PROSITE documentation PDOC00588Ribosomal protein L30e signatures
Description
A number of eukaryotic and archaebacterial ribosomal proteins can be grouped on the basis of sequence similarities. One of these families consists of:
- Mammalian L30 [1].
- Leishmania major L30.
- Yeast YL32 [2].
- Bacillus subtilis hypothetical protein ybxF.
- Thermococcus celer L30 [3].
- A probable ribosomal protein (ORF 1) from Methanococcus vannielii [4].
- A probable ribosomal protein (ORF 104) from Sulfolobus acidocaldarius [5].
These proteins have 82 to 114 amino-acid residues. As signature patterns, we selected two conserved regions; one located in the N-terminal region, the other in the C-terminal.
Last update:April 2006 / Pattern revised.
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Technical section
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References
1 | Authors | Nakanishi O. Oyanagi M. Kuwano Y. Tanaka T. Nakayama T. Mitsui H. Nabeshima Y. Ogata K. |
Title | Molecular cloning and nucleotide sequences of cDNAs specific for rat liver ribosomal proteins S17 and L30. | |
Source | Gene 35:289-296(1985). | |
PubMed ID | 3840111 |
2 | Authors | Dabeva M.D. Warner J.R. |
Title | The yeast ribosomal protein L32 and its gene. | |
Source | J. Biol. Chem. 262:16055-16059(1987). | |
PubMed ID | 3316213 |
3 | Authors | Klenk H.-P. Schwass V. Zillig W. |
Title | Nucleotide sequence of the genes encoding the L30, S12 and S7 equivalent ribosomal proteins from the archaeum Thermococcus celer. | |
Source | Nucleic Acids Res. 19:6047-6047(1991). | |
PubMed ID | 1840672 |
4 | Authors | Lechner K. Heller G. Boeck A. |
Title | Organization and nucleotide sequence of a transcriptional unit of Methanococcus vannielii comprising genes for protein synthesis elongation factors and ribosomal proteins. | |
Source | J. Mol. Evol. 29:20-27(1989). | |
PubMed ID | 2475640 |
5 | Authors | Puehler G. Lottspeich F. Zillig W. |
Source | Nucleic Acids Res. 17:4517-4534(1989). |
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