We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
PROSITE entry PS00583
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PURL: https://purl.expasy.org/prosite/signature/PS00583
Direct ScanProsite submission
General information about the entry
| Entry name [info] | PFKB_KINASES_1 |
| Accession [info] | PS00583 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1991 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00504 |
Name and characterization of the entry
| Description [info] | pfkB family of carbohydrate kinases signature 1. |
| Pattern [info] |
[AG]-G-x(0,1)-[GAP]-x-N-{AGLS}-[STA]-x(2)-{A}-x-{G}-{GNKA}-[GS]-x(9)-G.
|
Numerical results [info]
| Total number of hits | 272 in 272 different sequences |
| Number of true positive hits | 254 in 254 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 18 in 18 different sequences |
| Number of false negative sequences | 139 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 93.38 % |
| Recall (true positives / (true positives + false negatives)) | 64.63 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
254 sequences
ADOK_MYCBO (P83736), ADOK_MYCTA (A5U4N0), ADOK_MYCTO (P9WID4), ADOK_MYCTU (P9WID5), FRLD_ECO57 (Q8X839), FRLD_ECOLI (P45543), FRLD_SHIFL (Q83JB1), HEPPK_BORBR (Q7WGU8), HLDE_ACTP2 (A3MZC0), HLDE_ACTPL (Q8GLU7), HLDE_AERHH (A0KPL4), HLDE_AERS4 (A4SIG6), HLDE_ALCBS (Q0VM60), HLDE_ALIF1 (Q5E2L7), HLDE_ALIFM (B5FB67), HLDE_ALISL (B6ELZ7), HLDE_ALKEH (Q0A4T7), HLDE_AZOVD (C1DGT9), HLDE_BLOFL (Q7VQQ6), HLDE_BLOPB (Q493X3), HLDE_BRADU (Q89HR3), HLDE_BRASB (A5EN78), HLDE_BRASO (A4YYB6), HLDE_CAUSK (B0T663), HLDE_CAUVC (Q9A2C5), HLDE_CHRSD (Q1R1M6), HLDE_CITK8 (A8APT1), HLDE_COXBN (A9KDJ2), HLDE_COXBR (A9N9S2), HLDE_COXBU (Q83B60), HLDE_CROS8 (A7MP93), HLDE_DICNV (A5EWS4), HLDE_ECO24 (A7ZRT3), HLDE_ECO27 (B7UIW0), HLDE_ECO45 (B7MAC8), HLDE_ECO55 (B7LGY7), HLDE_ECO57 (Q7AAQ7), HLDE_ECO5E (B5YR91), HLDE_ECO7I (B7NJR5), HLDE_ECO81 (B7N0K1), HLDE_ECO8A (B7LZK1), HLDE_ECOBW (C4ZQW9), HLDE_ECODH (B1XG57), HLDE_ECOHS (A8A4K6), HLDE_ECOK1 (A1AFX4), HLDE_ECOL5 (Q0TD55), HLDE_ECOL6 (Q8FDH5), HLDE_ECOLC (B1IRR4), HLDE_ECOLI (P76658), HLDE_ECOLU (B7ND40), HLDE_ECOSE (B6I423), HLDE_ECOSM (B1LF43), HLDE_ECOUT (Q1R6S9), HLDE_ECTM1 (A4XPU9), HLDE_EDWI9 (C5BHH2), HLDE_ENT38 (A4WEI4), HLDE_ERWT9 (B2VGJ9), HLDE_ESCF3 (B7LQC9), HLDE_GEOMG (Q39X60), HLDE_GEOSL (Q74BF6), HLDE_GRABC (Q0BUU1), HLDE_HAHCH (Q2SN34), HLDE_HALHL (A1WZB3), HLDE_HELAH (Q17WK1), HLDE_HYDCU (Q31IC2), HLDE_HYPNA (Q0C190), HLDE_KLEP3 (B5XU40), HLDE_KLEP7 (A6TE31), HLDE_KORVE (Q1IJZ0), HLDE_MAGMM (A0L7X0), HLDE_MARMS (A6W0Z9), HLDE_METCA (Q607M3), HLDE_NITHX (Q1QNS3), HLDE_NITOC (Q3J7Y0), HLDE_NITWN (Q3STQ8), HLDE_PARL1 (A7HUC7), HLDE_PECAS (Q6D164), HLDE_PECCP (C6DDL3), HLDE_PHOLL (Q7N0C3), HLDE_PHOPR (Q6LUZ5), HLDE_PROMH (B4EW46), HLDE_PSE14 (Q48P39), HLDE_PSEA8 (B7V388), HLDE_PSEAB (Q02F21), HLDE_PSEAE (Q9HUG9), HLDE_PSEE4 (Q1I411), HLDE_PSEF5 (Q4KJA9), HLDE_PSEFS (C3KDB8), HLDE_PSEP1 (A5W9W6), HLDE_PSEP7 (A6VDB5), HLDE_PSEPF (Q3KJ28), HLDE_PSEPG (B0KL32), HLDE_PSEPK (Q88D93), HLDE_PSEPW (B1J331), HLDE_PSESM (Q87VF4), HLDE_PSEU2 (Q4ZZ15), HLDE_PSYIN (A1SZY2), HLDE_RHOP2 (Q2IZP7), HLDE_RHOP5 (Q07RN1), HLDE_RHOPA (Q6N2R5), HLDE_RHOPB (Q219E2), HLDE_RHOPS (Q13AN7), HLDE_RHOPT (B3QJ47), HLDE_SALA4 (B5F696), HLDE_SALAR (A9MPW3), HLDE_SALCH (Q57JQ9), HLDE_SALDC (B5FHT5), HLDE_SALEP (B5QZ36), HLDE_SALG2 (B5REF8), HLDE_SALHS (B4TI51), HLDE_SALNS (B4T670), HLDE_SALPA (Q5PC86), HLDE_SALPB (A9N5X8), HLDE_SALPC (C0PYX3), HLDE_SALPK (B5BG11), HLDE_SALSV (B4TVT4), HLDE_SALTI (Q8XEW9), HLDE_SALTY (Q7CPR9), HLDE_SERP5 (A8GJU3), HLDE_SHEAM (A1S3I3), HLDE_SHEB2 (B8EE43), HLDE_SHEB5 (A3D837), HLDE_SHEB8 (A6WJS7), HLDE_SHEB9 (A9L2P0), HLDE_SHEDO (Q12RC7), HLDE_SHEFN (Q07Y78), HLDE_SHEHH (B0TTF2), HLDE_SHELP (A3QAN3), HLDE_SHEON (Q8EAZ2), HLDE_SHEPA (A8H086), HLDE_SHEPC (A4Y9Z9), HLDE_SHEPW (B8CVJ1), HLDE_SHESA (A0KTG8), HLDE_SHESH (A8FZZ3), HLDE_SHESM (Q0HFL0), HLDE_SHESR (Q0HYC0), HLDE_SHESW (A1RGD1), HLDE_SHIB3 (B2U1F7), HLDE_SHIBS (Q31WY3), HLDE_SHIDS (Q32BR2), HLDE_SHIF8 (Q0T0L1), HLDE_SHIFL (Q7UBI8), HLDE_SHISS (Q3YXJ0), HLDE_SODGM (Q2NWD9), HLDE_STUS1 (A4VR47), HLDE_TRIL1 (B3E5M9), HLDE_VIBA3 (B7VIX1), HLDE_VIBC1 (A7MWN3), HLDE_VIBC3 (A5F5J2), HLDE_VIBCM (C3LQY0), HLDE_VIBPA (Q87SJ9), HLDE_VIBVU (Q8DEH7), HLDE_VIBVY (Q7MNY3), HLDE_YERE8 (A1JQV6), HLDE_YERP3 (A7FE79), HLDE_YERPA (Q1C374), HLDE_YERPB (B2K2H4), HLDE_YERPE (Q8ZI60), HLDE_YERPG (A9R7D5), HLDE_YERPN (Q1CMD4), HLDE_YERPP (A4THT9), HLDE_YERPS (Q665V3), HLDE_YERPY (B1JM26), K1PF_BORBU (O51575), K1PF_ECO57 (P0AEX1), K1PF_ECOL6 (P0AEX0), K1PF_ECOLI (P0AEW9), K1PF_HAEIN (P44330), K1PF_MYCGE (Q49396), K1PF_MYCPN (P75038), K1PF_RHOCA (P23386), K1PF_SHIFL (P0AEX2), K1PF_VIBCH (Q9KM71), K1PF_XANCP (P23354), LACC1_STRA3 (Q8E4R7), LACC2_STRA3 (Q8E346), LACC_ENTFA (Q833W9), LACC_LACLL (P23391), LACC_STAA1 (A7X575), LACC_STAA2 (A6U3S3), LACC_STAA3 (Q2FET9), LACC_STAA8 (P0A0B9), LACC_STAA9 (A5IUY2), LACC_STAAB (Q2YYJ5), LACC_STAAC (Q5HE12), LACC_STAAE (A6QJ37), LACC_STAAM (P65698), LACC_STAAN (P65699), LACC_STAAR (Q6GEN6), LACC_STAAS (Q6G7C1), LACC_STAAT (A8YYG0), LACC_STAAW (P0A0B8), LACC_STAEQ (Q5HM37), LACC_STAES (Q8CRJ4), LACC_STAHJ (Q4L872), LACC_STRA1 (Q3JZ20), LACC_STRA5 (Q8DXC2), LACC_STRMU (P26421), LACC_STRP1 (Q99Y14), LACC_STRP2 (Q04KC3), LACC_STRP4 (B5E4T0), LACC_STRP7 (C1C7G0), LACC_STRPB (Q1J9U8), LACC_STRPC (Q1JJZ7), LACC_STRPD (Q1JEY9), LACC_STRPI (B1IBZ5), LACC_STRPJ (B8ZQ64), LACC_STRPM (Q48RC4), LACC_STRPN (Q97QL2), LACC_STRPS (B2IPT7), LACC_STRPZ (B5XII4), LACC_STRR6 (Q8DPP1), LACC_STRSV (A3CPH5), LACC_STRU0 (B9DU93), LACC_STRZJ (C1CEF2), LACC_STRZP (C1CKT7), LACC_STRZT (C1CRA6), NK_METJA(Q57849), NK_METTH(O27587), PFKB_ECOLI (P06999), PFKB_MYCTO (P9WID2), PFKB_MYCTU (P9WID3), PFKB_THETC (D9TT10), PSUK_ECOLI (P30235), PUKI_ARATH (Q94AT3), SCKL1_ARATH (Q9M394), SCRK1_ARATH (Q9SID0), SCRK1_MAIZE (Q6XZ79), SCRK1_ORYSI (A2WXV8), SCRK1_ORYSJ (Q0JGZ6), SCRK2_ARATH (Q9LNE3), SCRK2_MAIZE (Q6XZ78), SCRK2_ORYSI (A2YQL4), SCRK2_ORYSJ (Q0J8G4), SCRK2_SOLHA (Q7XJ81), SCRK2_SOLLC (Q42896), SCRK3_ARATH (Q9LNE4), SCRK4_ARATH (Q9M1B9), SCRK5_ARATH (O82616), SCRK6_ARATH (Q9C524), SCRK7_ARATH (Q9FLH8), SCRK_ECOLX (P40713), SCRK_KLEPN (P26420), SCRK_SALTM (P26984), SCRK_SOLTU (P37829), SCRK_VIBAL (P22824), Y057_BUCAP (Q8KA54), Y060_BUCAI (P57168), Y1459_PYRHO (O59128), YDJE_BACSU (O34768), YDJH_ECOLI (P77493), YEGV_ECOLI (P76419), YEII_ECOLI (P33020), YOW5_SCHPO (Q9USY1)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
139 sequences
ADK1_ARATH (Q9SF85), ADK2_ARATH (Q9LZG0), ADK_CRIGR (P55262), ADK_DICDI (Q54MB5), ADK_HUMAN (P55263), ADK_MOUSE (P55264), ADK_PHYPA (O49923), ADK_RAT (Q64640), ADK_SCHCO (O93919), ADK_SCHPO (P78825), ADK_TOXGO (Q9TVW2), ADK_YEAST (P47143), AIRSK_SALTY (Q8ZKR2), CYDK_THEKO (Q5JEK6), DEOK_SALTI (P0DX97), DEOK_SALTY (Q7CPF5), FRLD_BACSU (O32153), HLDE_ACICJ (A5FVE7), HLDE_ACTSZ (A6VP06), HLDE_ALIB4 (A8EVR4), HLDE_AZOC5 (A8I5B0), HLDE_CAMC1 (A7ZE26), HLDE_CAMC5 (A7GZF6), HLDE_CAMFF (A0RQR9), HLDE_CAMJ8 (A8FMK8), HLDE_CAMJD (A7H2L7), HLDE_CAMJE (Q6TG09), HLDE_CAMJJ (A1W0D6), HLDE_CAMJR (Q5HTW1), HLDE_CITBB (B5EEZ1), HLDE_DESAL (B8FB71), HLDE_GEOUR (A5G6F4), HLDE_GLUDA (A9HDB1), HLDE_GLUOX (Q5FS52), HLDE_HAEDU (Q7VM30), HLDE_HAEI8 (Q4QKN8), HLDE_HAEIE (A5UCC3), HLDE_HAEIG (A5UEH8), HLDE_HAEIN (O05074), HLDE_HELHP (Q7VFZ3), HLDE_HELP2 (B6JM82), HLDE_HELPG (B5Z7L8), HLDE_HELPH (Q1CT14), HLDE_HELPJ (Q9ZKZ0), HLDE_HELPS (B2USX2), HLDE_HELPY (O25529), HLDE_HISS1 (Q0I1X5), HLDE_MANSM (Q65T41), HLDE_MARN8 (A1TYR4), HLDE_METFK (Q1H3A0), HLDE_NITSB (A6Q4Z6), HLDE_PARM1 (Q2W993), HLDE_PASMU (Q9CME6), HLDE_PELPD (A1AV12), HLDE_PSET1 (Q3IHX7), HLDE_RHILO (Q98I54), HLDE_RHORT (Q2RY67), HLDE_STRCO (Q9Z5B5), HLDE_SULDN (Q30T22), HLDE_SYNC1 (Q3A526), HLDE_WOLSU (Q7M9U1), INGK_ECO57 (P0AEW8), INGK_ECOL6 (P0AEW7), INGK_ECOLI (P0AEW6), INGK_EXIAC (O24767), IOLC1_BACCZ (Q63B75), IOLC2_BACCZ (Q4V1F7), IOLC_BACAA (C3PAZ0), IOLC_BACAC (C3LHY4), IOLC_BACAH (A0REB4), IOLC_BACAN (Q81QB7), IOLC_BACC3 (C1EVJ1), IOLC_BACHK (Q6HIK4), IOLC_BACLD (Q65D02), IOLC_BACSU (P42414), IOLC_BACVZ (A7ZAH9), IOLC_CLOB8 (A6M229), IOLC_CLOBA (B2V4J8), IOLC_CLOBB (B2TJ78), IOLC_CLOP1 (Q0TUZ4), IOLC_CLOPE (Q8XP78), IOLC_CLOTE (Q898F0), IOLC_GEOKA (Q5KYR3), IOLC_GEOTN (A4IPB3), IOLC_HALH5 (Q9KAG8), IOLC_LACCA (A5YBJ5), IOLC_LISIN (Q92EQ5), IOLC_LISMC (C1KZA1), IOLC_LISMF (Q723S9), IOLC_LISMH (B8DCT6), IOLC_LISMO (Q8Y9Y2), IOLC_MESH2 (Q601P9), IOLC_MESH7 (Q4A8D9), IOLC_MESHJ (Q4AAB0), IOLC_PHOPR (Q6LK43), IOLC_SHOC1 (Q5WKY9), K1PF_BACSU (O31714), K1PF_HALVD (D4GYE6), KDGK_BACSU (P50845), KDGK_DICD3 (P45416), KDGK_ECOLI (P37647), KDGK_HAEIN (P44482), KDGK_PSEA6 (Q15UF1), KHK_HUMAN (P50053), KHK_MOUSE (P97328), KHK_PONAB (Q5RD71), KHK_RAT (Q02974), LACC_CLOPE (Q8XNK5), LACC_STRP3 (P0DC12), LACC_STRP6 (Q5X9Y3), LACC_STRP8 (Q8NZD9), LACC_STRPF (Q1J4Q3), LACC_STRPG (A2RGF2), LACC_STRPQ (P0DC13), NK_THEAC(Q9HJT3), R1PKD_THEKO (Q5JDG9), R1PKT_HALXS (F8D4I6), RBSKI_FRUSL (P83534), RBSK_BACSU (P36945), RBSK_DICDI (Q54UQ4), RBSK_ECO57 (P0A9J7), RBSK_ECOLI (P0A9J6), RBSK_HAEIN (P44331), RBSK_HALH5 (Q9K6K1), RBSK_HUMAN (Q9H477), RBSK_LACLA (Q9CF42), RBSK_LEIMA (E9AD19), RBSK_MOUSE (Q8R1Q9), RBSK_SCHPO (O60116), RBSK_YEAST (P25332), SCKL2_ARATH (F4I0K2), SCRKL_DICDI (Q54D80), SCRK_RHILT (P42720), SQUV_ECOLI (P32143), TAGK_AGRFC (A9CES5), TAGK_BACLD (Q65EY9), TAGK_KLEOX (Q8VS15), Y356_ARCFU (O29891), YZ37_SYNY3 (Q55480)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
SCRK_SALTH (P24261) |
| UniProtKB/Swiss-Prot False positive sequences |
18 sequences
ACOX3_ARATH (P0CZ23), AHL13_ARATH (Q940I0), DAB2_HUMAN (P98082), DAPA1_CLOAB (Q97GI9), DAPA1_HALH5 (Q9KC32), DAPA_SYMTH (Q67P59), DDROC_DEIDV (C1CYP4), GRLL_DICDI (Q54U89), IDI2_LACLA (Q9CIF5), LIS1_PICGU (A5DJX5), REC2_ARATH (F4JKH6), RHAB_LACPL (Q88S49), RHAB_LIGS1 (Q1WRE4), SOCB_CAUVN (A0A0H3CC30), SYYM_NEUCR (P12063), THM1_THADA (P02883), THM2_THADA (P02884), Y1806_DICDI (Q55AN8)» more |
| PDB [Detailed view] |
40 PDB
pdb_00002awd; pdb_00002c49; pdb_00002c4e; pdb_00002f02; pdb_00002jg1; pdb_00002jgv; pdb_00002pkf; pdb_00002pkk; pdb_00002pkm; pdb_00002pkn; pdb_00002q5r; pdb_00003cqd; pdb_00003ewm; pdb_00003gbu; pdb_00003h49; pdb_00003ih0; pdb_00003in1; pdb_00003n1c; pdb_00003umo; pdb_00003ump; pdb_00003uqd; pdb_00003uqe; pdb_00004o1g; pdb_00004pvv; pdb_00004ube; pdb_00006c67; pdb_00006c9n; pdb_00006c9p; pdb_00006c9q; pdb_00006c9r; pdb_00006c9s; pdb_00006c9v; pdb_00007c1x; pdb_00007c1y; pdb_00007c1z; pdb_00007vtd; pdb_00007vte; pdb_00007vtf; pdb_00007vtg; pdb_00007vva » more |