PROSITE documentation PDOC00588 [for PROSITE entry PS00993]
Ribosomal protein L30e signatures
A number of eukaryotic and archaebacterial ribosomal proteins can be grouped
on the basis of sequence similarities. One of these families consists of:
Mammalian L30 [
Leishmania major L30.
Yeast YL32 [
Bacillus subtilis hypothetical protein ybxF.
Thermococcus celer L30 [
A probable ribosomal protein (ORF 1) from Methanococcus vannielii [
A probable ribosomal protein (ORF 104) from Sulfolobus acidocaldarius [
These proteins have 82 to 114 amino-acid residues. As signature patterns, we
selected two conserved regions; one located in the N-terminal region, the
other in the C-terminal.
April 2006 / Pattern revised.
PROSITE methods (with tools and information) covered by this documentation:
PS00993; Ribosomal protein L30e signature 2 (PATTERN)
PS00709; Ribosomal protein L30e signature 1 (PATTERN)
1 Authors Nakanishi O., Oyanagi M., Kuwano Y., Tanaka T., Nakayama T., Mitsui H., Nabeshima Y., Ogata K.
Title Molecular cloning and nucleotide sequences of cDNAs specific for rat liver ribosomal proteins S17 and L30.
Source Gene 35:289-296(1985).
PubMed ID 3840111
2 Authors Dabeva M.D., Warner J.R.
Title The yeast ribosomal protein L32 and its gene.
Source J. Biol. Chem. 262:16055-16059(1987).
PubMed ID 3316213
3 Authors Klenk H.-P., Schwass V., Zillig W.
Title Nucleotide sequence of the genes encoding the L30, S12 and S7 equivalent ribosomal proteins from the archaeum Thermococcus celer.
Source Nucleic Acids Res. 19:6047-6047(1991).
PubMed ID 1840672
4 Authors Lechner K., Heller G., Boeck A.
Title Organization and nucleotide sequence of a transcriptional unit of Methanococcus vannielii comprising genes for protein synthesis elongation factors and ribosomal proteins.
Source J. Mol. Evol. 29:20-27(1989).
PubMed ID 2475640
5 Authors Puehler G., Lottspeich F., Zillig W.
Source Nucleic Acids Res. 17:4517-4534(1989).
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