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Entry: PS51928

General information about the entry

Entry name [info] COV_N_NTD
Accession [info] PS51928
Entry type [info] MATRIX
Date [info] 07-OCT-2020 CREATED;
07-OCT-2020 DATA UPDATE;
02-JUN-2021 INFO UPDATE.
PROSITE Doc. [info] PDOC51928
Associated ProRule [info] PRU01276

Name and characterization of the entry

Description [info] Coronavirus nucleocapsid (CoV N) protein N-terminal (NTD) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=124;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=119;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.9666626; R2=0.0087591; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=861; N_SCORE=10.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=404; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-38; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-380; BD=-380;
/M: SY='I';  M= -12, -79, -73, -71, -70,  16, -75,  38, -70, -44,   7,   8,  38,  16, -75, -10,  -8,  29, -84, -71;
/M: SY='P';  M= -69, -86,  25, -13, -35, -34,  26, -80, -62, -84, -74,  53,  84, -13, -70, -28, -18, -82, -85,  -1;
/M: SY='Y';  M=  32,  -4, -82, -76,  -7, -77, -68, -47, -76,  43, -48, -78, -29, -72, -76, -30, -63,  21, -66,  57;
/M: SY='S';  M= -46, -69, -61, -62, -80, -55, -64, -79, -62, -83, -76, -50, -69, -54, -67, 103, -41, -72, -88, -72;
/M: SY='W';  M= -37, -93, -98, -84,  30, -81, -37, -51, -78,   6, -64, -92, -86, -77, -79, -82, -82, -56, 152,  33;
/M: SY='F';  M= -80, -80, -89, -86, 103, -87, -63, -57, -80, -50, -56, -81, -91, -85, -77, -78, -73, -62,  31,  74;
/M: SY='Q';  M=  30, -75, -18, -56, -78, -64, -61, -72, -57, -25, -20,  33, -73,  69, -26,  26,  25, -68, -83, -27;
/M: SY='P';  M=   8, -87, -72, -66, -86,  30, -76, -37, -70, -82, -73, -71, 100, -71, -80, -19, -64, -27, -83, -84;
/M: SY='I';  M= -70, -78, -91, -86, -51, -94, -83,  74, -84,  53, -38, -85, -84, -79, -84, -80, -65,   8, -79, -61;
/M: SY='T';  M= -64, -76, -69, -35, -70, -80, -71,  20,  51, -32,  20, -62, -72, -59,  21, -59,  54,  13, -84, -68;
/M: SY='Q';  M=  30,   0,  -4, -39, -35, -38, -10,  -9, -63, -27, -59, -20, -76,  69, -65, -30, -35,  35, -84, -68;
/M: SY='Q';  M= -54, -79,   8,   9,  28, -74,  33, -61,  29, -72, -67,  17, -72,  45,  -2, -35,  42, -72, -80, -60;
/M: SY='Q';  M= -39, -79,  17, -55, -86,  32, -60, -82,  28, -83, -73,  53, -73,  56, -56,  20, -59, -40, -86, -74;
/M: SY='K';  M= -38, -81,  32, -11, -80,  16, -64, -78,  66,  -7, -69,  27, -24, -54, -31, -37, -50, -77, -84, -73;
/I:         I=-33; MD=-84;
/M: SY='K';  M= -30, -88, -39, -39, -93,  26, -39, -90,  54, -91, -80,  14, -21,  12, -58, -31,   5, -70, -91, -82; D=-33;
/I:         I=-33; MI=0; MD=-84; IM=0; DM=-84;
/M: SY='P';  M=   8, -81, -15,  -4, -82, -19, -64, -40,  23, -38, -69,  30,  53,  37, -13,   3, -60, -39, -84, -75;
/M: SY='F';  M= -52, -81,  33,  14,  57, -79, -69, -13, -68,   2, -62, -19,  53, -20, -74, -66,  13, -64, -73, -56;
/M: SY='W';  M= -26, -84, -82, -47,  51, -25,  10, -15, -74,   8, -59, -77,  23,  -2, -76, -42, -19, -43, 108,  16;
/M: SY='K';  M= -48, -83,  21, -12, -83, -53, -31, -38,  57, -42, -71,   6,  54, -21,  12,  -7, -18, -76, -85, -74;
/M: SY='F';  M= -17, -73, -80, -74,  64, -80, -24, -34, -20,   8, -52, -73, -81,  -5, -72,   3,   0,  48, -70, -49;
/M: SY='M';  M=   0,  17, -81, -51,  59, -79, -71,   9, -32,  13,  67, -29,  34, -73, -75, -45, -65, -37, -69, -51;
/M: SY='P';  M= -19, -88,  -6,  20, -86, -27, -22, -79,   8, -83, -73, -29,  89,  -9,  23, -51, -38, -45, -84, -78;
/M: SY='G';  M= -59, -81, -62, -66, -84,  70,  -4, -89,   9, -86, -74,  32, -74,   3,  37, -20, -25, -84, -82, -75;
/M: SY='N';  M= -63, -77,  41,   4, -84, -62, -54, -81, -54, -83, -74,  77, -23,  54, -60,  29,  -9, -80, -91, -39;
/M: SY='G';  M=  26, -76, -71, -76,   3,  78, -74, -78, -73, -17, -70, -60, -74, -70, -78,   1, -66, -73, -76, -72;
/M: SY='V';  M= -57, -71, -88, -82, -59, -89, -90, -23, -79, -44, -47, -83, -84, -82, -81, -71, -55,  98, -93, -66;
/M: SY='P';  M= -42, -95, -72, -60, -90, -73, -75, -78, -68, -68, -74, -78, 121, -71, -80, -68, -64, -82, -84, -87;
/M: SY='I';  M= -65, -77,  18, -40, -65, -81, -72,  49,  10,  -2, -53, -28, -74,  17, -21, -43,  39,  19, -85, -66;
/M: SY='N';  M=   7, -75, -55, -68, -83,  58, -61, -84, -31, -86, -75,  79, -74, -61, -36,   9, -39, -80, -87, -78;
/M: SY='K';  M=  -5, -78, -20,  17, -38, -46, -63,  -8,  39, -20,  37,  -8,  -6,  22, -40,  -9,   5, -30, -77,   5;
/I:         I=-36; MD=-90;
/M: SY='G';  M= -22, -78, -61, -72, -82,  75, -66, -87, -20, -87, -77,  53, -24, -65, -72,   6, -28, -82, -82, -24; D=-36;
/I:         I=-36; MD=-90;
/M: SY='V';  M= -54, -97, -59,-101, -80, -51,-103,  19,-100,   0,  -5, -99,-103, -98,-102, -22, -81,  39,-107, -87; D=-36;
/I:         I=-36; MI=0; MD=-90; IM=0; DM=-90;
/M: SY='P';  M= -65, -80,  38, -29, -85, -11, -62, -81,  40, -84, -74,  49,  60, -19, -57,  -3,  14, -79, -88, -76; D=-36;
/I:         I=-36; DM=-90;
/M: SY='K';  M=  14, -78, -63, -54, -81, -46, -15, -49,  69, -57, -68, -16,  57, -54, -26,  11,  -1, -71, -80, -72;
/M: SY='D';  M=   0, -75,  70, -17, -79, -29, -60, -45, -13, -79, -73,  20, -32,  -8, -63,  34,  29, -71, -88, -14;
/M: SY='Q';  M= -20, -84,  -2,  54, -15, -45,  30, -76, -17, -42,  -8, -57, -69,  88, -52, -40, -65, -76, -75,   6;
/M: SY='Q';  M=  13,  -5, -58,   8, -48, -27, -56, -75, -49, -24, -62,  22, -72, 101, -11, -35, -63, -74, -79, -67;
/M: SY='H';  M= -37, -16, -70, -67, -64, -81, 100,  63,  25, -53, -50, -61, -75, -61, -61, -67, -64,  10, -87, -54;
/M: SY='G';  M= -53, -80, -68, -80, -87, 100, -75, -95, -73, -90, -79, -54, -72, -71, -81, -53, -72, -88, -77, -82;
/M: SY='Y';  M= -75, -86, -74, -77, -22, -82, -40, -60, -69, -57, -53, -76, -87, -64, -66, -70, -69, -65, -31, 131;
/M: SY='W';  M= -79, -38,-106, -84, -44, -78,-103, -76, -76, -55, -76, -99, -83, -76, -79, -86, -90, -90, 173,  -6;
/M: SY='N';  M= -68, -77, -59, -42, -54, -71, -53, -11, -17,  12, -56,  74, -80, -58,  36, -42, -33, -22, -68,  64;
/M: SY='R';  M= -67,  -7, -58,  45, -76, -80, -58, -44,  15, -73,  -4, -61, -25,   7,  83, -64, -66, -19, -78, -13;
/M: SY='Q';  M=  -3, -82, -62, -49, -17, -32,  49, -74, -50, -43, -61, -33, -49,  98,   5, -36,   4, -74, -73,  19;
/M: SY='N';  M=  -5, -77, -21, -24, -37, -46,  -4, -29,  11, -74, -66,  50,  46,  32,  -4,   4,  15, -13, -85, -70;
/M: SY='R';  M= -49, -85, -67, -57, -78, -35, -57, -83, -30, -76,  -4, -60, -78, -46, 107, -63,  -7, -77, -80, -66;
/I:         I=-33; MI=0; MD=-84; IM=0; DM=-84;
/M: SY='W';  M= -80, -90, -89, -84,  65, -85, -74, -39, -35, -64, -67, -19, -89, -79, -49, -39, -12, -73, 117,  61; D=-33;
/I:         I=-33; DM=-84;
/M: SY='R';  M= -74, -89, -72, -60,   7, -84, -66, -37,  49, -78, -71, -65, -81,   9,  79, -45, -71, -41, -81, -67; D=-33;
/I:         I=-33; DM=-84;
/M: SY='M';  M= -68, -80, -77, -74, -19, -46, -70, -11, -71, -56,  93,   0,  35,  -3, -75, -23,  40, -23, -87, -68; D=-33;
/I:         I=-33; DM=-84;
/M: SY='R';  M=   3, -77, -65, -59, -78,  30, -65, -67,  18, -72, -65,  -7, -44,  37,  48, -18,   9,  17, -81, -70;
/M: SY='K';  M= -65, -82,  33, -50, -83,  17, -62, -85,  75, -83, -72, -21, -19, -49,  44, -59, -15, -80, -81, -71;
/M: SY='G';  M= -55, -82, -67, -77, -83,  93, -72, -91, -72, -88, -77, -17,  29, -70, -80, -54, -70, -86, -76, -16;
/M: SY='Q';  M= -61, -81, -44,  18, -85,  37, -59, -80,  43, -58, -68,  22, -69,  75, -33, -30, -40, -39, -79, -71;
/I:         I=-38; MD=-97;
/M: SY='R';  M= -65, -85, -66, -55, -82,  15, -19, -82,  18, -78, -15, -58, -41,  52,  82, -28, -24, -53, -80, -68; D=-38;
/I:         I=-38; MI=-97; MD=-97; IM=-97; DM=-97;
/M: SY='K';  M= -14, -76, -69, -45, -71, -78, -71, -26,  67, -33, -58, -63, -74, -17,  12, -62,   1,  51, -83, -68; D=-38;
/I:         I=-38; DM=-97;
/M: SY='P';  M= -45, -85,  59,  33, -49, -71, -59, -79, -16, -49, -71, -15,  68,  62, -59, -58, -28, -79, -85, -73; D=-38;
/I:         I=-38; DM=-97;
/M: SY='L';  M=  -9, -71, -83, -74, -48, -83, -17,   8, -50,  73, -36, -79, -82, -22, -28, -72, -62,  21, -76, -58;
/M: SY='P';  M=  -7, -81,  13, -57, -76, -46, -66, -67, -46,   4, -64,  24,  97, -25, -71,  -5, -27, -48, -83, -75;
/M: SY='P';  M= -15, -81,  21, -12, -84, -31, -66, -77, -61, -83, -73, -11,  98, -60, -71,  41, -16, -76, -84, -78;
/M: SY='R';  M=  17, -75, -61, -54, -44, -67, -59, -71,  50, -20, -63,  29, -72,  -9,  65,   5, -30, -29, -78, -66;
/M: SY='W';  M= -25, -93, -95, -80,  -2, -46, -86, -65, -74, -17, -66, -90, -81, -73, -76, -78, -80, -28, 162,  41;
/M: SY='Y';  M= -17, -80, -67, -67,  38, -75,  99, -66, -66, -59, -54, -61, -79, -60, -62, -16, -66, -68, -49,  99;
/M: SY='F';  M= -77, -73, -90, -85, 118, -85, -70, -50, -81, -21, -52, -79, -88, -91, -78, -76, -69, -35, -44, -22;
/M: SY='Y';  M= -73, -83, -72, -75, -22, -79, -40, -58, -67, -29, -51, -27, -85, -63, -65, -68, -67, -63, -31, 130;
/M: SY='Y';  M= -73, -83, -29, -74,  35, -80, -43, -58, -69, -28, -52, -74, -19, -65, -66, -69, -67, -63, -33, 124;
/M: SY='L';  M= -63, -69, -74, -71, -13, -79,   0, -44, -71,  66, -41, -67, -13, -68, -73, -18,  64, -48, -78, -58;
/M: SY='G';  M= -30, -76, -64, -74, -81,  99, -70, -87, -68, -50, -73, -51, -68, -65, -39,  -6, -65, -81, -74, -76;
/M: SY='T';  M= -35, -62, -57, -60, -67, -67,   2, -59, -57, -40, -59,  -7, -60, -61, -65, -28, 111, -52, -88, -64;
/M: SY='G';  M= -50, -76, -62, -74, -82, 100, -69, -90, -67, -86, -75,   6, -69, -65, -32, -49, -67, -84, -75, -77;
/M: SY='P';  M= -66, -90, -66, -55, -85, -39, -69, -74, -60, -83, -70, -71, 124, -65,  -5, -62, -26, -78, -79, -82;
/M: SY='H';  M=   4, -79, -57,   3,   5, -71, 118, -75, -51, -49, -56, -52, -71,   0,  37, -58, -65, -73, -72,  49;
/M: SY='A';  M=  78, -66, -25, -36, -74,   7, -36, -67,  14, -69, -63, -58, -14,  -5, -60,   9, -53, -24, -74, -14;
/M: SY='D';  M= -62, -76,  90,   6, -82, -11, -53, -46,  -7, -80, -75,  56, -67, -13, -22,   0,  -8, -76, -93, -70;
/M: SY='L';  M=  51, -67,   4, -25, -57, -66, -16, -47,  -4,  55, -45, -65, -73, -60, -65,   4, -56,  -8, -76, -61;
/M: SY='K';  M=  -5, -76, -33, -47, -79, -64,  10, -77,  73, -77, -66,   4,  46,  25,  21,  25, -43, -73, -77, -66;
/M: SY='Y';  M= -74, -79, -81, -79,  88, -79, -54, -55, -72, -49, -53, -77, -84, -73, -70, -72, -69, -61,  96,  99;
/M: SY='R';  M= -40, -79, -62, -62, -79,  75, -61, -85,  -3, -61, -69, -11, -71, -31,  76, -54, -66, -79, -75, -70;
/M: SY='E';  M= -26, -75,  31,  67, -80, -68,  -7, -75,  12, -73, -67, -49, -16,  53, -51,   3,  46, -70, -82, -68;
/M: SY='R';  M= -12, -76,   3, -12, -16, -34, -57, -53,  31, -27, -61, -23, -24,  12,  76,   6, -11, -15, -76, -62;
/I:         I=-45; MI=0; MD=-115; IM=0; DM=-115;
/M: SY='I';  M= -37, -74, -66, -62, -60, -74,  17,  53,   0,  11,  17,  19,  23,  39, -42, -32,  20,   5, -78, -60;
/M: SY='D';  M= -48, -82,  83,  53, -84, -68, -23, -79, -52, -49, -73, -17,  64,  17, -61, -57, -58, -60, -88, -72;
/I:         I=-42; MI=0; MD=-106; IM=0; DM=-106;
/M: SY='G';  M= -54, -78,  31, -66, -77,  89, -64, -87, -65, -84, -75,  15, -70, -64, -35, -25, -65, -83, -75,   7;
/M: SY='V';  M= -58, -72,   1, -42, -57, -86, -84,  46, -76, -30, -45, -76, -79, -76, -78, -69, -55,  86, -87, -63;
/M: SY='F';  M= -64, -73, -79, -78,  65, -58, -33,   8, -74, -12, -49, -25, -81, -75, -74, -24,   4,  54, -59,  54;
/M: SY='W';  M= -77,-102,-100, -78, -45, -76,-100, -76, -25, -74, -75, -94, -27, -21, -74, -82, -87, -90, 173, -31;
/M: SY='V';  M= -20, -69, -32, -44, -58, -50, -85, -24, -75, -44, -47, -77, -80, -77, -77, -66, -53,  97, -90, -65;
/M: SY='A';  M=  74, -68, -64, -60, -76,   5, -67, -71,  27, -73, -66,   7, -69, -58, -60,   6, -13, -46,  -8, -33;
/M: SY='T';  M=  -2, -72, -35, -12, -72, -20,  -6, -36,  33, -66,  -5,  20, -69,  -7,   4,  19,  39,  26, -84, -67;
/M: SY='D';  M= -38, -79,  45,  38, -83, -36,  22, -82,  32, -80, -71,  39,  -1,  38,   2,  -2, -22, -78, -86, -69;
/M: SY='G';  M= -55, -79,  -9, -28, -83,  83, -34, -30, -64, -81, -72,  22, -36,  24, -30, -29, -65, -42, -79, -75;
/M: SY='A';  M=  86, -64, -68, -63, -77, -20, -71, -66, -65, -69, -64, -61, -68, -61, -69,  15,   5, -22, -80, -73;
/I:         I=-36; MI=0; MD=-90; IM=0; DM=-90;
/M: SY='K';  M= -62, -75,  16, -55, -68, -75, -67,  14,  67, -19,  13, -57, -35, -11, -25, -18,  18,  27, -81, -65;
/M: SY='T';  M= -29, -70,  16, -13, -72, -17, -13, -20,   1, -18, -63,  53, -68, -58, -41,   1,  69, -38, -88, -68;
/M: SY='T';  M=  20, -72, -12,  35, -75, -67, -64, -33,  30, -55, -65, -25, -66,  -5,  -1,  29,  36,  -4,   4, -68;
/M: SY='P';  M= -51, -85, -14, -58, -79, -38, -68, -27, -16, -20, -65,   7, 103, -18,  -4, -17, -60, -22, -82, -77;
/M: SY='T';  M=   3, -68, -25, -63, -73,   0, -69, -65, -18, -43, -65, -53, -14, -62, -67,  42,  81, -19, -87, -70;
/M: SY='D';  M= -34, -77,  57, -55, -83,  40, -61, -83,  -8, -61, -76,  49, -14, -58, -34,  36, -20, -79, -89, -75;
/I:         I=-29; MI=0; MD=-75; IM=0; DM=-75;
/M: SY='L';  M= -38, -75, -81, -76,  15, -84,   5,   0, -74,  52,  37, -23, -83,   1, -73, -73, -64,  28,   7,  30;
/M: SY='G';  M=   9, -78, -40, -72, -83,  81, -73, -77, -69, -80, -72, -58,  12,  -7, -35, -27, -66,  -2, -80, -78;
/M: SY='T';  M= -16, -70, -12, -23, -71, -70,  -5, -57,  13, -66, -63,  -2, -14, -61, -63,  16,  72,  30, -88, -31;
/M: SY='R';  M= -71, -87, -67, -55, -79, -81, -56, -85, -28, -54, -67, -60, -79, -44, 112, -65, -69, -79, -79, -66;
/M: SY='N';  M= -39, -79,  54, -28, -84,  -1, -24, -84,  45, -60, -75,  55, -30, -53,  11,   7, -59, -81, -89, -73;
/M: SY='P';  M=   2, -84, -67, -33, -84, -72, -68, -77,  21, -81, -71, -65,  85, -58,  50,  -5, -11, -40, -83, -77;
/M: SY='N';  M= -10, -73,  34, -58, -83,   5, -56, -81, -42, -85, -75,  87, -73, -23, -65,  35,  -5, -78, -94, -75;
/M: SY='N';  M=  -5, -76, -44,   1, -80, -67, -60, -23,  48, -76, -67,  57, -71,  45, -32,   6,  14, -32, -85, -71;
/M: SY='D';  M= -54, -85,  62,  44,  22, -59,  36, -81,  13, -77, -73, -54,  30,  13, -59, -34, -64, -80, -81, -19;
/M: SY='P';  M=  -1, -81,  17,  12, -78, -70, -68, -70,  -7,  -2, -32, -63,  76,  -2, -67,  14,   6, -53, -85, -75;
/M: SY='I';  M=  30, -78, -69,  -3, -68, -50,  25,  39,   3,   5,  10, -23, -42,  31,   4, -62, -49, -45, -81, -65;
/M: SY='I';  M=  -4, -79,  -4,  16,  -1, -80, -71,  47, -25, -17, -55, -52, -14,  -6,  14, -29, -14,  13, -78,  -9;
/M: SY='P';  M= -19, -88, -76, -66, -28, -76,  -4, -62, -71,   5, -63, -79, 105, -73, -80, -69, -64,   5, -83, -76;
/I:         I=-38; MI=0; MD=-97; IM=0; DM=-97;
/M: SY='R';  M= -50, -84, -60,  16, -82, -77,  13, -19,  42, -76, -67,   4, -73,  50,  59, -61,  -7, -36, -83, -69;
/M: SY='F';  M= -80, -77, -92, -87, 109, -89, -73, -31, -83,   8, -53, -83, -42, -54, -81, -80, -72, -57, -50, -29;
/M: SY='P';  M=  14, -78,  27, -58, -84, -40, -65, -60, -16, -83, -75,  31,  60, -60, -12,  50, -35, -75, -89, -77;
/M: SY='P';  M= -34, -31,   1,   1,  10,  -6, -29, -15, -64, -51, -65, -65,  60,  41, -52, -24,  19,   6, -82, -68;
/M: SY='G';  M= -25,  -7, -20, -28, -87,  67, -69, -89,  44, -86, -76, -13,  -6,  18, -39, -42, -49, -83, -81, -78;
/M: SY='L';  M= -33, -76,  27, -48, -61,  -4, -74,  10, -42,  48, -50, -68, -79, -72, -77, -66,  33,   0, -85, -67;
/I:         I=-36; MI=0; MD=-90; IM=0; DM=-90;
/M: SY='P';  M= -72, -97, -71, -29, -92, -36, -75, -81, -68, -90, -77, -31, 118, -71, -80, -69, -65, -85, -86, -89;
/M: SY='N';  M=  17, -79,  30, -28, -83,  -9, -63, -77,  24, -41, -71,  39,  -6,  34,  -8,   2, -30, -40, -87, -74;
/M: SY='G';  M= -35, -81,  29,  -7, -88,  63, -64, -87, -63, -87, -78,  53, -34,  22, -70, -21, -65, -51, -88, -79;
/M: SY='F';  M= -68, -27, -80, -82,  49,   2, -73,  31, -78,   3, -53,  14, -84, -77, -79, -23, -64,  33, -68,  32;
/M: SY='Y';  M= -71, -83, -39,  36,  50, -81,  -1, -70,  10, -66, -64, -66, -77,  10,   7, -36,   4, -55, -59,  69;
/M: SY='I';  M= -22, -80, -85, -78,  -7, -88, -81,  60, -67, -11, -50, -78, -12, -72,  37, -73, -64,  46, -82, -64;
/M: SY='W';  M= -24, -82, -28,  60, -70, -82, -72, -14, -62, -33, -62, -71, -73,  29, -67, -51, -22,  45,  71, -66;
/M: SY='E';  M= -64, -84,  48,  57, -86,  28, -64, -84, -56, -82, -36, -14, -26,  -2,  -6, -19,   2, -41,  -4, -76;
/I:         E1=0; IE=-380; DE=-380;
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2021_03 which contains 565'254 sequence entries.


Total number of hits 64 in 64 different sequences
Number of true positive hits 64 in 64 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Taxonomic range [info] Eukaryotic viruses
Maximum number of repetitions [info] 1
Feature key [info] DOMAIN
Feature description [info] CoV N NTD
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
64 sequences

NCAP_BC133  (Q0Q4E6    ), NCAP_BC279  (Q0Q468    ), NCAP_BC512  (Q0Q462    ), 
NCAP_BCHK3  (Q3LZX4    ), NCAP_BCHK4  (A3EXA1    ), NCAP_BCHK5  (A3EXD7    ), 
NCAP_BCHK9  (A3EXH0    ), NCAP_BCRP3  (Q3I5I7    ), NCAP_CVBEN  (Q91A22    ), 
NCAP_CVBF   (P19902    ), NCAP_CVBLS  (Q9QAR1    ), NCAP_CVBLU  (Q8V432    ), 
NCAP_CVBLY  (Q9QAR8    ), NCAP_CVBM   (P10527    ), NCAP_CVBOK  (P26020    ), 
NCAP_CVBQ   (P59712    ), NCAP_CVCAI  (P36298    ), NCAP_CVCAK  (Q04700    ), 
NCAP_CVCBG  (Q7T6S8    ), NCAP_CVEN9  (Q9DQX6    ), NCAP_CVH22  (P15130    ), 
NCAP_CVHN1  (Q5MQC6    ), NCAP_CVHN2  (Q14EA6    ), NCAP_CVHN5  (Q0ZME3    ), 
NCAP_CVHNL  (Q6Q1R8    ), NCAP_CVHOC  (P33469    ), NCAP_CVM1   (P18446    ), 
NCAP_CVM2   (Q9PY96    ), NCAP_CVM3   (P18447    ), NCAP_CVMA5  (P03416    ), 
NCAP_CVMDV  (Q83360    ), NCAP_CVMJH  (P03417    ), NCAP_CVMS   (P18448    ), 
NCAP_CVP67  (Q8BB23    ), NCAP_CVPFS  (P05991    ), NCAP_CVPIA  (Q8JSP4    ), 
NCAP_CVPPU  (P04134    ), NCAP_CVPR8  (P33463    ), NCAP_CVPRM  (P24411    ), 
NCAP_CVPV   (P59713    ), NCAP_CVRNJ  (Q9WCD0    ), NCAP_CVRSD  (Q02915    ), 
NCAP_CVTIN  (Q9PZ51    ), NCAP_CVTMI  (Q9PZ50    ), NCAP_CVTNC  (Q9PZ49    ), 
NCAP_FIPV   (P25909    ), NCAP_IBVAR  (Q64960    ), NCAP_IBVB   (P69596    ), 
NCAP_IBVBC  (P69597    ), NCAP_IBVBU  (P69598    ), NCAP_IBVD1  (Q9J4A3    ), 
NCAP_IBVDE  (Q9J4B0    ), NCAP_IBVG   (P32923    ), NCAP_IBVH1  (Q98WJ7    ), 
NCAP_IBVH5  (Q98Y32    ), NCAP_IBVK   (P12648    ), NCAP_IBVM   (Q82616    ), 
NCAP_IBVSA  (Q8JMI6    ), NCAP_IBVV1  (Q96605    ), NCAP_IBVVI  (Q96598    ), 
NCAP_MERS1  (K9N4V7    ), NCAP_PEDV7  (Q07499    ), NCAP_SARS   (P59595    ), 
NCAP_SARS2  (P0DTC9    )
» more

PDB
[Detailed view]
26 PDB

1SSK; 2BTL; 2BXX; 2C86; 2GEC; 2OFZ; 2OG3; 3HD4; 4J3K; 4KXJ; 4LI4; 4LM7; 4LM9; 4LMC; 4LMT; 5N4K; 6KL2; 6KL5; 6KL6; 6M3M; 6VYO; 6WKP; 6YI3; 7ACS; 7ACT; 7CDZ
» more

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View entry in raw text format (no links)
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