PROSITE logo
Black ribbon
We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

PROSITE entry PS00993


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS00993

Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_L30E_2
Accession [info] PS00993
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00588

Name and characterization of the entry

Description [info] Ribosomal protein L30e signature 2.
Pattern [info] 
[DE]-[LM]-G-[STALPD]-x(2)-[GK]-[KR]-x(6)-[LIVM]-x-[LIVM]-x-[DEN]-x-[GI].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 63 in 63 different sequences
Number of true positive hits 61 in 61 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 4
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.83 %
Recall (true positives / (true positives + false negatives)) 93.85 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 61 sequences 

RL301_ARATH (Q9C8F7), RL302_ARATH (Q8VZ19), RL303_ARATH (Q9LSA3), 

RL30A_SCHPO (P52808), RL30B_SCHPO (Q9UTP0), RL30E_AERPE (Q9YAU3), 
RL30E_ARCFU (O28389), RL30E_METAC (Q8TRB9), RL30E_METJA (P54061), 
RL30E_METKA (Q8TXJ0), RL30E_METM5 (A4FWF4), RL30E_METM6 (A9A9U8), 
RL30E_METM7 (A6VGV1), RL30E_METMA (Q8PUR3), RL30E_METMP (Q6LXI6), 
RL30E_METS3 (A5ULN4), RL30E_METST (Q2NEK6), RL30E_METTH (O27127), 
RL30E_METTP (A0B560), RL30E_METVS (P14025), RL30E_PYRAB (Q9V112), 
RL30E_PYRAE (Q8ZYQ6), RL30E_PYRCJ (A3MXZ2), RL30E_PYRFU (Q8U0M6), 
RL30E_PYRHO (O74018), RL30E_PYRIL (A1RSE6), RL30E_PYRNV (B1YC27), 
RL30E_SACS2 (Q980R3), RL30E_SULAC (P11522), RL30E_SULTO (P58376), 
RL30E_THECE (P29160), RL30E_THEGJ (C5A206), RL30E_THEKO (Q5JE35), 
RL30E_THESM (C6A1G2), RL30_BOVIN  (Q3T0D5), RL30_BRABE  (P58374), 
RL30_CANAL  (A0A1D8PM75), RL30_CANGA  (Q6FXZ0), RL30_CHICK  (P67883), 
RL30_DICDI  (Q55BS9), RL30_EREGS  (Q752U5), RL30_EUPES  (Q9M5M6), 
RL30_HUMAN  (P62888), RL30_ICTPU  (P58372), RL30_KLULA  (P38664), 
RL30_LEIMA  (P39095), RL30_LUPLU  (O49884), RL30_MACFA  (Q76KA2), 
RL30_MAIZE  (O48558), RL30_MOUSE  (P62889), RL30_NEUCR  (Q7S7F1), 
RL30_OPHHA  (P67884), RL30_ORYSJ  (Q9SDG6), RL30_RABIT  (G1TDL2), 
RL30_RAT(P62890), RL30_SPOFR  (P58375), RL30_TETTS  (P0DJ59), 
RL30_TRYBB  (P49153), RL30_WHEAT  (Q5I7K9), RL30_YARLI  (Q6C4U7), 
RL30_YEAST  (P14120)
» more

UniProtKB/Swiss-Prot
False negative sequences		 4 sequences 

RL30E_CALMQ (A8MB78), RL30E_METB6 (A7I9N4), RL30E_METHJ (Q2FPJ8), 

RL30E_METPE (B8GDW0)
» more

UniProtKB/Swiss-Prot
False positive sequences		 2 sequences 

MARC2_MOUSE (Q922Q1), MARC2_RAT   (O88994)


				
	

	

		PDB
[Detailed view]		
		
			445 PDB
			


			pdb_00001ck2; pdb_00001cn7; pdb_00001go0; pdb_00001go1; pdb_00001h7m; pdb_00001nmu; pdb_00001t0k; pdb_00001w3e; pdb_00001w40; pdb_00001w41; pdb_00001w42; pdb_00001ysh; 
			
				pdb_00002bo1; pdb_00003cpq; pdb_00003j6x; pdb_00003j6y; pdb_00003j77; pdb_00003j78; pdb_00003jct; pdb_00003lfo; pdb_00003n4y; pdb_00003n4z; pdb_00003ra5; pdb_00003ra6; 
				pdb_00003vi6; pdb_00004adx; pdb_00004u3m; pdb_00004u3n; pdb_00004u3u; pdb_00004u4n; pdb_00004u4o; pdb_00004u4q; pdb_00004u4r; pdb_00004u4u; pdb_00004u4y; pdb_00004u4z; 
				pdb_00004u50; pdb_00004u51; pdb_00004u52; pdb_00004u53; pdb_00004u55; pdb_00004u56; pdb_00004u6f; pdb_00004ug0; pdb_00004v3p; pdb_00004v4n; pdb_00004v5z; pdb_00004v6i; 
				pdb_00004v6u; pdb_00004v6x; pdb_00004v7e; pdb_00004v7f; pdb_00004v7r; pdb_00004v88; pdb_00004v8p; pdb_00004v8t; pdb_00004v8y; pdb_00004v8z; pdb_00004v91; pdb_00005aj0; 
				pdb_00005apn; pdb_00005apo; pdb_00005dat; pdb_00005dc3; pdb_00005dge; pdb_00005dgf; pdb_00005dgv; pdb_00005fci; pdb_00005fcj; pdb_00005gak; pdb_00005h4p; pdb_00005i4l; 
				pdb_00005it7; pdb_00005jcs; pdb_00005juo; pdb_00005jup; pdb_00005jus; pdb_00005jut; pdb_00005juu; pdb_00005lks; pdb_00005lyb; pdb_00005lzs; pdb_00005lzt; pdb_00005lzu; 
				pdb_00005lzv; pdb_00005lzw; pdb_00005lzx; pdb_00005lzy; pdb_00005lzz; pdb_00005m1j; pdb_00005mc6; pdb_00005mei; pdb_00005ndg; pdb_00005ndv; pdb_00005ndw; pdb_00005obm; 
				pdb_00005on6; pdb_00005t2c; pdb_00005t62; pdb_00005t6r; pdb_00005tbw; pdb_00005tga; pdb_00005tgm; pdb_00006cb1; pdb_00006d90; pdb_00006d9j; pdb_00006elz; pdb_00006em5; 
				pdb_00006ft6; pdb_00006gq1; pdb_00006gqb; pdb_00006gqv; pdb_00006hcf; pdb_00006hcj; pdb_00006hcm; pdb_00006hcq; pdb_00006hd7; pdb_00006hhq; pdb_00006i7o; pdb_00006ip5; 
				pdb_00006ip6; pdb_00006ip8; pdb_00006lqm; pdb_00006lsr; pdb_00006lss; pdb_00006lu8; pdb_00006m62; pdb_00006mtb; pdb_00006mtc; pdb_00006mtd; pdb_00006mte; pdb_00006n8j; 
				pdb_00006n8k; pdb_00006n8l; pdb_00006n8m; pdb_00006n8n; pdb_00006n8o; pdb_00006oig; pdb_00006ole; pdb_00006olf; pdb_00006olg; pdb_00006oli; pdb_00006olz; pdb_00006om0; 
				pdb_00006om7; pdb_00006p5i; pdb_00006p5j; pdb_00006p5k; pdb_00006p5n; pdb_00006q8y; pdb_00006qik; pdb_00006qt0; pdb_00006qtz; pdb_00006qzp; pdb_00006r5q; pdb_00006r6g; 
				pdb_00006r7q; pdb_00006r84; pdb_00006r86; pdb_00006r87; pdb_00006ri5; pdb_00006rzz; pdb_00006s05; pdb_00006s47; pdb_00006sgc; pdb_00006skf; pdb_00006skg; pdb_00006snt; 
				pdb_00006sv4; pdb_00006swa; pdb_00006t4q; pdb_00006t59; pdb_00006t7i; pdb_00006t7t; pdb_00006t83; pdb_00006tb3; pdb_00006th6; pdb_00006tnu; pdb_00006uz7; pdb_00006w6l; 
				pdb_00006woo; pdb_00006xa1; pdb_00006xiq; pdb_00006xir; pdb_00006y0g; pdb_00006y2l; pdb_00006y57; pdb_00006y6x; pdb_00006ylg; pdb_00006ylh; pdb_00006ylx; pdb_00006yly; 
				pdb_00006z6j; pdb_00006z6k; pdb_00006z6l; pdb_00006z6m; pdb_00006z6n; pdb_00006zm7; pdb_00006zme; pdb_00006zmi; pdb_00006zmo; pdb_00006zvk; pdb_00007a01; pdb_00007b7d; 
				pdb_00007bhp; pdb_00007bt6; pdb_00007btb; pdb_00007cpu; pdb_00007cpv; pdb_00007f5s; pdb_00007ls1; pdb_00007ls2; pdb_00007mdz; pdb_00007mpi; pdb_00007mpj; pdb_00007n8b; 
				pdb_00007nac; pdb_00007nad; pdb_00007nrc; pdb_00007nrd; pdb_00007nwg; pdb_00007nwh; pdb_00007nwi; pdb_00007o7y; pdb_00007o7z; pdb_00007o80; pdb_00007o81; pdb_00007obr; 
				pdb_00007of1; pdb_00007oh3; pdb_00007ohq; pdb_00007ohr; pdb_00007ow7; pdb_00007oyd; pdb_00007pzy; pdb_00007q08; pdb_00007q0f; pdb_00007q0p; pdb_00007q0r; pdb_00007qgg; 
				pdb_00007qvp; pdb_00007qwq; pdb_00007qwr; pdb_00007qws; pdb_00007r72; pdb_00007r7a; pdb_00007r81; pdb_00007rr5; pdb_00007tm3; pdb_00007too; pdb_00007top; pdb_00007tor; 
				pdb_00007tut; pdb_00007u0h; pdb_00007ucj; pdb_00007uck; pdb_00007ug6; pdb_00007uoo; pdb_00007uqb; pdb_00007uqz; pdb_00007v08; pdb_00007xnx; pdb_00007xny; pdb_00007z34; 
				pdb_00007zjw; pdb_00007zjx; pdb_00007zpq; pdb_00007zrs; pdb_00007zs5; pdb_00007zuw; pdb_00007zux; pdb_00007zw0; pdb_00008a3d; pdb_00008aaf; pdb_00008agt; pdb_00008agu; 
				pdb_00008agv; pdb_00008agw; pdb_00008agx; pdb_00008agz; pdb_00008b5l; pdb_00008b6c; pdb_00008bhf; pdb_00008bip; pdb_00008bjq; pdb_00008bn3; pdb_00008bpo; pdb_00008bqd; 
				pdb_00008bqx; pdb_00008btk; pdb_00008c3a; pdb_00008ccs; pdb_00008cdl; pdb_00008cdr; pdb_00008ceh; pdb_00008cf5; pdb_00008cg8; pdb_00008cgn; pdb_00008civ; pdb_00008cku; 
				pdb_00008cmj; pdb_00008cq7; pdb_00008cqw; pdb_00008cre; pdb_00008esq; pdb_00008esr; pdb_00008etc; pdb_00008etg; pdb_00008eub; pdb_00008eug; pdb_00008eui; pdb_00008evp; 
				pdb_00008evq; pdb_00008evr; pdb_00008evs; pdb_00008evt; pdb_00008ewb; pdb_00008ewc; pdb_00008fky; pdb_00008fkz; pdb_00008fl2; pdb_00008fl3; pdb_00008fl4; pdb_00008fl6; 
				pdb_00008fl7; pdb_00008fl9; pdb_00008fla; pdb_00008flb; pdb_00008flc; pdb_00008fld; pdb_00008fle; pdb_00008flf; pdb_00008g5y; pdb_00008g5z; pdb_00008g60; pdb_00008g61; 
				pdb_00008g6j; pdb_00008glp; pdb_00008hfr; pdb_00008hku; pdb_00008hkv; pdb_00008hky; pdb_00008hkz; pdb_00008hl1; pdb_00008hl2; pdb_00008hl3; pdb_00008hl4; pdb_00008hl5; 
				pdb_00008idt; pdb_00008idy; pdb_00008ie3; pdb_00008ifd; pdb_00008ife; pdb_00008ine; pdb_00008inf; pdb_00008ink; pdb_00008ip8; pdb_00008ipa; pdb_00008ipb; pdb_00008ipd; 
				pdb_00008ipx; pdb_00008ipy; pdb_00008ir1; pdb_00008ir3; pdb_00008jdj; pdb_00008jdk; pdb_00008jdl; pdb_00008jdm; pdb_00008jiv; pdb_00008k2c; pdb_00008k2d; pdb_00008k82; 
				pdb_00008oeq; pdb_00008ogj; pdb_00008oh6; pdb_00008ohd; pdb_00008oi5; pdb_00008oj0; pdb_00008oj3; pdb_00008oj5; pdb_00008oj8; pdb_00008ova; pdb_00008ove; pdb_00008p2k; 
				pdb_00008p4v; pdb_00008p8m; pdb_00008p8n; pdb_00008p8u; pdb_00008p9a; pdb_00008pfr; pdb_00008q5i; pdb_00008q7z; pdb_00008q87; pdb_00008qfd; pdb_00008qoi; pdb_00008qyx; 
				pdb_00008rjb; pdb_00008rjc; pdb_00008rjd; pdb_00008rl2; pdb_00008scb; pdb_00008t2x; pdb_00008t2y; pdb_00008t2z; pdb_00008t30; pdb_00008t3a; pdb_00008t3b; pdb_00008t3c; 
				pdb_00008t3d; pdb_00008t3e; pdb_00008t3f; pdb_00008ukb; pdb_00008ut0; pdb_00008uti; pdb_00008v87; pdb_00008vft; pdb_00008xsx; pdb_00008xsy; pdb_00008xsz; pdb_00008xu8; 
				pdb_00008y0u; pdb_00008y0w; pdb_00008y0x; pdb_00008yld; pdb_00008ylr; pdb_00008yoo; pdb_00008yop; pdb_00008z70; pdb_00008z71; pdb_00009axt; pdb_00009axu; pdb_00009axv; 
				pdb_00009bdl; pdb_00009bdn; pdb_00009bdp; pdb_00009c3h; pdb_00009e6q; pdb_00009e71; pdb_00009e7f; pdb_00009f1b; pdb_00009f1c; pdb_00009f1d; pdb_00009f9s; pdb_00009g8m; 
				pdb_00009gmo
			
			

			» more