PROSITE entry PS51991
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General information about the entry
| Entry name [info] | COV_NSP2_C |
| Accession [info] | PS51991 |
| Entry type [info] | MATRIX |
| Date [info] |
25-MAY-2022 CREATED;
25-MAY-2022 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51989 |
| Associated ProRule [info] | PRU01335 |
Name and characterization of the entry
| Description [info] | Coronavirus (CoV) Nsp2 C-terminal domain profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=127; /DISJOINT: DEFINITION=PROTECT; N1=6; N2=122; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.6047168; R2=0.0077376; TEXT='-LogE'; /CUT_OFF: LEVEL=0; SCORE=956; N_SCORE=10.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=504; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-40; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-380; BD=-380; /M: SY='H'; M= -13, -73, -70, -64, -55, -75, 71, 11, -56, 51, -43, -63, -76, -57, 48, 8, -59, -4, -78, -54; /M: SY='D'; M= -61, -73, 68, 28, -78, -66, -55, -76, 28, -76, -70, 45, -64, -48, 20, -49, 53, -71, -88, -68; /M: SY='T'; M= -57, -70, 28, -49, -75, -64, -56, -71, -4, -73, -65, 42, -66, 42, 44, 24, 67, -66, -84, -66; /M: SY='V'; M= -57, -70, -84, -79, -51, -86, -85, 65, -76, -5, -39, -78, -77, -76, -78, -69, -54, 84, -82, -59; /M: SY='C'; M= -55, 92, -59, 19, -68, -68, -67, 12, 2, -62, -60, 24, -71, -59, -64, 34, 35, 20, -87, -69; /I: I=-36; MI=0; MD=-90; IM=0; DM=-90; /M: SY='W'; M= -66, -78, -86, -79, -46, -83, -83, 73, -75, 34, -41, -79, -76, -73, -78, -72, 5, 2, 115, -48; /M: SY='A'; M= 78, -65, -67, -64, -75, 43, -70, -63, -64, -68, -63, -58, -67, -61, -69, 15, -53, 6, -77, -71; /M: SY='G'; M= -49, -77, -64, -76, -83, 103, -71, -91, -70, -86, -75, -50, -68, -67, -77, -49, -68, -84, -74, -78; /M: SY='C'; M= 20, 54, -65, -66, -63, -65, -68, 19, -63, -9, -54, 24, -71, -62, -22, 43, 25, 35, -83, -65; /M: SY='K'; M= -9, 38, -57, -48, -78, -66, -61, -75, 88, -76, -66, 5, 34, -47, -36, -1, 9, -70, -77, -69; /M: SY='F'; M= -67, -71, -86, -81, 81, -85, -73, 45, -78, 42, -39, -79, -82, -79, -77, -74, -62, 29, -59, -38; /M: SY='Y'; M= -59, -76, 9, -52, -54, -66, -51, -72, 60, -70, -63, -53, 0, -48, 30, 46, -54, -70, -58, 77; /M: SY='Y'; M= 45, -68, -53, 39, -58, -61, -55, -66, -56, -67, -62, 24, -65, -53, -61, 14, 50, -60, -65, 62; /M: SY='Y'; M= -62, 35, -81, -77, 32, -83, -66, 11, -74, 34, -41, -77, -82, -73, -74, -70, -59, 60, -60, 65; /I: I=-8; MI=0; MD=-20; IM=0; DM=-20; /M: SY='N'; M= 41, -74, -59, 5, -84, 5, -67, -78, -64, -81, -74, 59, -73, -63, -71, -6, 42, -71, -91, -79; D=-8; /I: I=-8; DM=-20; /M: SY='G'; M= -67, -80, -80, -79, 12, 40, -78, -58, -78, 35, -57, -72, 32, -78, -82, -66, 26, -4, -80, -67; D=-8; /I: I=-8; DM=-20; /M: SY='R'; M= -64, 34, 9, -68, -81, 29, -70, 6, -60, -77, -72, 14, -78, -65, 40, 18, 29, -70, -90, -76; D=-8; /I: I=-8; DM=-20; /M: SY='E'; M= -67, -84, -4, 59, -74, -80, -66, -64, 3, -73, -70, 9, 24, -57, -65, -11, -63, 32, -83, 20; D=-8; /I: I=-8; DM=-20; /M: SY='P'; M= -4, -81, -73, -70, -74, 3, -74, -66, -71, -75, -70, -68, 68, -71, -78, 27, 25, 14, -82, 20; D=-8; /I: I=-8; DM=-20; /M: SY='F'; M= -79, -82, -85, -79, 79, -88, -65, -58, 20, 19, -55, -80, -89, -76, -69, -78, -73, -63, -52, 67; D=-8; /I: I=-8; DM=-20; /M: SY='I'; M= -70, -81, -93, -90, 12, -96, -91, 75, -86, -3, -46, -86, -85, -85, -88, -80, -65, 47, -81, -61; D=-8; /I: I=-8; DM=-20; /M: SY='V'; M= 12, -76, -5, -4, 45, -79, -78, -50, -75, -3, -59, -73, -81, -74, -78, -1, -1, 46, -79, -59; D=-8; /I: I=-8; DM=-20; /M: SY='P'; M= -72, -87, -74, -67, -72, -81, 26, 39, -65, -15, 51, 16, 53, 41, 5, -70, -68, -58, -86, -68; D=-8; /I: I=-8; DM=-20; /M: SY='S'; M= -54, 48, -57, 15, -79, -7, -63, -80, 21, -80, -73, 13, -70, -52, 9, 69, 5, -73, -86, -72; D=-8; /I: I=-8; DM=-20; /M: SY='G'; M= -61, -81, 46, -57, -85, 65, -63, -89, 28, -86, -77, 25, -72, -58, 31, -56, -65, -84, -83, -75; D=-8; /I: I=-8; DM=-20; /M: SY='C'; M= 31, 62, -73, -75, 10, 47, -77, 1, -72, -66, -64, -62, -74, -72, -77, -54, 39, -3, -80, -68; D=-8; /I: I=-8; DM=-20; /M: SY='Y'; M= -73, -81, -88, -85, 12, -92, -69, 20, -82, 46, -45, -86, -90, -78, -80, -80, -69, 23, -62, 71; D=-8; /I: I=-8; DM=-20; /M: SY='Y'; M= -73, 39, -76, -77, 19, -82, 59, -66, -74, -2, -58, -70, -86, -70, -72, -1, 4, -68, -56, 91; D=-8; /I: I=-8; DM=-20; /M: SY='C'; M= -66, 75, -66, 2, -82, -76, 47, -86, 5, -81, -73, -60, -78, -57, 55, 33, 3, -78, -92, -71; D=-8; /I: I=-8; DM=-20; /M: SY='V'; M= -61, -77, -80, -71, -67, -83, -79, -39, -7, -7, -54, -74, -82, 40, -70, 11, -59, 74, -90, -69; D=-8; /I: I=-8; DM=-20; /M: SY='C'; M= -62, 77, -69, 3, -76, -76, -74, 21, -4, -69, -67, -63, -77, 19, -69, 42, 24, -14, -91, -75; D=-8; /I: I=-8; DM=-20; /M: SY='T'; M= -66, -80, -64, 19, -74, -79, -68, 20, -57, -14, -62, 15, -75, 32, 30, -3, 39, -9, -88, -71; D=-8; /I: I=-8; DM=-20; /M: SY='K'; M= -66, 38, -70, -58, -65, -80, -64, -57, 51, 15, -55, -64, -78, 36, 46, -65, -63, 23, -76, 10; D=-8; /I: I=-8; DM=-20; /M: SY='G'; M= 30, -76, -66, 2, 32, 47, -69, -75, -65, -73, -68, -61, 28, 28, -70, -3, 7, -70, -74, -64; D=-8; /I: I=-8; DM=-20; /M: SY='K'; M= 13, -79, -60, 25, -77, -73, -62, -74, 75, -5, -64, -58, -70, -47, 43, -60, -63, -71, -78, -69; D=-8; /I: I=-8; MI=0; MD=-20; IM=0; DM=-20; /M: SY='D'; M= -67, 37, 45, 38, -85, -26, -68, -3, -1, -81, -77, -59, -75, -57, 20, 32, -63, -75, -93, -77; D=-8; /I: I=-8; DM=-20; /M: SY='Q'; M= -68, -83, 5, 25, -73, -85, -71, -52, -65, 15, -57, -71, -80, 69, -67, -69, -67, 47, -88, -71; D=-8; /I: I=-8; DM=-20; /M: SY='M'; M= -70, -80, -81, -77, 28, -8, -69, -57, -75, 34, 37, -74, -16, 5, -76, -7, 27, -61, -71, 35; D=-8; /I: I=-8; DM=-20; /M: SY='Q'; M= -1, -84, 35, -56, 37, -13, -64, -75, -63, -16, -67, 17, -80, 77, -65, -62, -69, -76, -79, -62; D=-8; /I: I=-8; MI=0; MD=-20; IM=0; DM=-20; /M: SY='L'; M= -83, -88, -99, -94, -56,-102, -83, 23, -93, 57, -49, -97, -98, -87, -91, -91, -78, -11, -80, 30; D=-8; /I: I=-8; DM=-20; /M: SY='P'; M= -77, -88, -93, -87, -70, -96, -91, 7, -88, 32, -58, -90, 37, -87, -91, -81, 16, 30, -95, -78; D=-8; /I: I=-8; DM=-20; /M: SY='M'; M= -76, -84, -94, -88, -68, -94, -79, -10, -84, 9, 100, -84, -88, -79, -85, -79, 28, -6, -93, -71; D=-8; /I: I=-8; DM=-20; /M: SY='P'; M= -78,-103, -74, -1, -99, -81, -79, -87, -71, -95, -82, -82, 108, 13, -82, -74, -72, -91, -91, -93; D=-8; /I: I=-8; DM=-20; /M: SY='H'; M= -12, -84, 3, -74, -76, 27, 35, -67, -2, 18, -65, -68, -84, -72, -75, 11, -69, 2, -92, -74; D=-8; /I: I=-8; MI=0; MD=-20; IM=0; DM=-20; /M: SY='D'; M= -73, -93, 59, -5, -97, 22, -68, -96, 27, -92, -83, -57, -78, 53, -11, -66, -73, -92, -94, -81; D=-8; /I: I=-8; MI=0; MD=-20; IM=0; DM=-20; /M: SY='Q'; M= 36, -85, -76, -71, -87, -75, -77, 21, -72, -77, -72, 16, -84, 50, -76, 11, -14, -67, -94, -81; D=-8; /I: I=-8; DM=-20; /M: SY='K'; M= -74, 47, -65, 32, -91, -82, -73, -90, 69, -89, -80, -67, 52, -57, -51, -70, -70, -86, -89, -83; D=-8; /I: I=-8; DM=-20; /M: SY='K'; M= -69, -86, -67, -55, -88, -76, -66, -83, 70, -81, 31, -10, -76, 58, -46, 21, -65, -81, -86, -74; D=-8; /I: I=-8; DM=-20; /M: SY='E'; M= 9, -75, -52, 64, 63, -71, -58, -67, 15, -62, -61, -58, -65, 58, -52, -55, 10, -65, -65, -50; /M: SY='I'; M= 2, -71, -71, -69, -53, -38, -67, 40, -4, 32, -45, 10, 17, -65, -67, 2, -55, 35, -72, 22; /M: SY='T'; M= -54, -70, -59, 27, -61, 28, -64, 29, -60, -60, -57, -55, -65, -58, -67, 19, 68, -4, -73, 31; /M: SY='F'; M= -70, 48, -85, -82, 101, -83, -67, 23, -77, -12, -48, -76, -84, -82, -76, -72, -64, 0, -48, 39; /M: SY='L'; M= -67, -71, -71, 3, 36, -81, -64, -41, -10, 74, -37, 9, -79, -63, 2, -70, -62, -47, -68, -50; /M: SY='D'; M= -60, -76, 63, 61, -78, -68, 32, -71, 15, -73, -68, 13, -63, 11, -53, 4, -3, 2, -87, -66; /I: I=-36; MD=-90; /M: SY='C'; M= 25, 62, -98, -91,-105, -91,-101, -98, -94,-101, -94, -93, 49, -95,-102, -80, 2, -91,-112,-105; D=-36; /I: I=-36; MI=0; MD=-90; IM=0; DM=-90; /M: SY='V'; M= -86, -96, -99,-102, 8,-104, -97, -59, -97, -72, 32, 22,-106, -98, -99, -92, -82, 51,-107, -82; D=-36; /I: I=-36; DM=-90; /M: SY='G'; M= -54, -78, -64, -67, 6, 78, 30, -81, -66, -79, -70, -55, 68, -65, -73, 13, -62, -79, -74, -68; /M: SY='D'; M= -57, -73, 48, 31, -70, -69, -64, 4, -59, -61, -60, 19, 38, -57, -66, 13, 19, 46, -87, -68; /M: SY='T'; M= 44, -65, -68, -66, 11, 8, -71, 11, -65, -57, -56, -58, -68, -64, -70, 31, 47, 33, -77, -61; /M: SY='D'; M= -60, -74, 63, 39, -72, -67, 58, -62, 3, -20, -62, 34, -67, -50, -57, 13, -54, 24, -89, -63; /M: SY='P'; M= -6, -77, 61, -49, -81, -61, -61, -75, -58, -80, -72, 12, 87, -58, -67, 38, 11, -72, -86, -74; /M: SY='T'; M= 2, -69, -64, -64, 23, 12, -68, 5, -11, -59, -57, 15, 15, -63, 2, -50, 64, 22, -76, -60; /M: SY='V'; M= -5, -70, 12, -3, -63, -72, 36, 28, -11, -53, -52, -58, -70, -59, 4, 13, 24, 56, -84, -61; /M: SY='I'; M= -62, -71, -83, -79, 46, -85, -78, 64, -76, 24, -39, -75, -77, -76, -77, -68, 7, 54, -70, -49; /M: SY='E'; M= 5, -70, 37, 59, -71, -65, -58, -66, -53, 6, -62, 22, -63, -49, -61, 19, 48, -62, -84, -68; /M: SY='T'; M= -2, -67, 62, -52, -71, -64, -64, 2, -59, -65, -63, -47, -64, -59, -66, 35, 75, -2, -88, -66; /M: SY='D'; M= -10, -74, 74, 62, -82, -61, -53, -81, -50, -80, -75, 50, -63, -46, -58, 31, -52, -75, -89, -71; /M: SY='V'; M= -57, -72, 27, 51, 7, -73, 34, -46, -59, -10, 21, -59, -69, -55, -64, 26, -54, 53, -81, -58; /I: I=-36; MI=0; MD=-90; IM=0; DM=-90; /M: SY='V'; M= -57, -69, -84, -78, -50, -86, -82, 44, -76, 28, -38, -79, -79, -76, -77, -69, -54, 84, -82, -59; /M: SY='E'; M= -60, -77, 44, 88, -71, -76, -59, -58, -50, 2, -61, -57, -63, -45, -59, -60, -58, 30, -83, -68; /M: SY='L'; M= -61, -68, -70, 1, -49, -80, -68, -33, -69, 65, -38, 22, -78, -66, -71, -66, -4, 52, -78, -59; /M: SY='V'; M= -57, 38, -59, 49, -64, -78, -68, -42, 49, -9, -53, -64, -70, -54, -53, -62, -55, 66, -82, -65; /M: SY='T'; M= -59, -73, 13, 42, -74, -68, 39, -65, 37, -70, -64, 24, 34, -50, -52, -15, 50, 6, -85, -66; /M: SY='G'; M= 43, -67, -64, -66, -75, 64, -69, -67, -64, -71, -65, -53, -66, -63, -70, 13, 51, -7, -78, -71; /M: SY='Q'; M= -56, -75, 44, 53, -77, -67, -58, -64, -51, -70, -65, -51, 25, 55, -58, 37, 4, 19, -83, -68; /M: SY='L'; M= -69, -71, -84, -78, 65, -84, -64, -38, -77, 74, -35, -81, -85, -73, -74, -75, -64, -45, -55, 43; /M: SY='E'; M= -54, -71, -51, 66, -69, -73, -64, -50, 0, -60, -58, -58, -64, 15, -57, 11, 43, 52, -83, -67; /I: I=-24; MD=-60; /M: SY='E'; M= 9,-103, -73, 51, -90, -94, -81,-100, -6, -97, -91, -86, 5, -71, -80, -81, -85, -94, -91, 29; D=-24; /I: I=-24; MI=0; MD=-60; IM=0; DM=-60; /M: SY='P'; M= -84,-107, -90, -80,-104, -91, -92, -87, -85, -99, -90, -90, 85, 4, -94, 6, -79, -10,-105,-100; D=-24; /I: I=-24; DM=-60; /M: SY='C'; M= -78, 51, -87, -83, 10, -93, -82, -23, -81, -74, -73, -78, -91, 26, -84, -71, 50, 2, -85, 30; D=-24; /I: I=-24; DM=-60; /M: SY='G'; M= -74, -94, 29, 10,-100, 43, -76,-103, -16,-102, -93, 36, -85, -71, -79, -8, -75, -98,-102, -92; D=-24; /I: I=-24; DM=-60; /M: SY='Y'; M= -11, 47, -74, 36, -70, -86, -72, -85, -76, -81, 17, -79, -88, -70, -80, 19, -74, -82, -78, 60; D=-24; /I: I=-24; DM=-60; /M: SY='C'; M= -17, 77, -85, -84, 31, -84, 70, -90, -84, -82, -80, -74, -94, -80, -85, 30, -74, -85, -96, -67; D=-24; /I: I=-24; DM=-60; /M: SY='Q'; M= -73, -91, 7, 13, -95, -5, -79, -86, 8, -89, -84, -68, -82, 28, -72, 10, 25, -16,-100, -86; D=-24; /I: I=-24; DM=-60; /M: SY='P'; M= -77, -98, -74, -6, -95, -81, -80, -81, -74, -92, -82, 20, 96, -76, -85, -24, -70, -9, -97, -93; D=-24; /I: I=-24; DM=-60; /M: SY='P'; M= -12, -83, -1, 22, -83, 16, -65, -77, 2, -82, -71, -61, 102, -57, -65, 5, -57, -76, -79, -78; /M: SY='K'; M= 28, -72, -65, -57, -69, 19, -65, -60, 56, 3, 36, -58, 38, -56, -52, -20, 1, -13, -75, -66; /M: SY='V'; M= -55, 40, -4, -66, -59, -72, -71, 31, 0, 8, -48, 9, -74, -65, -67, 35, -51, 60, -83, -63; /M: SY='V'; M= 5, -69, 33, -61, 20, -4, -66, -10, 1, -55, -55, 49, -74, -64, -65, -57, -54, 62, -80, -60; /M: SY='G'; M= -52, -78, 22, 37, -83, 91, -66, -89, -62, -84, -76, -49, -66, -58, -70, -51, -66, -83, -77, -76; /M: SY='K'; M= -59, -72, 37, -51, -74, 18, -60, -1, 62, -71, -65, 41, -65, -52, -48, -49, 55, -64, -82, -68; /M: SY='I'; M= -65, -78, -77, -70, -46, -81, -66, 61, -69, 27, -42, -74, 52, 18, -72, -68, -60, 17, -63, 58; /M: SY='C'; M= 16, 95, -81, -76, 12, -77, -81, 22, -74, -47, -50, -73, -80, -77, -77, -63, -55, 70, -82, -62; /M: SY='C'; M= -60, 77, -82, -79, 13, -82, -80, 74, -76, -2, -43, -73, -78, -75, -79, -1, -56, 41, -77, -57; /M: SY='I'; M= -59, -71, -85, -80, -50, -87, -83, 77, -77, 15, -37, -78, -77, -76, -79, -71, -55, 69, -79, -58; /M: SY='D'; M= 27, -71, 85, -44, -81, -55, -55, -77, -55, -79, -74, 52, -67, -53, -62, 48, -49, -72, -91, -70; /M: SY='G'; M= -55, -75, 37, 24, -81, 64, -57, -84, 11, -83, -74, 61, -67, -53, -59, 3, -57, -80, -82, -73; /M: SY='Y'; M= -65, -74, 8, -60, 11, -77, 37, -48, 47, 36, 44, -62, -75, -58, -53, -66, -61, 9, -62, 59; /M: SY='Y'; M= -10, -71, -73, -71, -39, -74, -54, -7, -67, 25, 71, -68, -75, -62, -67, -2, 23, 1, -54, 86; /M: SY='F'; M= -69, -70, -86, -79, 94, -82, -64, -41, -75, 36, 89, -76, -81, -75, -72, -74, -64, -47, -53, -32; /M: SY='Y'; M= 28, -72, -76, -73, -41, 3, -61, -44, -70, 21, -48, -72, -78, -67, -70, -61, -60, 42, 63, 82; /M: SY='K'; M= -62, -79, -53, 39, -65, -72, -53, -77, 75, -73, -64, -53, -66, -41, 56, -1, -59, -73, -65, 46; /M: SY='C'; M= 5, 77, 56, -56, -68, -68, -67, 15, 2, -10, -59, -53, -71, -62, -65, 13, 34, -2, -87, -67; /M: SY='G'; M= -56, -77, 28, 52, -79, 62, -63, -72, 40, -75, -69, -51, -65, -51, -55, -54, -61, 11, -79, -72; /I: I=-42; MI=0; MD=-106; IM=0; DM=-106; /M: SY='D'; M= -33, -77, 108, -37, -84, -2, -56, -81, -56, -81, -78, 0, -66, -56, -64, -51, 28, -77, -98, -70; /M: SY='K'; M= -58, -75, 30, 30, -75, 14, -58, -67, 55, -18, -63, 25, -66, 30, -47, -10, 1, -4, -80, -67; /I: I=-38; MD=-97; /M: SY='E'; M= -90,-104, -72, 57, 29,-103, 52, -6, -78, -84, -84, -84, -90, -72, -83, -87, -88, -86, -96, -73; D=-38; /I: I=-38; MI=0; MD=-97; IM=0; DM=-97; /M: SY='Y'; M= -73, -77, -77, -78, 88, -80, -47, -53, -71, -47, -50, -74, -85, -71, -68, -69, -66, -58, -32, 111; /M: SY='Y'; M= -69, 77, -73, -74, 28, -78, -45, -60, -64, -55, -53, -70, -84, -64, 6, -66, -65, -62, -37, 118; /M: SY='P'; M= 26, -84, -67, -57, -75, -65, -67, -71, -63, -78, -67, -71, 116, -65, -73, -59, -58, -72, -73, 20; /M: SY='V'; M= 12, -68, -74, -71, -48, -72, -67, 15, -70, 41, -43, -69, -75, -66, -71, 24, 4, 45, -69, 40; /M: SY='C'; M= -10, 76, 31, -60, -70, 12, -67, -54, 1, -64, -62, 17, -73, -62, -65, 38, -51, 46, -87, -69; /M: SY='P'; M= -55, 38, -69, -68, 6, 33, -70, -14, -67, -58, 42, -61, 52, -67, -72, 20, 30, 32, -78, -63; /M: SY='N'; M= -58, -73, 56, -53, -80, 51, -54, -80, 0, -82, -73, 84, -69, -55, -60, -48, 9, -78, -88, -72; /M: SY='G'; M= -56, -73, 29, -62, -71, 66, -60, -68, -3, 5, 49, 47, -70, -59, -64, -1, -59, -68, -79, -68; /I: I=-36; MI=0; MD=-90; IM=0; DM=-90; /M: SY='C'; M= -82, 47, -91, -89, -88, 29, 19, -86, 18, 2, 23, -81, -96, -83, -81, -83, -86, -86,-101, -86; D=-36; /I: I=-36; DM=-90; /M: SY='V'; M= 26, -67, -81, -75, -53, -77, -79, 39, -74, 25, -41, -76, -77, -72, -75, -64, -54, 75, -80, -61; /M: SY='V'; M= -58, -66, -78, -73, -49, -82, -74, -29, -73, 60, -37, -73, -77, -71, -74, -63, 42, 64, -80, -58; /M: SY='P'; M= -9, -78, 62, -47, -83, -3, -57, -78, -55, -81, -71, 51, 73, 38, -63, 6, -54, -77, -86, -73; /M: SY='Q'; M= -57, -72, -55, -52, -71, -66, 11, -2, 22, -63, -57, 51, -68, 68, 5, 1, 40, 21, -82, -63; /M: SY='C'; M= 58, 85, -75, -69, -61, -65, -71, -49, -69, 19, 52, -67, -74, -67, -72, -54, 1, 18, -81, -66; /M: SY='W'; M= -75, -78, -89, -82, 104, -80, -69, -55, -75, -48, -55, -80, -84, -81, -74, -75, -72, -61, 121, 46; /M: SY='R'; M= -62, -75, -57, -52, -75, -70, -54, -76, 28, -74, -64, 33, -70, -44, 92, -14, 45, -70, -79, -64; /M: SY='K'; M= -65, -72, -72, -61, 48, -79, -65, -45, 66, 53, -43, -66, -75, -59, -50, -68, -60, 9, -66, -49; /M: SY='K'; M= -6, -78, -63, -51, -73, -69, -61, -66, 76, -14, 51, -59, 70, -50, 11, -60, -58, -66, -74, -66; /M: SY='C'; M= 19, 95, -68, -75, -79, 83, -73, -83, -70, -78, -71, -55, -73, -70, -77, -51, -64, -73, -80, -78; /M: SY='G'; M= 44, -72, -65, -71, -81, 91, -71, -83, -68, -80, -71, -53, -68, -65, -74, -47, -63, -73, -74, -76; /I: E1=0; IE=-380; DE=-380;» more |
Numerical results [info]
| Total number of hits | 53 in 53 different sequences |
| Number of true positive hits | 53 in 53 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Taxonomic range [info] | Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Feature key [info] | DOMAIN |
| Feature description [info] | CoV Nsp2 C-terminal |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
53 sequences
R1AB_BC133 (P0C6W1), R1AB_BC279 (P0C6V9), R1AB_BC512 (P0C6W0), R1AB_BCHK3 (P0C6W2), R1AB_BCHK4 (P0C6W3), R1AB_BCHK5 (P0C6W4), R1AB_BCHK9 (P0C6W5), R1AB_BCRP3 (P0C6W6), R1AB_CVBEN (P0C6W7), R1AB_CVBLU (P0C6W8), R1AB_CVBM (P0C6W9), R1AB_CVBQ (P0C6X0), R1AB_CVH22 (P0C6X1), R1AB_CVHN1 (P0C6X2), R1AB_CVHN2 (P0C6X3), R1AB_CVHN5 (P0C6X4), R1AB_CVHNL (P0C6X5), R1AB_CVHOC (P0C6X6), R1AB_CVM2 (P0C6X8), R1AB_CVMA5 (P0C6X9), R1AB_CVMJH (P0C6Y0), R1AB_CVPPU (P0C6Y5), R1AB_FIPV (Q98VG9), R1AB_MERS1 (K9N7C7), R1AB_PEDV7 (P0C6Y4), R1AB_SARS (P0C6X7), R1AB_SARS2 (P0DTD1), R1A_BC133 (P0C6F7), R1A_BC279 (P0C6F5), R1A_BC512 (P0C6F6), R1A_BCHK3 (P0C6F8), R1A_BCHK4 (P0C6T4), R1A_BCHK5 (P0C6T5), R1A_BCHK9 (P0C6T6), R1A_BCRP3 (P0C6T7), R1A_CVBEN (P0C6T8), R1A_CVBLU (P0C6T9), R1A_CVBM(P0C6U0), R1A_CVBQ(P0C6U1), R1A_CVH22 (P0C6U2), R1A_CVHN1 (P0C6U3), R1A_CVHN2 (P0C6U4), R1A_CVHN5 (P0C6U5), R1A_CVHNL (P0C6U6), R1A_CVHOC (P0C6U7), R1A_CVM2(P0C6U9), R1A_CVMA5 (P0C6V0), R1A_CVMJH (P0C6V1), R1A_CVPPU (P0C6V2), R1A_MERS1 (K9N638), R1A_PEDV7 (P0C6V6), R1A_SARS(P0C6U8), R1A_SARS2 (P0DTC1)» more
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| PDB [Detailed view] |
3 PDB
7FAC; 7MSW; 7MSX |