418,-423,-428,-425,-423,-415,-416,-414,-438,-431,-430,-410,-408,-412,-448,-429; /M: SY='G'; M= -85, -26, -57, 8,-164, 97,-101,-430,-129,-145, 11, 15,-414, -39, -19, -25,-410,-425,-423,-160; /I: I=-30; MI=0; MD=-77; IM=0; DM=-77; /M: SY='N'; M= 21, -81, -69, 33,-110, 19, -47, -70, -27,-110, -33, 59,-413, 37, 9, 16, 15, -13,-425, -32; /M: SY='Y'; M= -94,-423,-151,-152, 43,-176, -28, -4, -25, 19, 32,-184, -14, 0, -49,-414, -15, -5, 89, 90; /M: SY='S'; M= 6,-104, 17,-103, -96, 6,-409,-206, -67, -9, 20,-103,-414,-105, -22, 86, 6, -4,-427,-107; /M: SY='D'; M= -54,-423, 67, 63, -85,-116, -41, -26, -20, -31, -86, -35, 21, 0, -3, -11, 8, -19,-428, -19; /M: SY='D'; M= -28,-421, 63, 2,-111,-104,-300, -83, -40, 22, -43, 45, 48, -34, -18, 4, -15, -25,-428, -19; /M: SY='L'; M=-411,-417,-126, -50, -87,-429, -49, -25,-159, 85,-110, -23,-149,-414, -50, -61, -88, 27,-415, 31; /M: SY='Y'; M= -39, -12, -34, -2, -54,-117, -42, -38, 43, -47, -12, -31,-418, 0, 36, 2, -6, 39, -8, 61; /I: I=-21; MI=0; MD=-53; IM=0; DM=-53; /M: SY='N'; M= -87,-134, 2, 43, -1,-420, -47, -76, -56, -19, -30, 54, -27, 7, 3, 16, -28, -70, 1, 21; D=-21; /I: I=-21; DM=-53; /M: SY='V'; M= 17,-418, 8, -17, 6, -88, -12, 45, -21, -50, -34, -65,-419, -13, -72, -24, -56, 62, -83, 27; /M: SY='N'; M= -78,-423, 70, 26,-425, -7, -72,-428, 21,-428,-420, 87,-416, -24, 4, -99,-403,-426,-433, -6; /M: SY='G'; M=-140,-423, -40, -75,-430, 102,-414,-436, -71,-433,-423, 35,-416,-118,-420, -23,-412,-431,-424,-424; /I: I=-22; MI=0; MD=-57; IM=0; DM=-57; /M: SY='Q'; M=-109,-423,-156, -13, -6, -59, -83, -49, 45, -1, 49, -28, -63, 57, 39, -23, -37, 25,-421, -49; /M: SY='W'; M= -46,-422,-426,-422, 67,-424,-410, -91, -44, 40, 48, 5,-132,-416,-104, -41, -52, -59, 93, 63; /M: SY='L'; M= -80,-420,-429,-422, -84,-432, -99, 47, -29, 60, -6,-424,-427,-416, 16,-419, -69, 50,-423, -42; /M: SY='C'; M=-410, 160,-430,-430,-420,-426,-430,-427,-426,-418,-418,-416,-441,-434,-432,-413,-410,-415,-450,-431; /M: SY='E'; M= -15,-426, 23, 78,-427, -30,-137, -34, -21,-123,-122, -9, 43, -61, -9, 24, -50,-100, -9,-123; /M: SY='D'; M= -63,-423, 68, 42, -86, -99, -5,-425, -14,-144,-116, 64,-415, -31, 22, 27, -53, -41,-436,-127; /I: I=-28; MI=0; MD=-71; IM=0; DM=-71; /M: SY='C'; M=-410, 160,-430,-430,-420,-426, -81,-427,-426,-418,-418,-416,-441,-433,-432,-413,-410,-415,-450,-431; /M: SY='R'; M= -8,-427, -5, -75,-113, -7,-101, -13, 27, -64, 26, -78,-421, -33, 91, -51,-116, -76, -90, 0; /M: SY='D'; M= -28,-426, 67, 64,-419, -20, 25, -75, -15,-105, -86, -16,-103, -40, -30, -13, -13, -60,-426, 35; /M: SY='E'; M= -27,-425, 20, 76, -5, -28,-409, -10, -56, -53, 44, -27,-415, -44, -67, 8, -41, -8,-427, -54; /M: SY='E'; M= -87,-432, -29, 57, -34, -42, -21, -3, -29, 26, 27, -73,-425, 5, -21, -17, -80, -57, -81, -47; /M: SY='E'; M= -71,-445, 4, 38,-112, 4, -65, -86,-133, -66, -56, -46, -80, -21, -15, -12, -31, -24, -60, -10; /M: SY='E'; M= -74,-451, -8, 15, -99, -2,-435, -29, -25, -31, -88,-121, -89, -53, -13, 4, -54, -92,-448, -1; /M: SY='E'; M=-119,-461, -15, 25, -57, -61,-441,-137, 5, -67, -37, -60, -60, -50, -50, -23, -61,-112,-457, -13; /I: E1=0; IE=-255; DE=-255;» more |
Numerical results [info]
| Total number of hits | 2 in 2 different sequences |
| Number of true positive hits | 2 in 2 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Archaea |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | DOMAIN |
| Feature description [info] | ACP-type MB |
| Version [info] | 3 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
2 sequences
Y525_METKA (P50100), Y653_METJA (Q58069)
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