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We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
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Amos Bairoch

PROSITE entry PS00528


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PURL: https://purl.expasy.org/prosite/signature/PS00528

Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_S4E
Accession [info] PS00528
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-JUL-1999 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00457

Name and characterization of the entry

Description [info] Ribosomal protein S4e signature.
Pattern [info] 
H-x-K-R-[LIVMF]-[SANK]-x-P-x(2)-[WY]-x-[LIVM]-x-[KRP].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 74 in 74 different sequences
Number of true positive hits 74 in 74 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 30
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 71.15 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 74 sequences 

RS41_ARATH  (Q93VH9), RS42_ARATH  (P49204), RS43_ARATH  (Q8VYK6), 

RS4A_SCHPO  (P87158), RS4A_YEAST  (P0CX35), RS4B_SCHPO  (Q9USW5), 
RS4B_YEAST  (P0CX36), RS4C_SCHPO  (Q9P4W9), RS4E_ARCFU  (O28366), 
RS4E_HALLT  (B9LSR5), RS4E_HALMA  (P22510), RS4E_HALS3  (B0R668), 
RS4E_HALSA  (Q9HPC2), RS4E_IGNH4  (A8ACD4), RS4E_METAC  (Q8TRT5), 
RS4E_METAR  (Q0W1X6), RS4E_METJA  (P54039), RS4E_METKA  (Q8TW18), 
RS4E_METM5  (A4FWA9), RS4E_METM6  (A9A9Q2), RS4E_METM7  (A6VGZ7), 
RS4E_METMA  (Q8PV38), RS4E_METMP  (P62428), RS4E_METST  (Q2NFW9), 
RS4E_METTH  (O26123), RS4E_METVA  (P14023), RS4E_METVS  (A6UQ56), 
RS4E_NATPD  (Q3IMX6), RS4E_PYRAB  (Q9V1U8), RS4E_PYRFU  (Q8U011), 
RS4E_PYRHO  (O59430), RS4E_THEKO  (Q5JJG0), RS4X_CHLAE  (Q76N24), 
RS4X_DANRE  (Q642H9), RS4X_FELCA  (P62705), RS4X_HUMAN  (P62701), 
RS4X_MACFU  (Q76MY1), RS4X_MESAU  (P62704), RS4X_MONDO  (O62738), 
RS4X_MOUSE  (P62702), RS4X_RABIT  (G1TK17), RS4X_RAT(P62703), 
RS4Y1_GORGO (Q861U8), RS4Y1_HUMAN (P22090), RS4Y1_MACFU (P79183), 
RS4Y1_MONDO (O62739), RS4Y1_PANPA (Q861V0), RS4Y1_PANTR (Q861U9), 
RS4Y1_PONPY (Q861U7), RS4Y2_HUMAN (Q8TD47), RS4Y2_PANTR (Q6GVM7), 
RS4_BOMMO   (Q5UAP0), RS4_BOVIN   (P79103), RS4_CAEEL   (Q9N3X2), 
RS4_CANAL   (A0A1D8PCI6), RS4_CANAX   (P47837), RS4_CARGR   (Q4GXU6), 
RS4_CHICK   (P47836), RS4_CRIGR   (P47961), RS4_DICDI   (P51405), 
RS4_DROME   (P41042), RS4_GOSHI   (P46299), RS4_ICTPU   (Q90YS0), 
RS4_IXOSC   (Q4PMB3), RS4_LYSTE   (Q56FH2), RS4_MAIZE   (O22424), 
RS4_ORYSJ   (P49398), RS4_PRUAR   (O81363), RS4_SOLTU   (P46300), 
RS4_SPOFR   (Q95V34), RS4_TETTH   (P0C233), RS4_XENLA   (P49401), 
RS4_XENTR   (Q6PBC4), RS4_YARLI   (O59950)
» more

UniProtKB/Swiss-Prot
False negative sequences		 30 sequences 

RS4E_AERPE  (Q9YF85), RS4E_CALMQ  (A8MB20), RS4E_DESA1  (B8D5V8), 

RS4E_HYPBU  (A2BMD1), RS4E_KORCO  (B1L778), RS4E_META3  (A6UWV0), 
RS4E_METBF  (Q46GA7), RS4E_METHJ  (Q2FT37), RS4E_METS3  (A5UL76), 
RS4E_METS5  (A4YCX8), RS4E_NANEQ  (P62429), RS4E_PICTO  (Q6L1B5), 
RS4E_PYRAE  (Q8ZTD3), RS4E_PYRAR  (A4WLL4), RS4E_PYRCJ  (A3MWZ7), 
RS4E_PYRIL  (A1RS06), RS4E_PYRNV  (B1Y9S4), RS4E_SACI1  (C3NH97), 
RS4E_SACI2  (C3MQ71), RS4E_SACI3  (C3N5T9), RS4E_SACI4  (C3MVJ0), 
RS4E_SACI6  (C4KHG8), RS4E_SACI7  (C3NEF5), RS4E_SACS2  (Q9UX94), 
RS4E_STAMF  (A3DNB9), RS4E_SULAC  (O05634), RS4E_SULTO  (Q975J2), 
RS4E_THEAC  (Q56230), RS4E_THEVO  (Q97BW4), RS4_BIGNA   (Q40941)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

RS4_HORSE   (P55832)


				
	

	

		PDB
[Detailed view]		
		
			390 PDB
			


			pdb_00003j6x; pdb_00003j6y; pdb_00003j77; pdb_00003j78; pdb_00003jag; pdb_00003jah; pdb_00003jai; pdb_00004bts; pdb_00004d5l; pdb_00004d61; pdb_00004kzx; pdb_00004kzy; 
			
				pdb_00004kzz; pdb_00004u3m; pdb_00004u3n; pdb_00004u3u; pdb_00004u4n; pdb_00004u4o; pdb_00004u4q; pdb_00004u4r; pdb_00004u4u; pdb_00004u4y; pdb_00004u4z; pdb_00004u50; 
				pdb_00004u51; pdb_00004u52; pdb_00004u53; pdb_00004u55; pdb_00004u56; pdb_00004u6f; pdb_00004ug0; pdb_00004v5o; pdb_00004v6i; pdb_00004v6u; pdb_00004v6w; pdb_00004v6x; 
				pdb_00004v88; pdb_00004v8y; pdb_00004v8z; pdb_00004v92; pdb_00005a2q; pdb_00005aj0; pdb_00005dat; pdb_00005dc3; pdb_00005dge; pdb_00005dgf; pdb_00005dgv; pdb_00005fci; 
				pdb_00005fcj; pdb_00005flx; pdb_00005i4l; pdb_00005jb3; pdb_00005jbh; pdb_00005jpq; pdb_00005juo; pdb_00005jup; pdb_00005jus; pdb_00005jut; pdb_00005juu; pdb_00005k0y; 
				pdb_00005lks; pdb_00005ll6; pdb_00005lyb; pdb_00005lzu; pdb_00005m1j; pdb_00005mc6; pdb_00005mei; pdb_00005ndg; pdb_00005ndv; pdb_00005ndw; pdb_00005oa3; pdb_00005obm; 
				pdb_00005on6; pdb_00005t2c; pdb_00005tbw; pdb_00005tga; pdb_00005tgm; pdb_00005tzs; pdb_00005vyc; pdb_00005wlc; pdb_00005wyj; pdb_00005wyk; pdb_00006d90; pdb_00006eml; 
				pdb_00006fai; pdb_00006fec; pdb_00006g18; pdb_00006g4s; pdb_00006g4w; pdb_00006g51; pdb_00006g53; pdb_00006g5h; pdb_00006g5i; pdb_00006gq1; pdb_00006gqb; pdb_00006gqv; 
				pdb_00006hhq; pdb_00006i7o; pdb_00006ip5; pdb_00006ip6; pdb_00006ip8; pdb_00006ke6; pdb_00006lqp; pdb_00006lqq; pdb_00006lqr; pdb_00006lqs; pdb_00006lqt; pdb_00006lqu; 
				pdb_00006lqv; pdb_00006mtd; pdb_00006mte; pdb_00006ole; pdb_00006olf; pdb_00006olg; pdb_00006oli; pdb_00006olz; pdb_00006om0; pdb_00006om7; pdb_00006p4g; pdb_00006p4h; 
				pdb_00006p5i; pdb_00006p5j; pdb_00006p5k; pdb_00006p5n; pdb_00006q8y; pdb_00006qzp; pdb_00006r5q; pdb_00006r6g; pdb_00006r6p; pdb_00006r7q; pdb_00006rbd; pdb_00006rbe; 
				pdb_00006s47; pdb_00006sgc; pdb_00006skf; pdb_00006skg; pdb_00006snt; pdb_00006sv4; pdb_00006sw9; pdb_00006swc; pdb_00006swd; pdb_00006t4q; pdb_00006t7i; pdb_00006t7t; 
				pdb_00006t83; pdb_00006tb3; pdb_00006th6; pdb_00006tnu; pdb_00006w2s; pdb_00006w2t; pdb_00006wdr; pdb_00006woo; pdb_00006xa1; pdb_00006xiq; pdb_00006xir; pdb_00006xu6; 
				pdb_00006xu7; pdb_00006xu8; pdb_00006y0g; pdb_00006y2l; pdb_00006y57; pdb_00006y7c; pdb_00006yal; pdb_00006yam; pdb_00006yan; pdb_00006ybw; pdb_00006z6j; pdb_00006z6k; 
				pdb_00006z6l; pdb_00006z6m; pdb_00006z6n; pdb_00006zce; pdb_00006zlw; pdb_00006zm7; pdb_00006zme; pdb_00006zmi; pdb_00006zmo; pdb_00006zmt; pdb_00006zmw; pdb_00006zn5; 
				pdb_00006zoj; pdb_00006zok; pdb_00006zon; pdb_00006zp4; pdb_00006zqb; pdb_00006zqc; pdb_00006zqd; pdb_00006zqe; pdb_00006zqf; pdb_00006zqg; pdb_00006zu9; pdb_00006zuo; 
				pdb_00006zv6; pdb_00006zvh; pdb_00006zvi; pdb_00006zvj; pdb_00006zvk; pdb_00006zxd; pdb_00006zxe; pdb_00006zxf; pdb_00006zxg; pdb_00006zxh; pdb_00007a01; pdb_00007a09; 
				pdb_00007a1g; pdb_00007ajt; pdb_00007aju; pdb_00007b7d; pdb_00007cpu; pdb_00007cpv; pdb_00007d4i; pdb_00007d5t; pdb_00007d63; pdb_00007jqb; pdb_00007jqc; pdb_00007k5i; 
				pdb_00007ls1; pdb_00007ls2; pdb_00007mdz; pdb_00007mpi; pdb_00007mpj; pdb_00007mq8; pdb_00007mqa; pdb_00007n8b; pdb_00007nrc; pdb_00007nrd; pdb_00007oya; pdb_00007oyb; 
				pdb_00007oyc; pdb_00007oyd; pdb_00007pzy; pdb_00007q08; pdb_00007q0f; pdb_00007q0p; pdb_00007q0r; pdb_00007qgg; pdb_00007qp6; pdb_00007qp7; pdb_00007qvp; pdb_00007r4x; 
				pdb_00007syx; pdb_00007tql; pdb_00007wtl; pdb_00007wtm; pdb_00007wtn; pdb_00007wto; pdb_00007wtp; pdb_00007wtq; pdb_00007wtr; pdb_00007wts; pdb_00007wtt; pdb_00007wtu; 
				pdb_00007wtv; pdb_00007wtw; pdb_00007wtx; pdb_00007wtz; pdb_00007wu0; pdb_00007xnx; pdb_00007xny; pdb_00007zag; pdb_00007zah; pdb_00007zai; pdb_00007zhg; pdb_00007zjw; 
				pdb_00007zjx; pdb_00007zpq; pdb_00007zrs; pdb_00007zuw; pdb_00007zux; pdb_00007zw0; pdb_00008bhf; pdb_00008bn3; pdb_00008bqd; pdb_00008bqx; pdb_00008btk; pdb_00008c00; 
				pdb_00008c01; pdb_00008c3a; pdb_00008c83; pdb_00008cah; pdb_00008cas; pdb_00008cbj; pdb_00008ccs; pdb_00008cdl; pdb_00008cdr; pdb_00008ceh; pdb_00008cf5; pdb_00008cg8; 
				pdb_00008cgn; pdb_00008civ; pdb_00008cku; pdb_00008cmj; pdb_00008cq7; pdb_00008cqw; pdb_00008cre; pdb_00008eub; pdb_00008evp; pdb_00008evq; pdb_00008evr; pdb_00008evs; 
				pdb_00008evt; pdb_00008ewb; pdb_00008ewc; pdb_00008g5y; pdb_00008g60; pdb_00008g61; pdb_00008g6j; pdb_00008glp; pdb_00008ifd; pdb_00008ife; pdb_00008jdj; pdb_00008jdk; 
				pdb_00008jdl; pdb_00008jdm; pdb_00008k2c; pdb_00008k2d; pdb_00008k82; pdb_00008oeq; pdb_00008ogj; pdb_00008oh6; pdb_00008oi5; pdb_00008oj3; pdb_00008oz0; pdb_00008p03; 
				pdb_00008p09; pdb_00008p2k; pdb_00008p4v; pdb_00008p9a; pdb_00008pj1; pdb_00008pj2; pdb_00008pj3; pdb_00008pj4; pdb_00008pj5; pdb_00008pj6; pdb_00008ppk; pdb_00008ppl; 
				pdb_00008q5i; pdb_00008q7z; pdb_00008q87; pdb_00008qoi; pdb_00008scb; pdb_00008t2x; pdb_00008t2y; pdb_00008t2z; pdb_00008t30; pdb_00008t3a; pdb_00008t3b; pdb_00008t3c; 
				pdb_00008t3d; pdb_00008t3e; pdb_00008t3f; pdb_00008t4s; pdb_00008ukb; pdb_00008ut0; pdb_00008uti; pdb_00008vft; pdb_00008xp2; pdb_00008xp3; pdb_00008xsx; pdb_00008xsy; 
				pdb_00008xsz; pdb_00008xu8; pdb_00008xxl; pdb_00008xxm; pdb_00008xxn; pdb_00008y0u; pdb_00008y0w; pdb_00008y0x; pdb_00008yld; pdb_00008ylr; pdb_00008yoo; pdb_00008yop; 
				pdb_00008z70; pdb_00008z71; pdb_00008zdb; pdb_00008zdc; pdb_00008zdd; pdb_00009axt; pdb_00009axv; pdb_00009bh5; pdb_00009bkd; pdb_00009bln; pdb_00009c3h; pdb_00009cai; 
				pdb_00009f1b; pdb_00009f1c; pdb_00009f1d; pdb_00009f9s; pdb_00009g8m; pdb_00009g8o
			
			

			» more