Home  |  Contact
Entry: PS51962

General information about the entry

Entry name [info] COV_NSP1
Accession [info] PS51962
Entry type [info] MATRIX
Date [info] 02-JUN-2021 CREATED;
02-JUN-2021 DATA UPDATE;
02-JUN-2021 INFO UPDATE.
PROSITE Doc. [info] PDOC51962
Associated ProRule [info] PRU01307

Name and characterization of the entry

Description [info] Coronavirus (CoV) Nsp1 globular domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=127;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=122;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.5921385; R2=0.0084102; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=881; N_SCORE=10.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=465; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-38; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-380; BD=-380;
/M: SY='R';  M=  20, -72, -66, -61,   3, -68,  32, -60, -54,  19, -53, -60,  34, -57,  42,  15,  33, -58, -68,  35;
/M: SY='H';  M= -55,  29,  22,  22, -68, -64,  64, -30,   5, -68, -62, -49, -67,  19, -56,  58,   4,  -2, -80,  12;
/M: SY='N';  M= -60, -70,  58, -50, -75, -58, -51, -64,  16, -74, -67,  94, -71, -52, -56,   5, -49,  20, -93, -69;
/M: SY='H';  M= -66, -81, -55, -48, -72, -70, 127, -77, -50, -65,  35, -47, -69,  78,   2, -56, -65, -78, -89, -44;
/M: SY='V';  M= -56, -67, -84, -78,  27, -85, -81,   5, -76,  17, -40, -79, -80, -77, -76, -68, -54,  90, -78, -54;
/M: SY='S';  M=  13, -67, -61, -56, -69, -62, -61, -60,  41, -63,  51, -52, -66, -51,  22,  58,  37,  -1, -79, -64;
/M: SY='C';  M= -62,  60, -82, -77, -49, -84, -76,  42, -76,  59, -37, -76, -80, -73, -77, -69,   9,  40, -78, -59;
/I:         I=-24; MD=-60;
/M: SY='T';  M=  30, -82, -79, -74, -83, -79, -83, -74,  -7,  -4, -71, -74,  43, -75, -78, -62,  55, -69, -94, -83; D=-24;
/I:         I=-24; MD=-60;
/M: SY='V';  M= -14, -81, -97, -91,  23, -95, -94, -40, -89,  -9, -58, -92, -94, -91, -90, -80, -68,  74, -91, -68; D=-24;
/I:         I=-24; MI=0; MD=-60; IM=0; DM=-60;
/M: SY='A';  M=  40, -82, -82, -83,  10, -79, -85, -68, -81, -76, -75,  26, -89, -82, -86, -66,  24,  20, -95, -78; D=-24;
/I:         I=-24; DM=-60;
/M: SY='D';  M=  -5, -78,  70,  34, -84,  -9, -56, -84, -50, -82, -76,  41, -69, -51,  34,  17, -57, -78, -90, -73; D=-24;
/I:         I=-24; DM=-60;
/M: SY='C';  M= -68, 100,  96, -46, -84, -69, -62, -86, -63, -82, -80,  19, -76, -64, -71, -60, -60, -79,-105, -76; D=-24;
/I:         I=-24; DM=-60;
/M: SY='M';  M= -17, -75, -68,  -8, -60, -71, -61, -55, -54, -16,  53, -64,  17, -56,  48,  41, -56,  22, -73,  36; D=-24;
/I:         I=-24; DM=-60;
/M: SY='C';  M=  11,  51, -56,  43, -70, -70, -59, -63, -47,  11, -57,  16,  13,  35,  50, -57, -59,  -9, -79, -67;
/M: SY='I';  M= -60,  34, -82, -78, -49, -83, -78,  58, -76,  46, -37, -76, -79, -73, -77,  -9, -56,  55, -78, -58;
/M: SY='S';  M= -58,  36, -60, -57, -66, -66, -60, -63,  36,  24, -56,  29,  29, -53,  34,  40,  10, -62, -79, -65;
/M: SY='G';  M=  40, -71, -68, -67, -69,  65, -71,  -4,  18,   4, -57, -59, -70, -63, -65, -53, -60,  10, -75, -69;
/M: SY='W';  M= -61, -74, -67, -59,  60, -69, -63,  -9, -60,   1, -55,   5,  30,  62, -63,  22,  25, -59,  65, -46;
/M: SY='G';  M= -55, -79,  13,  60, -83,  63, -63, -84, -56, -82, -74, -53,  52, -52, -65,  15, -60, -79, -79, -76;
/M: SY='W';  M= -68,  94,  35, -68,  41, -74, -74,   2, -70,   0, -60,  11, -81, -72, -75, -68, -66, -62, 120, -46;
/M: SY='C';  M= -14,  93, -70, -67,  47, -15,  47, -67, -68, -15, -61, -61,  51, -67, -71,  39, -56, -65, -75, -55;
/M: SY='V';  M= -55, -69, -70,  20,  -5, -80, -75,  40, -67, -43,  29, -69, -72, -66, -71, -10,  21,  73, -80, -59;
/M: SY='Q';  M= -18, -81,  45,  57, -80, -70, -55, -10, -45, -70, -63, -53,   6,  79,  22, -55, -60, -16, -80, -67;
/M: SY='S';  M= -10, -72,  25,  54, -79,  30, -59, -80,   1, -79, -72, -48, -62, -47, -58,  69, -49, -72, -81, -70;
/I:         I=-16; MD=-41;
/M: SY='E';  M=   4, -87, -61,  54, -88, -79, -72, -79, -66, -20, -76,  24, -79,  10, -73,  17, -68, -17, -96, -83; D=-16;
/I:         I=-16; MD=-41;
/M: SY='L';  M= -85, -96, -99, -98, -82,-101, -97,  11, -97,  23, -71, -91,-100, -92, -99,  18,  23, -70,-106, -88; D=-16;
/I:         I=-16; MI=0; MD=-41; IM=0; DM=-41;
/M: SY='A';  M=  90, -62, -70, -63, -71, -54, -72, -52, -65, -60, -57, -65, -68, -62, -69, -45, -52,  36, -78, -69;
/M: SY='L';  M= -64, -71, -74,  12,  34, -83, -64, -35, -71,  63, -38, -77, -80, -67, -71, -71, -61,  37, -62,  46;
/M: SY='Q';  M= -29, -74, -51,  30, -78, -63, -54, -67,   2, -70, -62,  35, -66,  80,  24,  43, -52,   5, -79, -65;
/M: SY='Y';  M= -61, -75, -55,  50,  26, -73,  30, -59, -53,  -2, -55, -59, -69,  40,   0,  18,  -2,  -6, -62,  58;
/M: SY='Y';  M=  34, -71, -71, -68, -51,   8, -63,  16, -60, -54, -52, -64, -73, -63,  24, -55,  18,  43, -63,  64;
/M: SY='S';  M= -52, -72, -53,  22, -77, -60, -57, -78,  62, -77, -68, -48, -64, -43,  36,  75, -47, -71, -78, -66;
/M: SY='E';  M=  44, -72,   1,  60, -68, -62, -56, -71, -51, -70, -64, -55, -63,  42, -57,  21,  18, -64, -71,  36;
/M: SY='H';  M=  46,  54, -70, -62, -65, -67,  63,  21, -63, -53,  31, -62, -72,  44, -64, -55, -57,  38, -82, -60;
/M: SY='L';  M=  31, -68, -79, -73, -43, -75, -65, -37, -73,  72, -36, -77, -80, -68, -72, -66, -60,  11, -66,  37;
/M: SY='K';  M=   6, -71, -65, -55, -67, -69, -64, -51,  64, -14, -56, -58, -70, -51,  43,  18, -54,  45, -78, -64;
/M: SY='N';  M= -56, -70,   0,  24, -77, -60, -54, -74,  46, -76, -67,  67, -64,  13, -48,  36,  44, -69, -84, -68;
/M: SY='G';  M= -55, -79, -63, -62, -82,  79, -68, -83,  36, -83, -72, -54,  65, -61, -61, -53,  -9, -79, -75, -76;
/M: SY='F';  M= -57, -71, -60,  27,  69,  14, -65, -64, -61, -62, -62, -57,  34, -61, -67,  32,  53, -62, -66, -49;
/M: SY='C';  M=   3,  68,  18,   2, -72, -70, -62, -67,  54,   2,  18, -57,  42,  11,   2, -59, -59, -65, -79, -68;
/I:         I=-45; MD=-115;
/M: SY='G';  M=   7, -88, -75, -70, -88,  57, -75,   8, -65, -80, -73, -66, -80,  54,  19, -62, -74, -75, -85, -79; D=-45;
/I:         I=-45; MI=-115; IM=-115; DM=-115;
/M: SY='C';  M= -65,  83, -82, -78, -44, -83, -66,  31, -75,  61,  54, -76, -82, -71, -75, -72, -62, -41, -69,  37;
/M: SY='V';  M= -56, -70, -73, -67, -56, -74, -68,  16, -57,  32, -45, -66, -75, -60,  47,  42, -52,  54, -79, -60;
/M: SY='F';  M= -69, -74, -70,  28,  94, -81, -63,   2,  12,   7, -50, -71, -77, -67, -64, -69, -64, -20, -51,  25;
/M: SY='V';  M= -53, -69, -68,  20, -59, -77, -72, -31, -64,   2, -46, -69, -73,  33, -67,  11, -52,  83, -83, -62;
/M: SY='P';  M=  42, -77, -59,  30, -81, -60, -66, -73, -58, -77, -68, -63,  96, -56, -67,  29, -53, -69, -79, -76;
/M: SY='W';  M= -65,  58, -69,  16,   5, -78, -63,   0,  27,  33,  54, -68, -74,  14, -58, -67, -63, -54,  78,  26;
/M: SY='H';  M= -11, -77,  23, -60, -52,  42,  80, -73, -59, -68, -60, -52, -71, -57,   4, -54,  19, -71, -61,  79;
/M: SY='M';  M= -59,  34, -74, -69, -52, -76, -67, -37,  -4,  52,  55,  -6, -77, -64, -12,  11, -55,  45, -78, -59;
/M: SY='Q';  M=   9, -74, -65, -52, -63, -70, -58, -57,   1,  44, -48, -60, -73,  74,  50,   3, -59, -58, -73, -60;
/I:         I=-36; MD=-90;
/M: SY='D';  M= -87,-104,  66, -67,-105,  13,  35,-110, -73,-104, -97, -66, -93, -76,  23, -79, -86,-106,-114, -88; D=-36;
/I:         I=-36; MD=-90;
/M: SY='C';  M=  36,  55, -95, -90,   2, -88,  30, -82, -91,  -4, -77, -87, -98, -89, -93, -77, -11, -78,-100, -80; D=-36;
/I:         I=-36; MI=0; MD=-90; IM=0; DM=-90;
/M: SY='M';  M= -83, -96,  20, -14, -88, -97, -88,  -7, -85, -75,  52, -82,  15, -84, -91, -81,  23,   8,-108, -87; D=-36;
/I:         I=-36; DM=-90;
/M: SY='G';  M= -55,  53, -65, -65, -81,  78, -67, -85,  20, -82, -71, -54,  43, -60,  28, -54, -65, -79, -76, -75;
/M: SY='C';  M= -62,  58,   4, -63,  31,   5,  58,  36, -65, -19, -51,  -4, -75,  47, -66, -61, -60,  25, -76, -53;
/M: SY='L';  M= -15, -70, -64,  -9,  24, -71, -60, -48, -60,  60, -44,  47, -11, -60,  20,   2, -57, -53, -72, -55;
/M: SY='P';  M= -64, -86,  40,  31, -85,  -3, -63, -78,  16, -83, -72, -59, 103, -56, -62, -60, -59, -79, -81, -78;
/M: SY='D';  M= -60, -79,  70,  -3, -84,  42, -56, -83,  48, -81, -72,  17, -66,  48, -49, -53, -59, -80, -82, -70;
/M: SY='P';  M= -61, -80,  38, -54, -80,  36,  50, -77, -57, -79, -69, -53,  84, -60,   8, -54,  36, -75, -84, -70;
/M: SY='Y';  M= -24, -81, -72, -67, -37, -76, -51, -57, -53, -59, -55, -70,   8, -58,  54, -65, -64,  15,  83, 102;
/M: SY='V';  M=   8, -65, -78, -73, -57, -77, -82, -24, -71, -43, -45, -72, -75, -74, -74, -59,  25,  94, -87, -63;
/M: SY='M';  M= -66, -74, -81, -77,  41, -80, -55,  46, -70, -35, 110, -73, -76, -65, -68, -71, -62, -41, -54,  72;
/M: SY='G';  M= -13, -72, -72, -75, -60,  68, -72,  27, -72,  38, -49, -62, -72, -69, -76, -57,   8, -11, -74, -65;
/M: SY='V';  M= -60, -70,   9, -66, -52, -81, -71,   1,  26,  53, -40, -70, -77, -66, -63, -68, -57,  62, -79, -59;
/I:         I=-23; MD=-58;
/M: SY='F';  M= -69, -77, -62,  49,  70, -82,  25, -12, -56,   1, -57, -66, -74, -58,  33, -65,  19, -60, -66, -46; D=-23;
/I:         I=-23; MD=-58;
/M: SY='R';  M= -78,-100, -83, -79,-100,  50, -81,-106,  14,-101, -89, -72, -90, -71,  57, -75, -86,-100, -95, -90; D=-23;
/I:         I=-23; MI=0; MD=-58; IM=0; DM=-58;
/M: SY='R';  M= -69, -83, -65, -64, -83, -76, -64, -80,  -1, -82, -73,  45, -80, -56,  75,  11,  19, -19, -91, -75; D=-23;
/I:         I=-23; DM=-58;
/M: SY='Y';  M= -72, -83, -75, -74,   6,   6,  25, -65, -66,  20, -60,   3, -84,   9,  23, -68,  16, -22, -75,  34; D=-23;
/I:         I=-23; DM=-58;
/M: SY='C';  M= -66,  53, -74, -68,   1, -80, -76,  13,  26, -68, -66, -65, -78,  33, -65,  17,  40,  -8, -87, -70; D=-23;
/I:         I=-23; DM=-58;
/M: SY='S';  M=  -6, -67, -68, -67, -58,  15, -67, -48, -67,  47, -48, -59, -71, -62, -69,  58,  19,  15, -78, -62;
/M: SY='C';  M= -61, 103,  57, -57,   1,  14, -67,   0,  12, -67, -66, -54, -75, -64,  -5, -11, -59, -11, -85, -67;
/M: SY='N';  M=  45,  29, -57,   1, -66, -60, -59, -63, -54,  -1,  28,  67, -71, -55,  18, -51,   2, -61,  64, -63;
/I:         I=-38; MI=0; MD=-97; IM=0; DM=-97;
/M: SY='Y';  M= -66, -79, -58,  17,  12, -73,  32, -67,  32, -29, -56,   6, -73,  40,  39, -60, -62, -68, -53,  84;
/M: SY='C';  M=  -4,  85, -75, -71,   8, -11, -72,  17, -70,   3,  31, -66,  29, -70, -74,  12,  -5,  23, -78, -62;
/M: SY='V';  M=  25, -66,  24, -63, -62, -16, -70, -42, -65,   6,  24, -59, -70, -65, -70, -12,  49,  54, -83, -64;
/M: SY='N';  M= -61,  54, -13, -61, -62, -69,  47, -54,  -6,   0, -56,  55,  47, -61, -63, -57,  19,  29, -81,  14;
/I:         I=-33; MD=-84;
/M: SY='H';  M= -75, -79,  22, -65,  73, -77,  85, -66,  -8,   0, -59,  32, -81, -67, -66, -68, -68, -70, -71, -42; D=-33;
/I:         I=-33; MD=-84;
/M: SY='G';  M=   6, -76,   0, -66, -76,  52, -70, -72,  18,  -5,  26, -58, -72, -64, -66,  16,  19, -69, -82, -73; D=-33;
/I:         I=-33; MD=-84;
/M: SY='H';  M= -67, -83,  40,  17, -72, -73, 105, -79, -63, -75, -68, -53, -73, -55, -63,  26, -64, -13,  64,  -9; D=-33;
/I:         I=-33; MD=-84;
/M: SY='R';  M= -65, -80, -72, -64, -72, -80, -67, -50,   0, -60,  45,   7,  29,  21,  53, -66, -62,  52, -86, -68; D=-33;
/I:         I=-33; MD=-84;
/M: SY='P';  M=  32, -85, -76, -69, -92, -13, -78, -83, -72, -87, -78, -71,  70,  12, -79,  14,  17, -78, -91, -86; D=-33;
/I:         I=-33; MI=-84; IM=-84; DM=-84;
/M: SY='F';  M= -13, -71, -72, -68,  43, -75, -62,   7, -64,  19,  20,   9, -76,  16,  -7, -61,  18,  35, -63,  42;
/I:         I=-19; MD=-47;
/M: SY='Q';  M=   8, -88, -77, -65, -85, -80,  14, -71, -63, -19, -68, -71, -85,  67,  22,  10, -70,   9, -92, -75; D=-19;
/I:         I=-19; MD=-47;
/M: SY='E';  M= -12, -86, -72,  44, -67, -90, -74, -64, -74,  35,  24, -80, -83, -68, -78, -74,  15, -66, -84,  15; D=-19;
/I:         I=-19; MD=-47;
/M: SY='Y';  M= -15, -86, -87, -82,  26, -89, -71, -62, -80,  26,  24, -83, -91,  11, -80, -75,  15, -65, -68,  59; D=-19;
/I:         I=-19; MD=-47;
/M: SY='M';  M=  -7, -82, -75, -78, -73, -79, -71, -63, -71, -69,  51,  44, -85, -72,  -4,  -3,  19,  20, -90,  16; D=-19;
/I:         I=-19; MD=-47;
/M: SY='M';  M=  30, -82, -86, -81,  22, -81, -84,  17,  -6, -63,  34, -78, -85, -77, -79,  -3,  -3,   9, -86, -69; D=-19;
/I:         I=-19; MD=-47;
/M: SY='D';  M= -14, -90,  58,  30, -97,   5, -71, -94, -66, -92, -86, -60, -78,  33, -73,  -2,  -4, -88, -99, -84; D=-19;
/I:         I=-19; MD=-47;
/M: SY='P';  M= -13, -92, -76,  13, -83, -14, -78, -75,   1,  17, -14, -79,  59,  14, -74, -74, -75, -77, -90, -82; D=-19;
/I:         I=-19; MD=-47;
/M: SY='D';  M=   6, -98,  61,  17,-103, -87, -81, -92, -78, -97, -94,  10, -90, -76, -86, -76, -79, -14,-114, -94; D=-19;
/I:         I=-19; MD=-47;
/M: SY='G';  M= -73,-101, -88,-100,-107,  79, -95,-115, -94,-110, -99, -74, -92, -91,-101, -73, -92,-108, -98,-102; D=-19;
/I:         I=-19; MD=-47;
/M: SY='V';  M= -14, -91,-102, -97, -80, -99,-104,  18, -96, -67, -69, -95, -99, -95, -98,  -7, -74,  60,-107, -86; D=-19;
/I:         I=-19; MD=-47;
/M: SY='C';  M= -16,  84, -94, -83, -92, -97, -89, -10, -79, -21, -79, -87,-102,  46,   5, -83, -85, -81,-105, -91; D=-19;
/I:         I=-19; MD=-47;
/M: SY='Y';  M= -89, -97,-101,-100,  20, -17, -79, -67, -95,  11,  27, -97,-104, -92, -94, -92, -87,  -9, -73,  63; D=-19;
/I:         I=-19; MD=-47;
/M: SY='G';  M= -74, -98, -89, -98,-101,  70, -93,-101, -92, -97,  25, -75, -91, -90, -98, -73,  -4, -98, -99, -97; D=-19;
/I:         I=-19; MD=-47;
/M: SY='R';  M=   6, -95, -81, -79, -98, -88, -80, -96, -62, -96, -87,  26, -94, -72,  59, -72,  25, -89,-105, -90; D=-19;
/I:         I=-19; MD=-47;
/M: SY='G';  M= -73, -93, -86, -91, -95,  47, -91, -94, -88, -26, -88, -74, -90, -85, -94,  25,  26, -90,-102, -93; D=-19;
/I:         I=-19; MI=0; MD=-47; IM=0; DM=-47;
/M: SY='N';  M= -58, -75,  22, -57, -75,  56, -54, -72, -52, -69,  64,  67, -70,  39,  21, -52, -59, -72, -81, -67;
/M: SY='F';  M= -11, -70, -73, -12,  70, -78, -68,  22,  21,  35, -45, -68, -75, -67, -63, -64,  19,  -5, -62, -44;
/M: SY='H';  M= -62,  23, -65, -57, -11, -75,  59,  14,  21, -15, -53, -58,  13,  34,  39, -57,  33,  14, -79, -57;
/I:         I=-42; MI=0; MD=-106; IM=0; DM=-106;
/M: SY='G';  M= -49, -77, -64, -76, -83, 103, -71, -91, -70, -86, -75, -50, -68, -67, -77, -49, -68, -84, -74, -78;
/M: SY='W';  M= -66, -81, -92, -78,  28, -77, -80, -46, -72, -48,  83, -83, -78, -70, -73, -75, -69,  37, 147, -36;
/M: SY='F';  M= -67, -71, -86, -80,  75, -86, -72,  41, -78,  55, -37, -79, -82, -78, -77, -74, -62,  18, -60, -40;
/M: SY='V';  M= -61, -69, -85, -79,  60, -85, -78,  37, -77,  22, -40, -79, -80, -78, -77, -71, -57,  72, -68, -46;
/M: SY='P';  M= -68, -86, -70, -59,  52, -71, -67, -68, -59, -71, -65, -72, 113, -66,  19, -65, -61, -73, -68, -60;
/M: SY='H';  M=   6, -70, -69, -67,  43, -68,  64, -51, -66,   6,  36, -61, -74, -61, -65,  40, -55,  10, -60,  61;
/M: SY='N';  M=  10, -70,  57, -51, -75,   8, -56, -62, -56, -70, -65,  73, -69,  22, -62, -48,  21,  21, -89, -69;
/M: SY='C';  M=  23,  82,  10, -66,  53,  22, -68,  -3, -68, -62, -63, -57, -74, -66, -72,  44, -54, -59, -71, -55;
/M: SY='M';  M= -59, -73,   7,  44, -69, -64, -54,  13, -54, -59,  76,  72,  18, -50, -61,  20, -52, -59, -83, -65;
/M: SY='P';  M= -62, -77, -69, -66, -51,   8, -61, -10, -67,  31, -51, -67,  75, -65, -71,   3,  18, -57, -62,  64;
/M: SY='V';  M= -30, -72, -64,  40,  46, -75, -69, -41, -64, -15, -53, -69,  43, -62, -69,  11, -54,  61, -73, -55;
/M: SY='Y';  M= -62, -71, -71, -66, -45, -78, -60,  29, -65,  41, -42, -66, -74,  37, -66, -58,  53,   3, -62,  63;
/M: SY='E';  M=  39, -71, -55,  52, -74,  42, -63, -64, -57, -66,  34, -57, -65,  11, -63,  19, -56,   7, -78, -69;
/M: SY='E';  M= -63, -80,  40,  63, -65,  -4,  48, -79,  35, -73, -66, -51, -65, -44,  26, -58, -62, -76, -69,  50;
/M: SY='F';  M= -67, -77,  11, -52,  64, -75,  27, -63,  43,  -1, -55, -57, -74,  54,  35, -62, -63, -65, -61,  21;
/M: SY='W';  M= -66, -78,  60,  -6,  29, -68, -62,   1, -10, -66, -65,  47, -70,  14, -62, -57,  25, -66, 106, -50;
/M: SY='F';  M= -65, -71,   8, -74,  65, -84, -73,  38, -76,  42, -40, -74, -80, -76, -76, -71, -60,  45, -65, -44;
/M: SY='Q';  M= -32, -71, -72, -60, -55, -78, -66,   9,  15,  50, -41, -67, -75,  60, -59, -62,  -5,  43, -76, -59;
/M: SY='F';  M= -69, -75, -79, -69,  74, -80, -67,   1, -71,  50, -43, -76,  59,  20, -72, -71, -63, -50, -60, -43;
/M: SY='W';  M=   6,  51, -73, -65, -65,  34, -69,  -1, -48, -70, -65, -63, -75, -57,  73, -60, -67, -68, 109, -56;
/M: SY='K';  M= -60, -76, -60, -49, -74, -71,  25, -68,  73, -70, -62, -52, -69, -44,  73,  14, -57,  11, -77, -62;
/I:         I=-19; MD=-47;
/M: SY='N';  M= -77, -85, -71, -78, -77, -82, -72,  12,   1,  -4,  51,  65, -87, -72, -74, -70,  18, -66, -97, -77; D=-19;
/I:         I=-19; MI=0; MD=-47; IM=0; DM=-47;
/M: SY='Y';  M= -88, -99, -88, -81, -67, -99,  14,   9,  39,  -4, -70, -83, -95, -75, -10, -86, -83, -75, -78,  55; D=-19;
/I:         I=-19; DM=-47;
/M: SY='G';  M= -60, -84, -65,  13, -88,  79, -71, -94,  19, -89, -79, -58, -73, -62,  20, -59, -72, -88, -81, -80; D=-19;
/I:         I=-19; DM=-47;
/M: SY='R';  M=  29,  25, -62,  15,   5, -70, -60,   2,  18,   4, -56,  -4, -72, -51,  69, -58, -60, -58, -74, -60;
/M: SY='G';  M= -48, -75, -63, -74, -82,  99, -70, -89, -68, -85, -75, -50, -68, -65, -75,  14, -64, -82, -74, -77;
/M: SY='G';  M=  27, -74,  21, -12, -82,  86, -67, -84, -65, -81, -73, -50, -67, -62, -72,  -4, -62, -76, -77, -75;
/I:         E1=0; IE=-380; DE=-380;
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2021_03 which contains 565'254 sequence entries.


Total number of hits 54 in 54 different sequences
Number of true positive hits 54 in 54 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Taxonomic range [info] Eukaryotic viruses
Maximum number of repetitions [info] 1
Feature key [info] DOMAIN
Feature description [info] CoV Nsp1 globular
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
54 sequences

R1AB_BC133  (P0C6W1    ), R1AB_BC279  (P0C6V9    ), R1AB_BC512  (P0C6W0    ), 
R1AB_BCHK3  (P0C6W2    ), R1AB_BCHK4  (P0C6W3    ), R1AB_BCHK5  (P0C6W4    ), 
R1AB_BCHK9  (P0C6W5    ), R1AB_BCRP3  (P0C6W6    ), R1AB_CVBEN  (P0C6W7    ), 
R1AB_CVBLU  (P0C6W8    ), R1AB_CVBM   (P0C6W9    ), R1AB_CVBQ   (P0C6X0    ), 
R1AB_CVH22  (P0C6X1    ), R1AB_CVHN1  (P0C6X2    ), R1AB_CVHN2  (P0C6X3    ), 
R1AB_CVHN5  (P0C6X4    ), R1AB_CVHNL  (P0C6X5    ), R1AB_CVHOC  (P0C6X6    ), 
R1AB_CVM2   (P0C6X8    ), R1AB_CVMA5  (P0C6X9    ), R1AB_CVMJD  (P26627    ), 
R1AB_CVMJH  (P0C6Y0    ), R1AB_CVPPU  (P0C6Y5    ), R1AB_FIPV   (Q98VG9    ), 
R1AB_MERS1  (K9N7C7    ), R1AB_PEDV7  (P0C6Y4    ), R1AB_SARS   (P0C6X7    ), 
R1AB_SARS2  (P0DTD1    ), R1A_BC133   (P0C6F7    ), R1A_BC279   (P0C6F5    ), 
R1A_BC512   (P0C6F6    ), R1A_BCHK3   (P0C6F8    ), R1A_BCHK4   (P0C6T4    ), 
R1A_BCHK5   (P0C6T5    ), R1A_BCHK9   (P0C6T6    ), R1A_BCRP3   (P0C6T7    ), 
R1A_CVBEN   (P0C6T8    ), R1A_CVBLU   (P0C6T9    ), R1A_CVBM    (P0C6U0    ), 
R1A_CVBQ    (P0C6U1    ), R1A_CVH22   (P0C6U2    ), R1A_CVHN1   (P0C6U3    ), 
R1A_CVHN2   (P0C6U4    ), R1A_CVHN5   (P0C6U5    ), R1A_CVHNL   (P0C6U6    ), 
R1A_CVHOC   (P0C6U7    ), R1A_CVM2    (P0C6U9    ), R1A_CVMA5   (P0C6V0    ), 
R1A_CVMJH   (P0C6V1    ), R1A_CVPPU   (P0C6V2    ), R1A_MERS1   (K9N638    ), 
R1A_PEDV7   (P0C6V6    ), R1A_SARS    (P0C6U8    ), R1A_SARS2   (P0DTC1    )
» more

PDB
[Detailed view]
20 PDB

2GDT; 2HSX; 3ZBD; 6IVC; 6IVD; 6LP9; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZN5; 6ZOJ; 6ZOK; 6ZON; 6ZP4; 7K3N; 7K5I; 7K7P
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission