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PROSITE entry PS51962


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General information about the entry

Entry name [info] COV_NSP1
Accession [info] PS51962
Entry type [info] MATRIX
Date [info] 02-JUN-2021 CREATED;
23-FEB-2022 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51962
Associated ProRule [info] PRU01307

Name and characterization of the entry

Description [info] Coronavirus (CoV) Nsp1 globular domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=123;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=118;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.4485769; R2=0.0089645; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=954; N_SCORE=11.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=452; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-38; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;
...
                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-380; BD=-380;
/M: SY='R';  M=  19, -72, -66, -61,   3, -68,  34, -60, -54,  18, -54, -60,  32, -57,  43,  15,  35, -59, -69,  34;
/M: SY='H';  M= -55,  23,  21,  20, -68, -64,  66, -31,   6, -68, -62, -49, -66,  21, -55,  59,   5,  -5, -80,  12;
/M: SY='N';  M= -60, -70,  59, -50, -75, -58, -52, -64,  17, -73, -67,  92, -71, -52, -56,   6, -49,  22, -92, -69;
/M: SY='H';  M= -65, -81, -55, -48, -72, -70, 127, -77, -50, -65,  37, -47, -69,  79,  -2, -56, -65, -78, -88, -44;
/M: SY='V';  M= -56, -67, -84, -78,  28, -85, -81,   7, -76,  18, -40, -79, -80, -77, -76, -69, -54,  89, -78, -54;
/M: SY='S';  M=  13, -67, -61, -56, -70, -61, -61, -60,  40, -63,  50, -52, -66, -51,  20,  60,  35,   0, -79, -64;
/M: SY='C';  M= -62,  61, -82, -77, -49, -84, -75,  42, -76,  59, -37, -76, -80, -73, -77, -68,  10,  38, -78, -59;
/I:         I=-24; MD=-60;
/M: SY='T';  M=  29, -82, -78, -73, -82, -78, -82, -73,  -5,  -3, -70, -73,  44, -75, -77, -61,  56, -69, -93, -82; D=-24;
/I:         I=-24; MD=-60;
/M: SY='V';  M= -12, -80, -96, -90,  24, -94, -94, -39, -88,  -7, -57, -91, -93, -90, -89, -79, -67,  74, -90, -67; D=-24;
/I:         I=-24; MI=0; MD=-60; IM=0; DM=-60;
/M: SY='A';  M=  40, -82, -81, -83,  12, -79, -84, -67, -81, -75, -74,  27, -88, -82, -86, -65,  25,  22, -94, -77; D=-24;
/I:         I=-24; DM=-60;
/M: SY='D';  M=  -4, -78,  69,  36, -84,  -8, -57, -84, -50, -82, -76,  41, -69, -51,  35,  14, -58, -78, -90, -73; D=-24;
/I:         I=-24; DM=-60;
/M: SY='C';  M= -68,  98,  97, -45, -84, -69, -61, -86, -62, -82, -81,  20, -76, -64, -71, -60, -60, -80,-105, -77; D=-24;
/I:         I=-24; DM=-60;
/M: SY='M';  M= -18, -76, -68,  -6, -60, -72, -61, -55, -55, -15,  54, -65,  18, -57,  47,  38, -57,  23, -73,  37; D=-24;
/I:         I=-24; DM=-60;
/M: SY='C';  M=  12,  50, -56,  42, -70, -70, -59, -62, -48,  12, -57,  17,  15,  36,  47, -57, -59,  -8, -79, -67;
/M: SY='I';  M= -59,  33, -82, -77, -49, -83, -78,  57, -76,  46, -38, -76, -79, -73, -77,  -6, -56,  56, -78, -59;
/M: SY='S';  M= -58,  38, -60, -57, -67, -66, -60, -63,  38,  23, -57,  29,  27, -53,  36,  39,  11, -63, -79, -65;
/M: SY='G';  M=  38, -71, -68, -68, -68,  66, -71,  -3,  16,   5, -57, -59, -70, -63, -66, -53, -60,  10, -75, -69;
/M: SY='W';  M= -61, -74, -67, -60,  61, -70, -63,  -7, -60,  -1, -55,   1,  30,  61, -63,  23,  26, -59,  66, -46;
/M: SY='G';  M= -55, -79,  15,  58, -83,  64, -63, -84, -57, -82, -74, -53,  53, -53, -66,  16, -59, -79, -79, -76;
/M: SY='W';  M= -68,  91,  36, -68,  42, -74, -73,   3, -70,   1, -60,  13, -80, -72, -74, -68, -66, -62, 120, -45;
/M: SY='C';  M= -14,  91, -70, -67,  48, -13,  46, -66, -68, -13, -60, -61,  52, -67, -71,  39, -56, -64, -74, -55;
/M: SY='V';  M= -55, -69, -70,  21,  -5, -80, -75,  41, -67, -43,  30, -69, -72, -66, -71,  -8,  18,  73, -80, -59;
/M: SY='Q';  M= -19, -81,  47,  59, -80, -70, -55, -15, -45, -70, -64, -52,   6,  77,  23, -55, -60, -14, -80, -67;
/M: SY='S';  M= -14, -72,  26,  56, -80,  31, -59, -80,   3, -79, -72, -48, -62, -47, -57,  67, -50, -73, -81, -70;
/I:         I=-16; MD=-41;
/M: SY='E';  M=   1, -87, -61,  55, -88, -80, -73, -79, -67, -18, -77,  23, -80,   5, -73,  15, -68, -17, -96, -84; D=-16;
/I:         I=-16; MD=-41;
/M: SY='T';  M= -85, -97, -99, -98, -83,-100, -97,   9, -97,  22, -72, -90,-100, -92,-100,  20,  23, -71,-107, -88; D=-16;
/I:         I=-16; MI=0; MD=-41; IM=0; DM=-41;
/M: SY='A';  M=  90, -62, -70, -63, -71, -54, -72, -52, -65, -60, -57, -65, -68, -62, -69, -45, -52,  36, -78, -69;
/M: SY='L';  M= -64, -71, -75,  11,  35, -83, -64, -36, -71,  63, -38, -77, -80, -67, -71, -71, -61,  36, -61,  47;
/M: SY='Q';  M= -26, -74, -51,  31, -78, -63, -54, -67,   3, -71, -62,  35, -66,  79,  22,  44, -52,   4, -79, -65;
/M: SY='Y';  M= -61, -75, -55,  52,  24, -73,  31, -59, -53,  -3, -55, -59, -69,  41,  -5,  16,  -2,  -4, -62,  59;
/M: SY='Y';  M=  35, -70, -71, -68, -52,   6, -63,  17, -61, -54, -52, -65, -73, -63,  22, -55,  17,  44, -64,  63;
/M: SY='S';  M= -52, -72, -53,  21, -77, -61, -57, -78,  63, -77, -68, -48, -64, -43,  38,  74, -47, -71, -78, -66;
/M: SY='E';  M=  43, -72,   3,  60, -68, -62, -56, -71, -51, -70, -64, -54, -63,  43, -57,  22,  18, -64, -71,  37;
/M: SY='H';  M=  45,  54, -69, -61, -65, -68,  65,  21, -63, -53,  33, -62, -72,  46, -64, -55, -57,  36, -82, -59;
/M: SY='L';  M=  30, -68, -79, -73, -43, -76, -65, -37, -73,  73, -36, -77, -80, -68, -72, -66, -60,  10, -66,  38;
/M: SY='K';  M=   6, -71, -65, -55, -67, -70, -64, -52,  65, -12, -56, -58, -70, -51,  44,  17, -54,  44, -77, -64;
/M: SY='N';  M= -56, -70,   3,  24, -77, -60, -54, -74,  46, -76, -67,  68, -64,  13, -48,  35,  43, -70, -84, -68;
/M: SY='G';  M= -55, -79, -63, -62, -82,  79, -68, -83,  38, -83, -72, -54,  64, -61, -61, -53, -12, -79, -75, -76;
/M: SY='F';  M= -57, -71, -60,  29,  69,  14, -65, -64, -61, -62, -62, -57,  32, -61, -67,  31,  54, -62, -66, -49;
/M: SY='C';  M=   3,  70,  20,   2, -72, -70, -62, -67,  54,   0,  17, -57,  44,  11,  -2, -59, -59, -66, -79, -68;
/I:         I=-45; MD=-115;
/M: SY='G';  M=   4, -88, -76, -71, -88,  57, -75,   7, -66, -81, -73, -66, -80,  55,  16, -63, -75, -75, -85, -80; D=-45;
/I:         I=-45; MI=-115; IM=-115; DM=-115;
/M: SY='C';  M= -65,  82, -82, -78, -44, -83, -66,  32, -75,  62,  52, -77, -82, -71, -75, -72, -62, -41, -68,  38;
/M: SY='V';  M= -56, -70, -73, -67, -56, -75, -68,  16, -57,  34, -45, -66, -76, -60,  46,  39, -53,  55, -79, -60;
/M: SY='F';  M= -69, -74, -70,  30,  95, -81, -63,   0,  11,   6, -50, -70, -77, -67, -64, -69, -64, -21, -50,  27;
/M: SY='V';  M= -53, -69, -69,  18, -58, -77, -72, -30, -64,   3, -46, -69, -74,  31, -67,  10, -52,  84, -83, -62;
/M: SY='P';  M=  40, -77, -58,  32, -81, -61, -65, -73, -58, -78, -68, -63,  97, -56, -67,  28, -53, -69, -79, -76;
/M: SY='W';  M= -65,  56, -69,  17,   5, -78, -63,   2,  29,  32,  55, -68, -74,  16, -58, -67, -63, -54,  75,  27;
/M: SY='H';  M= -12, -77,  20, -61, -52,  44,  80, -73, -59, -68, -60, -52, -71, -57,   6, -54,  18, -71, -61,  79;
/M: SY='M';  M= -59,  34, -75, -70, -52, -76, -67, -36,  -6,  52,  55,  -9, -77, -64, -12,  10, -55,  45, -78, -59;
/M: SY='Q';  M=  10, -74, -65, -52, -64, -70, -58, -57,   2,  44, -48, -60, -73,  74,  50,   5, -59, -58, -73, -60;
/I:         I=-36; MD=-90;
/M: SY='D';  M= -86,-104,  65, -67,-105,  15,  37,-110, -73,-104, -96, -65, -92, -76,  24, -79, -85,-105,-113, -88; D=-36;
/I:         I=-36; MD=-90;
/M: SY='C';  M=  37,  52, -94, -90,   4, -87,  32, -82, -90,  -4, -76, -86, -97, -88, -92, -76, -12, -77, -99, -79; D=-36;
/I:         I=-36; MI=0; MD=-90; IM=0; DM=-90;
/M: SY='M';  M= -83, -96,  21, -15, -88, -97, -88,  -6, -85, -74,  53, -81,  16, -84, -91, -80,  24,   6,-107, -87; D=-36;
/I:         I=-36; DM=-90;
/M: SY='G';  M= -56,  54, -65, -64, -81,  77, -67, -84,  21, -82, -71, -55,  45, -60,  30, -54, -64, -79, -77, -75;
/M: SY='H';  M= -62,  56,   4, -62,  32,   4,  60,  35, -64, -20, -51,  -4, -75,  49, -66, -61, -60,  24, -76, -53;
/M: SY='L';  M= -19, -70, -64,  -7,  23, -71, -60, -48, -59,  61, -44,  45, -12, -60,  21,   3, -58, -52, -72, -55;
/M: SY='P';  M= -64, -86,  39,  32, -85,  -2, -63, -78,  16, -83, -72, -59, 102, -56, -62, -60, -59, -79, -81, -78;
/M: SY='D';  M= -60, -79,  70,  -4, -84,  43, -56, -83,  46, -81, -72,  17, -66,  50, -49, -52, -60, -80, -82, -70;
/M: SY='P';  M= -61, -81,  38, -54, -80,  34,  50, -77, -57, -79, -69, -53,  86, -60,   9, -54,  32, -76, -84, -70;
/M: SY='Y';  M= -26, -81, -72, -67, -37, -76, -51, -56, -52, -59, -55, -70,   7, -57,  56, -65, -64,  17,  82, 101;
/M: SY='V';  M=   6, -65, -78, -73, -57, -78, -82, -24, -71, -43, -45, -72, -75, -74, -74, -59,  24,  94, -87, -63;
/M: SY='M';  M= -66, -74, -81, -77,  43, -80, -55,  47, -70, -35, 108, -73, -76, -65, -69, -71, -62, -41, -53,  74;
/M: SY='G';  M= -13, -72, -72, -75, -59,  66, -72,  29, -72,  40, -48, -62, -72, -69, -76, -57,   9, -12, -74, -65;
/M: SY='V';  M= -60, -70,  10, -65, -52, -81, -72,   2,  28,  51, -40, -70, -77, -66, -63, -68, -57,  63, -79, -59;
/I:         I=-23; MD=-58;
/M: SY='F';  M= -69, -78, -62,  51,  68, -82,  20, -13, -56,   1, -57, -66, -74, -58,  35, -65,  20, -61, -67, -47; D=-23;
/I:         I=-23; MD=-58;
/M: SY='R';  M= -78,-100, -84, -80,-101,  49, -82,-107,  12,-101, -90, -73, -91, -71,  56, -76, -87,-101, -95, -91; D=-23;
/I:         I=-23; MI=0; MD=-58; IM=0; DM=-58;
/M: SY='R';  M= -70, -83, -66, -64, -83, -77, -65, -80,   1, -82, -74,  43, -81, -56,  74,  10,  18, -17, -92, -75; D=-23;
/I:         I=-23; DM=-58;
/M: SY='Y';  M= -72, -83, -76, -74,   5,   7,  28, -65, -67,  21, -60,   3, -85,   4,  21, -68,  17, -25, -76,  33; D=-23;
/I:         I=-23; DM=-58;
/M: SY='C';  M= -67,  50, -75, -68,   4, -81, -76,  15,  25, -68, -66, -66, -79,  34, -65,  16,  39,  -7, -87, -70; D=-23;
/I:         I=-23; DM=-58;
/M: SY='S';  M=  -4, -67, -68, -67, -58,  16, -67, -48, -66,  46, -48, -59, -71, -61, -69,  59,  18,  13, -78, -62;
/M: SY='C';  M= -61, 102,  58, -57,  -4,  15, -67,   2,  11, -67, -66, -53, -75, -64,  -3, -12, -59,  -9, -85, -67;
/M: SY='N';  M=  46,  23, -57,   3, -66, -60, -59, -63, -54,   0,  27,  66, -71, -55,  17, -51,   4, -61,  66, -63;
/I:         I=-38; MI=0; MD=-97; IM=0; DM=-97;
/M: SY='Y';  M= -66, -80, -58,  15,  14, -74,  31, -67,  32, -30, -56,   1, -73,  42,  39, -60, -63, -68, -53,  85;
/M: SY='C';  M=  -3,  83, -75, -71,   7,  -9, -72,  15, -70,   5,  33, -66,  30, -69, -74,  13,  -3,  22, -78, -62;
/M: SY='V';  M=  27, -66,  24, -63, -62, -13, -70, -42, -65,   5,  19, -59, -70, -65, -70, -15,  49,  54, -83, -64;
/M: SY='N';  M= -62,  51, -13, -61, -62, -69,  46, -54, -11,   0, -56,  57,  49, -61, -64, -56,  20,  27, -81,  16;
/I:         I=-33; MD=-84;
/M: SY='H';  M= -75, -80,  20, -66,  73, -78,  85, -66,  -5,   0, -59,  30, -82, -67, -66, -68, -68, -70, -71, -42; D=-33;
/I:         I=-33; MD=-84;
/M: SY='G';  M=   4, -76,   3, -67, -76,  53, -70, -72,  16,  -6,  27, -58, -73, -64, -67,  14,  20, -69, -83, -73; D=-33;
/I:         I=-33; MD=-84;
/M: SY='H';  M= -67, -84,  39,  18, -71, -73, 105, -78, -63, -75, -68, -53, -74, -56, -64,  25, -64, -12,  65,  -5; D=-33;
/I:         I=-33; MD=-84;
/M: SY='R';  M= -65, -80, -72, -64, -72, -80, -67, -51,   2, -61,  44,   9,  30,  23,  53, -66, -62,  51, -86, -69; D=-33;
/I:         I=-33; MD=-84;
/M: SY='P';  M=  30, -86, -76, -69, -92, -11, -79, -83, -72, -88, -79, -71,  70,  13, -79,  14,  16, -78, -92, -86; D=-33;
/I:         I=-33; MI=-84; IM=-84; DM=-84;
/M: SY='Y';  M= -11, -70, -72, -68,  40, -75, -62,   9, -64,  20,  23,   8, -76,  18,  -8, -61,  17,  36, -64,  40;
/I:         I=-19; MD=-47;
/M: SY='Q';  M=  10, -87, -78, -66, -84, -80,  10, -70, -63, -17, -68, -71, -85,  65,  23,   9, -70,  12, -92, -75; D=-19;
/I:         I=-19; MD=-47;
/M: SY='E';  M= -11, -86, -71,  46, -67, -89, -73, -65, -73,  33,  26, -80, -82, -67, -78, -73,  14, -66, -84,  16; D=-19;
/I:         I=-19; MD=-47;
/M: SY='Y';  M= -16, -86, -87, -82,  24, -89, -70, -61, -80,  28,  27, -83, -90,  13, -80, -75,  14, -65, -68,  58; D=-19;
/I:         I=-19; MD=-47;
/M: SY='M';  M=  -6, -82, -74, -78, -73, -78, -71, -63, -70, -69,  49,  43, -85, -71,  -1,  -1,  16,  22, -90,  15; D=-19;
/I:         I=-19; MD=-47;
/M: SY='M';  M=  32, -81, -86, -80,  21, -80, -83,  15,  -7, -64,  35, -77, -84, -77, -78,  -1,  -1,   7, -86, -69; D=-19;
/I:         I=-19; MD=-47;
/M: SY='D';  M= -13, -90,  57,  31, -97,   4, -71, -93, -66, -91, -86, -60, -78,  31, -73,  -1,  -1, -87, -99, -84; D=-19;
/I:         I=-19; MD=-47;
/M: SY='P';  M= -11, -92, -76,  12, -82, -12, -78, -74,   2,  20, -17, -79,  57,  13, -74, -74, -74, -76, -89, -82; D=-19;
/I:         I=-19; MD=-47;
/M: SY='D';  M=   4, -98,  61,  19,-103, -86, -80, -92, -78, -97, -94,  12, -90, -75, -86, -76, -79, -15,-114, -94; D=-19;
/I:         I=-19; MD=-47;
/M: SY='G';  M= -73,-101, -88,-100,-107,  79, -95,-115, -94,-110, -99, -74, -92, -91,-101, -73, -92,-108, -98,-102; D=-19;
/I:         I=-19; MD=-47;
/M: SY='V';  M= -15, -91,-102, -97, -80, -99,-104,  20, -96, -67, -69, -95, -99, -95, -98,  -5, -74,  59,-107, -86; D=-19;
/I:         I=-19; MD=-47;
/M: SY='C';  M= -17,  82, -94, -83, -92, -97, -88,  -9, -79, -19, -78, -86,-101,  47,   7, -82, -85, -80,-104, -90; D=-19;
/I:         I=-19; MD=-47;
/M: SY='Y';  M= -89, -97,-101,-100,  19, -15, -79, -67, -95,   8,  26, -96,-104, -92, -93, -91, -87,  -7, -72,  65; D=-19;
/I:         I=-19; MD=-47;
/M: SY='G';  M= -74, -98, -89, -98,-101,  70, -92,-101, -92, -97,  24, -75, -91, -89, -98, -73,  -3, -97, -99, -97; D=-19;
/I:         I=-19; MD=-47;
/M: SY='R';  M=   4, -95, -81, -79, -98, -88, -80, -96, -62, -96, -87,  24, -93, -72,  60, -72,  27, -89,-105, -90; D=-19;
/I:         I=-19; MD=-47;
/M: SY='G';  M= -73, -93, -86, -91, -95,  46, -91, -93, -88, -24, -87, -74, -90, -85, -94,  27,  27, -89,-102, -93; D=-19;
/I:         I=-19; MI=0; MD=-47; IM=0; DM=-47;
/M: SY='N';  M= -58, -75,  21, -57, -76,  57, -54, -72, -53, -69,  63,  68, -70,  37,  18, -52, -59, -73, -81, -68;
/M: SY='F';  M= -12, -70, -72,  -9,  68, -78, -68,  21,  23,  35, -45, -68, -74, -66, -63, -63,  21,  -3, -63, -44;
/M: SY='H';  M= -62,  22, -65, -57, -12, -75,  57,  12,  22, -16, -54, -57,  15,  35,  40, -57,  34,  12, -79, -57;
/I:         I=-42; MI=0; MD=-106; IM=0; DM=-106;
/M: SY='G';  M= -49, -77, -64, -76, -83, 103, -71, -91, -70, -86, -75, -50, -68, -67, -77, -49, -68, -84, -74, -78;
/M: SY='W';  M= -66, -80, -92, -78,  29, -77, -80, -45, -72, -48,  84, -83, -78, -70, -73, -75, -69,  39, 145, -36;
/M: SY='F';  M= -67, -71, -86, -80,  75, -86, -72,  41, -78,  55, -37, -79, -82, -78, -77, -74, -62,  16, -60, -40;
/M: SY='V';  M= -61, -69, -85, -79,  62, -85, -78,  36, -77,  23, -40, -79, -81, -78, -77, -71, -57,  71, -68, -46;
/M: SY='P';  M= -68, -87, -70, -59,  51, -71, -67, -69, -59, -71, -65, -72, 113, -66,  20, -65, -61, -73, -69, -60;
/M: SY='H';  M=   7, -71, -69, -67,  43, -68,  66, -51, -66,   4,  37, -61, -74, -61, -65,  39, -55,   8, -60,  62;
/M: SY='N';  M=   9, -70,  59, -51, -75,   7, -56, -62, -56, -70, -65,  72, -69,  23, -62, -49,  19,  22, -89, -69;
/M: SY='C';  M=  22,  82,  11, -66,  52,  23, -68,  -1, -68, -62, -63, -57, -74, -66, -72,  43, -55, -59, -72, -56;
/M: SY='M';  M= -59, -73,   8,  46, -69, -63, -54,  11, -54, -60,  75,  72,  19, -50, -60,  21, -52, -60, -83, -66;
/M: SY='P';  M= -62, -76, -70, -66, -50,   8, -61,  -8, -67,  32, -51, -67,  73, -65, -71,   4,  19, -57, -62,  63;
/M: SY='V';  M= -31, -72, -64,  40,  47, -75, -70, -41, -64, -19, -53, -69,  45, -63, -69,  10, -55,  61, -72, -55;
/M: SY='Y';  M= -61, -71, -71, -66, -45, -78, -61,  29, -65,  41, -42, -65, -73,  36, -66, -58,  55,   6, -63,  61;
/M: SY='E';  M=  39, -71, -55,  51, -75,  43, -63, -64, -57, -66,  36, -57, -65,  11, -63,  18, -56,   6, -77, -69;
/M: SY='E';  M= -63, -80,  41,  63, -65,  -2,  47, -79,  34, -73, -66, -51, -65, -44,  25, -58, -62, -76, -69,  52;
/M: SY='F';  M= -67, -77,  12, -52,  63, -75,  30, -63,  41,   0, -55, -57, -74,  53,  37, -62, -63, -65, -61,  20;
/M: SY='W';  M= -65, -77,  59,  -7,  28, -67, -61,   2,  -8, -66, -65,  48, -70,  16, -61, -56,  26, -66, 104, -50;
/M: SY='F';  M= -65, -71,   9, -74,  66, -84, -73,  38, -76,  41, -40, -74, -80, -76, -76, -71, -60,  45, -65, -44;
/M: SY='Q';  M= -33, -71, -72, -61, -55, -78, -67,  10,  15,  52, -40, -68, -75,  58, -59, -63,  -6,  42, -76, -58;
/I:         I=-33; MI=0; MD=-84; IM=0; DM=-84;
/M: SY='F';  M= -69, -71, -86, -80,  74, -86, -70,  29, -78,  69, -35, -80, -83, -76, -76, -76, -64, -40, -59, -40;
/M: SY='R';  M=   6,  50, -65, -58, -77,  33, -59, -82, -35, -75, -66, -56, -74, -48,  97, -57, -64, -73, -77, -67;
/M: SY='K';  M= -64, -79, -57, -44, -77, -72,  25, -80,  94, -77, -65, -50, -66, -40,  65, -58, -60, -76, -74, -63;
/M: SY='N';  M= -61,  61, -57, -63, -59,  22, -54, -68,   0,  -5, -60,  67, -74, -57,  31, -53,  21, -67, -70,  50;
/M: SY='G';  M= -11, -76, -65, -75, -71,  97, -67, -85, -69, -81, -72, -52, -69, -66, -75, -50, -67, -79, -67,  32;
/I:         E1=0; IE=-380; DE=-380;
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 54 in 54 different sequences
Number of true positive hits 54 in 54 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotic viruses
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] CoV Nsp1 globular
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
54 sequences

R1AB_BC133  (P0C6W1), R1AB_BC279  (P0C6V9), R1AB_BC512  (P0C6W0), 
R1AB_BCHK3  (P0C6W2), R1AB_BCHK4  (P0C6W3), R1AB_BCHK5  (P0C6W4), 
R1AB_BCHK9  (P0C6W5), R1AB_BCRP3  (P0C6W6), R1AB_CVBEN  (P0C6W7), 
R1AB_CVBLU  (P0C6W8), R1AB_CVBM   (P0C6W9), R1AB_CVBQ   (P0C6X0), 
R1AB_CVH22  (P0C6X1), R1AB_CVHN1  (P0C6X2), R1AB_CVHN2  (P0C6X3), 
R1AB_CVHN5  (P0C6X4), R1AB_CVHNL  (P0C6X5), R1AB_CVHOC  (P0C6X6), 
R1AB_CVM2   (P0C6X8), R1AB_CVMA5  (P0C6X9), R1AB_CVMJD  (P26627), 
R1AB_CVMJH  (P0C6Y0), R1AB_CVPPU  (P0C6Y5), R1AB_FIPV   (Q98VG9), 
R1AB_MERS1  (K9N7C7), R1AB_PEDV7  (P0C6Y4), R1AB_SARS   (P0C6X7), 
R1AB_SARS2  (P0DTD1), R1A_BC133   (P0C6F7), R1A_BC279   (P0C6F5), 
R1A_BC512   (P0C6F6), R1A_BCHK3   (P0C6F8), R1A_BCHK4   (P0C6T4), 
R1A_BCHK5   (P0C6T5), R1A_BCHK9   (P0C6T6), R1A_BCRP3   (P0C6T7), 
R1A_CVBEN   (P0C6T8), R1A_CVBLU   (P0C6T9), R1A_CVBM(P0C6U0), 
R1A_CVBQ(P0C6U1), R1A_CVH22   (P0C6U2), R1A_CVHN1   (P0C6U3), 
R1A_CVHN2   (P0C6U4), R1A_CVHN5   (P0C6U5), R1A_CVHNL   (P0C6U6), 
R1A_CVHOC   (P0C6U7), R1A_CVM2(P0C6U9), R1A_CVMA5   (P0C6V0), 
R1A_CVMJH   (P0C6V1), R1A_CVPPU   (P0C6V2), R1A_MERS1   (K9N638), 
R1A_PEDV7   (P0C6V6), R1A_SARS(P0C6U8), R1A_SARS2   (P0DTC1)
» more

PDB
[Detailed view]
31 PDB

2GDT; 2HSX; 3ZBD; 6IVC; 6IVD; 6LP9; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZN5; 6ZOJ; 6ZOK; 6ZON; 6ZP4; 7EQ4; 7K3N; 7K5I; 7K7P; 7OPL; 8A4Y; 8A55; 8AOU; 8AYS; 8AZ8; 8CRF; 8CRK; 8CRM; 8PPL
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