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PROSITE entry PS01111


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General information about the entry

Entry name [info] RNA_POL_K_14KD
Accession [info] PS01111
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED;
01-NOV-1997 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00855

Name and characterization of the entry

Description [info] RNA polymerases K / 14 to 18 Kd subunits signature.
Pattern [info] 
[ST]-x-[FY]-E-x-[AT]-R-x-[LIVM]-[GSA]-x-R-[SA]-x-Q.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.


Total number of hits 48 in 48 different sequences
Number of true positive hits 48 in 48 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.96 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 48 sequences 

RPAB2_BOVIN (Q32PE0), RPAB2_CAEBR (A8WSV7), RPAB2_CAEEL (Q17684), 

RPAB2_CRIGR (P61217), RPAB2_DICDI (Q54FA8), RPAB2_DROME (Q24320), 
RPAB2_HUMAN (P61218), RPAB2_MOUSE (P61219), RPAB2_PONAB (Q5R592), 
RPAB2_RAT   (O88828), RPAB2_SCHPO (P36595), RPAB2_YEAST (P20435), 
RPB6B_ARATH (Q9SJ96), RPB6_ASFB7  (P42484), RPB6_ASFK5  (P0C9D9), 
RPB6_ASFM2  (P0C9D6), RPB6_ASFP4  (P0C9D7), RPB6_ASFWA  (P0C9D8), 
RPD6A_ARATH (Q9FJ98), RPO6_AERPE  (Q9YDJ9), RPO6_ARCFU  (O29134), 
RPO6_HALMA  (P29200), RPO6_HALS3  (B0R4Y7), RPO6_HALSA  (Q9HQJ0), 
RPO6_METAC  (Q8TT40), RPO6_METJA  (Q57650), RPO6_METLZ  (A2SSV2), 
RPO6_METMA  (Q8PW42), RPO6_METTH  (O26148), RPO6_METTP  (A0B6E6), 
RPO6_PICTO  (Q6L1M4), RPO6_PYRAB  (P62014), RPO6_PYRAE  (Q8ZTF9), 
RPO6_PYRFU  (Q8U0E8), RPO6_PYRHO  (P62015), RPO6_SACS2  (Q97ZJ9), 
RPO6_SACSH  (B8YB61), RPO6_SULAC  (P39463), RPO6_SULIA  (C3N5H2), 
RPO6_SULIK  (C4KH38), RPO6_SULIM  (C3MUV8), RPO6_SULTO  (Q972B1), 
RPO6_THEAC  (Q9HJ14), RPO6_THEGJ  (C5A244), RPO6_THEKO  (Q5JJD0), 
RPO6_THEON  (B6YSQ8), RPO6_THEPD  (A1RWX0), RPO6_THEVO  (P58232)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

RPO6_HALLT  (B9LPW5)


				
	

	

		PDB
[Detailed view]		
		
			322 PDB
			


			1I3Q; 1I50; 1I6H; 1K83; 1NIK; 1NT9; 1PQV; 1QKL; 1R5U; 1R9S; 1R9T; 1SFO; 
			
				1TWA; 1TWC; 1TWF; 1TWG; 1TWH; 1WCM; 1Y1V; 1Y1W; 1Y1Y; 1Y77; 2B63; 2B8K; 
				2E2H; 2E2I; 2E2J; 2JA5; 2JA6; 2JA7; 2JA8; 2NVQ; 2NVT; 2NVX; 2NVY; 2NVZ; 
				2PMZ; 2R7Z; 2R92; 2R93; 2VUM; 2WAQ; 2WB1; 2Y0S; 2YU9; 3CQZ; 3FKI; 3GTG; 
				3GTJ; 3GTK; 3GTL; 3GTM; 3GTO; 3GTP; 3GTQ; 3H0G; 3H3V; 3HKZ; 3HOU; 3HOV; 
				3HOW; 3HOX; 3HOY; 3HOZ; 3I4M; 3I4N; 3J0K; 3J1N; 3K1F; 3K7A; 3M3Y; 3M4O; 
				3PO2; 3PO3; 3QT1; 3RZD; 3RZO; 3S14; 3S15; 3S16; 3S17; 3S1M; 3S1N; 3S1Q; 
				3S1R; 3S2D; 3S2H; 4A3B; 4A3C; 4A3D; 4A3E; 4A3F; 4A3G; 4A3I; 4A3J; 4A3K; 
				4A3L; 4A3M; 4A93; 4AYB; 4BBR; 4BBS; 4BXX; 4BXZ; 4BY1; 4BY7; 4C2M; 4C3H; 
				4C3I; 4C3J; 4QIW; 4V1M; 4V1N; 4V1O; 4V8S; 4X67; 4X6A; 4Y52; 4Y7N; 4YM7; 
				5C3E; 5C44; 5C4A; 5C4J; 5C4X; 5FJ8; 5FJ9; 5FJA; 5FLM; 5FMF; 5FYW; 5FZ5; 
				5G5L; 5IP7; 5IP9; 5IY6; 5IY7; 5IY8; 5IY9; 5IYA; 5IYB; 5IYC; 5IYD; 5LMX; 
				5M3F; 5M3M; 5M5W; 5M5X; 5M5Y; 5M64; 5N5Y; 5N5Z; 5N60; 5N61; 5OA1; 5OIK; 
				5OQJ; 5OQM; 5OT2; 5SVA; 5U0S; 5U5Q; 5VVR; 5VVS; 5W4U; 5W51; 5W5Y; 5W64; 
				5W65; 5W66; 6BLO; 6BLP; 6BM2; 6BM4; 6BQF; 6CNB; 6CNC; 6CND; 6CNF; 6DRD; 
				6EU0; 6EU1; 6EU2; 6EU3; 6F40; 6F41; 6F42; 6F44; 6GYK; 6GYL; 6GYM; 6H67; 
				6H68; 6HKO; 6HLQ; 6HLR; 6HLS; 6I84; 6KF3; 6KF4; 6KF9; 6O6C; 6O9L; 6RQH; 
				6RQL; 6RQT; 6RRD; 6RUI; 6RUO; 6RWE; 6TPS; 6TUT; 6UPX; 6UPY; 6UPZ; 6UQ0; 
				6UQ1; 6UQ2; 6UQ3; 6XRE; 7A6H; 7AE1; 7AE3; 7AEA; 7AOC; 7AOD; 7AOE; 7AST; 
				7D58; 7D59; 7DN3; 7DTH; 7DTI; 7DU2; 7EU0; 7EU1; 7FJI; 7FJJ; 7KED; 7KEE; 
				7KEF; 7LBM; 7MEI; 7MK9; 7MKA; 7ML0; 7ML1; 7ML2; 7ML4; 7NKX; 7NKY; 7O4I; 
				7O4J; 7O4K; 7O4L; 7O72; 7O73; 7O75; 7OB9; 7OBA; 7OBB; 7OK0; 7OQ4; 7OQY; 
				7RIM; 7RIP; 7RIQ; 7RIW; 7RIX; 7RIY; 7UI9; 7UIF; 7UIO; 7VBA; 7VBB; 7VBC; 
				7Z0H; 7Z1L; 7Z1M; 7Z1N; 7Z1O; 7Z2Z; 7Z30; 7Z31; 7ZS9; 7ZSA; 7ZSB; 8A43; 
				8BWS; 8CEN; 8CEO; 8CRO; 8HYJ; 8ITY; 8IUE; 8IUH; 8JCH; 8K5P; 8OKI; 8ORQ; 
				8P2I; 8Q3B; 8Q3K; 8RBO; 8TUG; 8TVP; 8TVQ; 8TVS; 8TVV; 8TVW; 8TVX; 8TVY; 
				8UKQ; 8UKR; 8UKS; 8UKT; 8UKU; 8XMB; 8XMC; 8XMD; 8XME; 9JA1
			
			

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