ProRule PRU01276
View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU01276
General rule information
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| Accession | PRU01276 |
| Dates | 24-JUN-2020 (Created)
-- (Last updated, Version 1) |
| Data class | Domain; |
| Predictors |
PROSITE; PS51928; COV_N_NTD |
Name | Coronavirus nucleocapsid (CoV N) protein N-terminal domain (NTD) |
| Function | CoV N proteins contain two structured domains: the N-terminal domain (NTD; also called RBD), which is responsible for RNA binding, and the C- terminal domain (CTD; also called DD), which mediates oligomerization and RNA binding. |
| Scope(s) |
Viruses Riboviria |
| Example(s) | Q64960 (NCAP_IBVAR); |
Propagated annotation
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Keywords
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Gene Ontology
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| GO:0019013; Cellular component:viral nucleocapsid |
| GO:0003723; Molecular function:RNA binding |
Features
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| From: PS51928 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| DOMAIN | from | to | /note="CoV N NTD #" | |||||||||
Additional information
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| Size range | 120-135 amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 1 |
| Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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- UniProtKB/Swiss-Prot sets
Viruses [64] All [ 64 ]
- Retrieve set of proteins with 3D structure for this domain