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We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

PROSITE entry PS00578


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PURL: https://purl.expasy.org/prosite/signature/PS00578

Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_S6E
Accession [info] PS00578
Entry type [info] PATTERN
Date [info] 01-DEC-1991 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00500

Name and characterization of the entry

Description [info] Ribosomal protein S6e signature.
Pattern [info]
[LIVM]-[STAMR]-G-G-x-[DG]-x(2)-G-x-[PV]-M.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 80 in 80 different sequences
Number of true positive hits 77 in 77 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 17
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.25 %
Recall (true positives / (true positives + false negatives)) 81.91 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
77 sequences

RS62_ARATH  (P51430), RS6A_CANAL  (A0A1D8PL99), RS6A_SCHPO  (P05752), 
RS6A_YEAST  (P0CX37), RS6B_SCHPO  (Q9C0Z7), RS6B_YEAST  (P0CX38), 
RS6E_AERPE  (Q9Y9B6), RS6E_ARCFU  (O29739), RS6E_CALMQ  (A8MA52), 
RS6E_HALLT  (B9LR51), RS6E_HALMA  (P21509), RS6E_HALS3  (B0R815), 
RS6E_HALSA  (Q9HMJ5), RS6E_HALWD  (Q18DP5), RS6E_HYPBU  (A2BJZ7), 
RS6E_METAC  (Q8TQL4), RS6E_METAR  (Q0W8B4), RS6E_METBF  (Q466D6), 
RS6E_METBU  (Q12Z92), RS6E_METJA  (P54067), RS6E_METKA  (Q8TVE6), 
RS6E_METMA  (Q8PU79), RS6E_METS5  (A4YIY0), RS6E_METST  (Q2NGM7), 
RS6E_METTH  (O26360), RS6E_NANEQ  (Q74MJ5), RS6E_NATPD  (Q3ISW0), 
RS6E_NITMS  (A9A110), RS6E_PYRAB  (Q9UYS3), RS6E_PYRAE  (Q8ZX25), 
RS6E_PYRAR  (A4WIK0), RS6E_PYRCJ  (A3MUD0), RS6E_PYRFU  (Q8U3H8), 
RS6E_PYRHO  (O58349), RS6E_PYRIL  (A1RUW1), RS6E_PYRNV  (B1YCP4), 
RS6E_SACI2  (C3MR04), RS6E_SACI3  (C3MZ52), RS6E_SACI4  (C3MWZ2), 
RS6E_SACI6  (C4KID0), RS6E_SACI7  (C3N772), RS6E_SACS2  (Q980A6), 
RS6E_STAMF  (A3DMS1), RS6E_SULTO  (Q975N7), RS6E_THEKO  (Q5JDK8), 
RS6E_THEON  (B6YW70), RS6E_THESM  (C6A2D7), RS6_AEDAE   (Q9U761), 
RS6_AEDAL   (Q9U762), RS6_APLCA   (Q9BMX5), RS6_ASPOF   (Q9M3V8), 
RS6_BOVIN   (Q5E995), RS6_BRAFL   (O01727), RS6_CANGA   (Q6FJH3), 
RS6_CHICK   (P47838), RS6_DEBHA   (Q6BXH8), RS6_DICDI   (Q54UU3), 
RS6_DROME   (P29327), RS6_ENCCU   (Q8SRY0), RS6_EREGS   (Q74ZK3), 
RS6_GLOMM   (Q2PQM1), RS6_HUMAN   (P62753), RS6_ICTPU   (Q90YR8), 
RS6_KLULA   (Q6CM04), RS6_KLUMA   (P41798), RS6_LEIIN   (O44012), 
RS6_LEIMA   (Q9NE83), RS6_MACFA   (Q4R4K6), RS6_MANSE   (Q94624), 
RS6_MOUSE   (P62754), RS6_ONCMY   (Q9YGF2), RS6_RABIT   (G1TM55), 
RS6_RAT (P62755), RS6_SPOFR   (Q95V32), RS6_TOBAC   (P29345), 
RS6_XENLA   (P39017), RS6_YARLI   (Q6C169)
» more

UniProtKB/Swiss-Prot
False negative sequences
17 sequences

RS61_ARATH  (O48549), RS6E_METB6  (A7IAP8), RS6E_METHJ  (Q2FU50), 
RS6E_METLZ  (A2STM7), RS6E_METM5  (A4FWX0), RS6E_METM6  (A9AAA5), 
RS6E_METM7  (A6VGE7), RS6E_METMJ  (A3CSP5), RS6E_METMP  (Q6LXY7), 
RS6E_METPE  (B8GJR6), RS6E_METS3  (A5UJM8), RS6E_PICTO  (Q6L1H6), 
RS6E_SULAC  (Q4JAI1), RS6E_THEAC  (Q9HLA6), RS6E_THEGJ  (C5A7C4), 
RS6E_THEVO  (Q978W7), RS6_CAEEL   (Q9NEN6)
» more

UniProtKB/Swiss-Prot
False positive sequences
3 sequences

BCL9L_HUMAN (Q86UU0), BCL9L_MOUSE (Q67FY2), Y886_HAEIN  (P44069)

		
PDB
[Detailed view]
441 PDB

pdb_00003j16; pdb_00003j6x; pdb_00003j6y; pdb_00003j77; pdb_00003j78; pdb_00003j80; pdb_00003j81; pdb_00003jag; pdb_00003jah; pdb_00003jai; pdb_00003jam; pdb_00003jap; pdb_00004d5l; pdb_00004d61; pdb_00004kzx; pdb_00004kzy; pdb_00004kzz; pdb_00004u3m; pdb_00004u3n; pdb_00004u3u; pdb_00004u4n; pdb_00004u4o; pdb_00004u4q; pdb_00004u4r; pdb_00004u4u; pdb_00004u4y; pdb_00004u4z; pdb_00004u50; pdb_00004u51; pdb_00004u52; pdb_00004u53; pdb_00004u55; pdb_00004u56; pdb_00004u6f; pdb_00004ug0; pdb_00004v4n; pdb_00004v6u; pdb_00004v6w; pdb_00004v6x; pdb_00004v88; pdb_00004v8y; pdb_00004v8z; pdb_00004v92; pdb_00005a2q; pdb_00005aj0; pdb_00005dat; pdb_00005dc3; pdb_00005dge; pdb_00005dgf; pdb_00005dgv; pdb_00005fci; pdb_00005fcj; pdb_00005flx; pdb_00005i4l; pdb_00005it7; pdb_00005it9; pdb_00005jb3; pdb_00005jbh; pdb_00005juo; pdb_00005jup; pdb_00005jus; pdb_00005jut; pdb_00005juu; pdb_00005k0y; pdb_00005lks; pdb_00005ll6; pdb_00005lyb; pdb_00005lzs; pdb_00005lzt; pdb_00005lzu; pdb_00005lzv; pdb_00005lzw; pdb_00005lzx; pdb_00005lzy; pdb_00005lzz; pdb_00005m1j; pdb_00005mc6; pdb_00005mei; pdb_00005ndg; pdb_00005ndv; pdb_00005ndw; pdb_00005oa3; pdb_00005obm; pdb_00005on6; pdb_00005osg; pdb_00005t2c; pdb_00005tbw; pdb_00005tga; pdb_00005tgm; pdb_00005tzs; pdb_00005vyc; pdb_00005wlc; pdb_00005wyj; pdb_00006az1; pdb_00006d90; pdb_00006d9j; pdb_00006eml; pdb_00006fai; pdb_00006fec; pdb_00006fyx; pdb_00006fyy; pdb_00006g18; pdb_00006g4s; pdb_00006g4w; pdb_00006g51; pdb_00006g53; pdb_00006g5h; pdb_00006g5i; pdb_00006gq1; pdb_00006gqb; pdb_00006gqv; pdb_00006gsm; pdb_00006gsn; pdb_00006gz3; pdb_00006hcf; pdb_00006hcj; pdb_00006hcm; pdb_00006hcq; pdb_00006hhq; pdb_00006i7o; pdb_00006ip5; pdb_00006ip6; pdb_00006ip8; pdb_00006ke6; pdb_00006lqp; pdb_00006lqq; pdb_00006lqr; pdb_00006lqs; pdb_00006lqt; pdb_00006lqu; pdb_00006lqv; pdb_00006mtb; pdb_00006mtc; pdb_00006mtd; pdb_00006mte; pdb_00006ole; pdb_00006olf; pdb_00006olg; pdb_00006oli; pdb_00006olz; pdb_00006om0; pdb_00006om7; pdb_00006p4g; pdb_00006p4h; pdb_00006p5i; pdb_00006p5j; pdb_00006p5k; pdb_00006p5n; pdb_00006q8y; pdb_00006qzp; pdb_00006r5q; pdb_00006r6g; pdb_00006r6p; pdb_00006r7q; pdb_00006rbd; pdb_00006rbe; pdb_00006s47; pdb_00006sgc; pdb_00006skf; pdb_00006skg; pdb_00006snt; pdb_00006sv4; pdb_00006sw9; pdb_00006swc; pdb_00006swd; pdb_00006t4q; pdb_00006t7i; pdb_00006t7t; pdb_00006t83; pdb_00006tb3; pdb_00006th6; pdb_00006tnu; pdb_00006uz7; pdb_00006w2s; pdb_00006w2t; pdb_00006wdr; pdb_00006woo; pdb_00006xa1; pdb_00006xiq; pdb_00006xir; pdb_00006xu6; pdb_00006xu7; pdb_00006xu8; pdb_00006y0g; pdb_00006y2l; pdb_00006y57; pdb_00006y7c; pdb_00006yam; pdb_00006ybw; pdb_00006z6j; pdb_00006z6k; pdb_00006z6l; pdb_00006z6m; pdb_00006z6n; pdb_00006zce; pdb_00006zlw; pdb_00006zm7; pdb_00006zme; pdb_00006zmi; pdb_00006zmo; pdb_00006zmt; pdb_00006zmw; pdb_00006zn5; pdb_00006zoj; pdb_00006zok; pdb_00006zon; pdb_00006zp4; pdb_00006zqb; pdb_00006zqc; pdb_00006zqd; pdb_00006zqe; pdb_00006zqf; pdb_00006zqg; pdb_00006zu9; pdb_00006zuo; pdb_00006zv6; pdb_00006zvh; pdb_00006zvi; pdb_00006zvj; pdb_00006zvk; pdb_00006zxd; pdb_00006zxe; pdb_00006zxf; pdb_00006zxg; pdb_00006zxh; pdb_00007a01; pdb_00007a09; pdb_00007a1g; pdb_00007ajt; pdb_00007aju; pdb_00007b7d; pdb_00007cpu; pdb_00007cpv; pdb_00007d4i; pdb_00007d5t; pdb_00007d63; pdb_00007k5i; pdb_00007ls1; pdb_00007ls2; pdb_00007mdz; pdb_00007mpi; pdb_00007mpj; pdb_00007mq8; pdb_00007mq9; pdb_00007mqa; pdb_00007n8b; pdb_00007nrc; pdb_00007nrd; pdb_00007o7y; pdb_00007o7z; pdb_00007o80; pdb_00007o81; pdb_00007oyd; pdb_00007pzy; pdb_00007q08; pdb_00007q0f; pdb_00007q0p; pdb_00007q0r; pdb_00007qep; pdb_00007qgg; pdb_00007qp6; pdb_00007qp7; pdb_00007qvp; pdb_00007r4x; pdb_00007suk; pdb_00007toq; pdb_00007tor; pdb_00007tql; pdb_00007ucj; pdb_00007uck; pdb_00007wtl; pdb_00007wtm; pdb_00007wtn; pdb_00007wto; pdb_00007wtp; pdb_00007wtq; pdb_00007wtr; pdb_00007wts; pdb_00007wtt; pdb_00007wtu; pdb_00007wtv; pdb_00007wtw; pdb_00007wtx; pdb_00007wtz; pdb_00007wu0; pdb_00007xnx; pdb_00007xny; pdb_00007zag; pdb_00007zah; pdb_00007zai; pdb_00007zhg; pdb_00007zjw; pdb_00007zjx; pdb_00007zpq; pdb_00007zrs; pdb_00007zuw; pdb_00007zux; pdb_00007zw0; pdb_00008a3w; pdb_00008a98; pdb_00008bhf; pdb_00008bn3; pdb_00008bqd; pdb_00008bqx; pdb_00008btk; pdb_00008c00; pdb_00008c01; pdb_00008c3a; pdb_00008c83; pdb_00008cah; pdb_00008cas; pdb_00008cbj; pdb_00008ccs; pdb_00008cdl; pdb_00008cdr; pdb_00008ceh; pdb_00008cf5; pdb_00008cg8; pdb_00008cgn; pdb_00008civ; pdb_00008cku; pdb_00008cmj; pdb_00008eub; pdb_00008evp; pdb_00008evq; pdb_00008evr; pdb_00008evs; pdb_00008evt; pdb_00008ewb; pdb_00008ewc; pdb_00008g5y; pdb_00008g5z; pdb_00008g60; pdb_00008g61; pdb_00008g6j; pdb_00008glp; pdb_00008i7j; pdb_00008ifd; pdb_00008ife; pdb_00008jdj; pdb_00008jdk; pdb_00008jdl; pdb_00008jdm; pdb_00008k2c; pdb_00008k2d; pdb_00008k82; pdb_00008ogj; pdb_00008oh6; pdb_00008oi5; pdb_00008oj3; pdb_00008ovj; pdb_00008oz0; pdb_00008p2k; pdb_00008p4v; pdb_00008p9a; pdb_00008pj1; pdb_00008pj2; pdb_00008pj3; pdb_00008pj4; pdb_00008pj5; pdb_00008pj6; pdb_00008ppk; pdb_00008ppl; pdb_00008q7z; pdb_00008q87; pdb_00008qhu; pdb_00008qie; pdb_00008qoi; pdb_00008rw1; pdb_00008rxh; pdb_00008rxx; pdb_00008s8d; pdb_00008s8e; pdb_00008s8f; pdb_00008s8g; pdb_00008s8h; pdb_00008s8i; pdb_00008s8j; pdb_00008s8k; pdb_00008scb; pdb_00008t2x; pdb_00008t2y; pdb_00008t2z; pdb_00008t30; pdb_00008t3a; pdb_00008t3b; pdb_00008t3c; pdb_00008t3d; pdb_00008t3e; pdb_00008t3f; pdb_00008t4s; pdb_00008ukb; pdb_00008ut0; pdb_00008uti; pdb_00008vft; pdb_00008xp2; pdb_00008xp3; pdb_00008xsx; pdb_00008xsy; pdb_00008xsz; pdb_00008xu8; pdb_00008xxl; pdb_00008xxm; pdb_00008xxn; pdb_00008y0u; pdb_00008y0w; pdb_00008y0x; pdb_00008yld; pdb_00008ylr; pdb_00008yoo; pdb_00008yop; pdb_00008z70; pdb_00008z71; pdb_00008zdb; pdb_00008zdc; pdb_00008zdd; pdb_00009axt; pdb_00009axv; pdb_00009bdl; pdb_00009bdn; pdb_00009bdp; pdb_00009bkd; pdb_00009bln; pdb_00009c3h; pdb_00009c8k; pdb_00009e71; pdb_00009e7f; pdb_00009f1b; pdb_00009f1c; pdb_00009f1d; pdb_00009f9s; pdb_00009fhl; pdb_00009fra; pdb_00009frk; pdb_00009frl; pdb_00009fs6; pdb_00009fs8; pdb_00009fsf; pdb_00009fy0; pdb_00009g8m; pdb_00009g8o
» more