We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
PROSITE documentation PDOC00588Ribosomal protein L30e signatures
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PURL: https://purl.expasy.org/prosite/documentation/PDOC00588
Description
A number of eukaryotic and archaebacterial ribosomal proteins can be grouped on the basis of sequence similarities. One of these families consists of:
- Mammalian L30 [1].
- Leishmania major L30.
- Yeast YL32 [2].
- Bacillus subtilis hypothetical protein ybxF.
- Thermococcus celer L30 [3].
- A probable ribosomal protein (ORF 1) from Methanococcus vannielii [4].
- A probable ribosomal protein (ORF 104) from Sulfolobus acidocaldarius [5].
These proteins have 82 to 114 amino-acid residues. As signature patterns, we selected two conserved regions; one located in the N-terminal region, the other in the C-terminal.
Last update:April 2006 / Pattern revised.
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Technical section
PROSITE methods (with tools and information) covered by this documentation:
References
| 1 | Authors | Nakanishi O. Oyanagi M. Kuwano Y. Tanaka T. Nakayama T. Mitsui H. Nabeshima Y. Ogata K. |
| Title | Molecular cloning and nucleotide sequences of cDNAs specific for rat liver ribosomal proteins S17 and L30. | |
| Source | Gene 35:289-296(1985). | |
| PubMed ID | 3840111 |
| 2 | Authors | Dabeva M.D. Warner J.R. |
| Title | The yeast ribosomal protein L32 and its gene. | |
| Source | J. Biol. Chem. 262:16055-16059(1987). | |
| PubMed ID | 3316213 |
| 3 | Authors | Klenk H.-P. Schwass V. Zillig W. |
| Title | Nucleotide sequence of the genes encoding the L30, S12 and S7 equivalent ribosomal proteins from the archaeum Thermococcus celer. | |
| Source | Nucleic Acids Res. 19:6047-6047(1991). | |
| PubMed ID | 1840672 |
| 4 | Authors | Lechner K. Heller G. Boeck A. |
| Title | Organization and nucleotide sequence of a transcriptional unit of Methanococcus vannielii comprising genes for protein synthesis elongation factors and ribosomal proteins. | |
| Source | J. Mol. Evol. 29:20-27(1989). | |
| PubMed ID | 2475640 |
| 5 | Authors | Puehler G. Lottspeich F. Zillig W. |
| Source | Nucleic Acids Res. 17:4517-4534(1989). |
Copyright
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