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We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

PROSITE entry PS00900


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PURL: https://purl.expasy.org/prosite/signature/PS00900

Direct ScanProsite submission
General information about the entry

Entry name [info] RNA_POL_PHAGE_1
Accession [info] PS00900
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-OCT-1993 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00410
Associated ProRule [info] PRU10031

Name and characterization of the entry

Description [info] Bacteriophage-type RNA polymerase family active site signature 1.
Pattern [info]
P-[LIVM]-x(2)-D-[GA]-[ST]-[AC]-[SN]-[GA]-[LIVMFY]-Q.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 27 in 27 different sequences
Number of true positive hits 27 in 27 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Bacteriophages, Eukaryotes
Maximum number of repetitions [info] 1
Site [info] active_site at position 4
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
27 sequences

RPO1B_TOBAC (Q8L6J5), RPO2A_TOBAC (Q8L6J2), RPO2B_TOBAC (Q8L6J3), 
RPO3A_TOBAC (P69243), RPO3B_TOBAC (Q8L6J1), RPOL_BPK11  (P18147), 
RPOL_BPSP6  (P06221), RPOL_BPT3   (P07659), RPOL_BPT7   (P00573), 
RPOM_HUMAN  (O00411), RPOM_MOUSE  (Q8BKF1), RPOM_NEUCR  (P38671), 
RPOM_SCHPO  (O13993), RPOM_YEAST  (P13433), RPOP_AGABT  (P33539), 
RPOP_CLAPU  (P22372), RPOP_GELSP  (O03685), RPOP_MAIZE  (P10581), 
RPOP_NEUCS  (P33540), RPOP_NEUIN  (P33541), RPOP_PODAS  (Q01521), 
RPOT1_ARATH (P92969), RPOT1_NICSY (Q93Y94), RPOT2_ARATH (Q9LFV6), 
RPOT2_NICSY (Q8VWF8), RPOT3_ARATH (O24600), RPOT3_NICSY (P69242)
» more

PDB
[Detailed view]
41 PDB

pdb_00001aro; pdb_00001cez; pdb_00001h38; pdb_00001msw; pdb_00001qln; pdb_00001s0v; pdb_00001s76; pdb_00001s77; pdb_00002pi4; pdb_00002pi5; pdb_00003e2e; pdb_00003e3j; pdb_00003spa; pdb_00004boc; pdb_00004rnp; pdb_00005ola; pdb_00006erp; pdb_00006erq; pdb_00006ymv; pdb_00006ymw; pdb_00007a8p; pdb_00007pzp; pdb_00007pzr; pdb_00007zc4; pdb_00008ap1; pdb_00008att; pdb_00008atv; pdb_00008atw; pdb_00008c5s; pdb_00008c5u; pdb_00008dh0; pdb_00008dh1; pdb_00008dh2; pdb_00008dh3; pdb_00008dh4; pdb_00008dh5; pdb_00008q63; pdb_00008u8u; pdb_00008u8v; pdb_00009bdc; pdb_00009bdd
» more