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PROSITE entry PS00202


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PURL: https://purl.expasy.org/prosite/signature/PS00202

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General information about the entry

Entry name [info] RUBREDOXIN
Accession [info] PS00202
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00179

Name and characterization of the entry

Description [info] Rubredoxin signature.
Pattern [info] 
[LIVM]-x-{G}-{R}-W-x-C-P-x-C-[AGD].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 51 in 48 different sequences
Number of true positive hits 48 in 45 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 6
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.12 %
Recall (true positives / (true positives + false negatives)) 88.89 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] iron at position 7
Site [info] iron at position 10
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 45 sequences 

ATG35_KOMPG (C4QVX6), HRB_MOOTA   (Q9FDN6), HUPJ_RHOCA  (Q03009), 

RUBH_METTH  (Q50533), RUBL_BRADU  (P48344), RUBL_RHILV  (P28151), 
RUBR1_ALCBS (Q0VTA9), RUBR1_DESDA (P04170), RUBR1_ECTOL (P12692), 
RUBR1_PSEAE (Q9HTK7), RUBR1_PSEPU (Q9WWW4), RUBR2_ALCBS (Q0VKZ2), 
RUBR2_CHLTE (P58993), RUBR2_CLOPE (P14072), RUBR2_DESDA (Q93PP8), 
RUBR2_ECTOL (P00272), RUBR2_PSEAE (Q9HTK8), RUBR2_PSEPU (Q9WWW5), 
RUBR2_RHOER (Q9AE63), RUBR3_CHLTE (P58025), RUBR3_RHOER (P0A4E8), 
RUBR3_RHOSQ (P0A4E9), RUBR4_RHOER (P0A4F0), RUBR4_RHOSQ (P0A4F1), 
RUBR_ACESD  (P23474), RUBR_ACIAD  (P42453), RUBR_AZOCH  (P48343), 
RUBR_AZOVI  (P30778), RUBR_BUTME  (P14071), RUBR_CHLTI  (P09947), 
RUBR_CLOAB  (Q9AL94), RUBR_CLOPA  (P00268), RUBR_CUPNH  (P31912), 
RUBR_HELMO  (P56263), RUBR_MEGEL  (P00271), RUBR_MEGGA  (P00270), 
RUBR_METTH  (O26258), RUBR_NITV2  (P00269), RUBR_NITV9  (P15412), 
RUBR_PEPAS  (P00267), RUBR_PYRAB  (Q9V099), RUBR_PYRFU  (P24297), 
RUBR_SYNY3  (P73068), RUBR_THETC  (P19500), RUBR_TREPA  (O83956)
» more

UniProtKB/Swiss-Prot
False negative sequences		 6 sequences 

RUBR1_CHLTE (P58992), RUBR1_CLOPE (Q8XMB2), RUBR1_METJA (Q58145), 

RUBR2_METJA (Q58150), RUBR_NOSS1  (Q9WWN1), RUBR_TRIV2  (Q9XBL8)
» more

UniProtKB/Swiss-Prot
False positive sequences		 3 sequences 

DHX34_HUMAN (Q14147), DHX34_MOUSE (Q9DBV3), STX19_BOVIN (Q0VCI2)


				
	

	

		PDB
[Detailed view]		
		
			95 PDB
			


			pdb_00001b13; pdb_00001b2j; pdb_00001b2o; pdb_00001bfy; pdb_00001bq8; pdb_00001bq9; pdb_00001brf; pdb_00001c09; pdb_00001caa; pdb_00001cad; pdb_00001e8j; pdb_00001fhh; 
			
				pdb_00001fhm; pdb_00001irn; pdb_00001iro; pdb_00001iu5; pdb_00001iu6; pdb_00001r0f; pdb_00001r0g; pdb_00001r0h; pdb_00001r0i; pdb_00001r0j; pdb_00001rb9; pdb_00001rdg; 
				pdb_00001rdv; pdb_00001rwd; pdb_00001s24; pdb_00001smm; pdb_00001smu; pdb_00001smw; pdb_00001spw; pdb_00001t9o; pdb_00001t9p; pdb_00001t9q; pdb_00001vcx; pdb_00001yk4; 
				pdb_00001yk5; pdb_00001zrp; pdb_00002dsx; pdb_00002kkd; pdb_00002pve; pdb_00002pvx; pdb_00002pya; pdb_00002ql0; pdb_00002rdv; pdb_00002v3b; pdb_00003kyu; pdb_00003kyv; 
				pdb_00003kyw; pdb_00003kyx; pdb_00003kyy; pdb_00003ryg; pdb_00003rz6; pdb_00003rzt; pdb_00003ss2; pdb_00004ar3; pdb_00004ar4; pdb_00004ar5; pdb_00004ar6; pdb_00004k9f; 
				pdb_00004mbs; pdb_00004rxn; pdb_00004xnv; pdb_00004xnw; pdb_00005ai2; pdb_00005ai3; pdb_00005nw3; pdb_00005ome; pdb_00005rxn; pdb_00005uiw; pdb_00005vbl; pdb_00006akx; 
				pdb_00006aky; pdb_00006bd4; pdb_00006gps; pdb_00006gpx; pdb_00006iiu; pdb_00006iiv; pdb_00006knm; pdb_00006li2; pdb_00006ln2; pdb_00006me6; pdb_00006me7; pdb_00006me8; 
				pdb_00006me9; pdb_00006nw0; pdb_00006nw1; pdb_00006rxn; pdb_00007f1t; pdb_00007rxn; pdb_00007sus; pdb_00008rxn; pdb_00009bkl; pdb_00009bkp; pdb_00009bkt
			
			

			» more