PROSITE entry PS01295
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry
Entry name [info] | ISPD |
Accession [info] | PS01295 |
Entry type [info] | PATTERN |
Date [info] |
01-NOV-1997 CREATED;
01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00997 |
Name and characterization of the entry
Description [info] | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. |
Pattern [info] |
[IVT]-[LIVMC]-[IVT]-[HS]-D-[SGAV]-[AV]-R. |
Numerical results [info]
Total number of hits | 455 in 455 different sequences |
Number of true positive hits | 448 in 448 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 7 in 7 different sequences |
Number of false negative sequences | 57 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 98.46 % |
Recall (true positives / (true positives + false negatives)) | 88.71 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
448 sequences
F6PCT_CAMJU (A0A0Q3NN41), ISPDF_AGRFC (Q8UFF4), ISPDF_ALBFT (Q21YT7), ISPDF_ALLAM (B9JW91), ISPDF_ANADE (Q2IQG8), ISPDF_ANADF (A7HDA2), ISPDF_BRADU (Q89LQ8), ISPDF_BRASB (A5EIY9), ISPDF_BRASO (A4YUQ7), ISPDF_BRUA2 (Q2YPW1), ISPDF_BRUA4 (A6X0N1), ISPDF_BRUAB (Q57D18), ISPDF_BRUME (Q8YHD8), ISPDF_BRUO2 (A5VQP4), ISPDF_BRUSU (Q8G0H4), ISPDF_CAMJ8 (A8FNR8), ISPDF_CAMJD (A7H5V8), ISPDF_CAMJE (Q9PM68), ISPDF_CAMJJ (A1W1K9), ISPDF_CAMJR (Q5HSI4), ISPDF_CAMLR (B9KEX3), ISPDF_CAUVC (Q9A7I5), ISPDF_CAUVN (B8GW85), ISPDF_CHESB (Q11HV9), ISPDF_CLAM3 (A5CTY4), ISPDF_DESAP (B1I0S9), ISPDF_DESPS (Q6ARN9), ISPDF_DINSH (A8LKV5), ISPDF_ERYLH (Q2NAE1), ISPDF_GLUOX (Q5FQD6), ISPDF_GRABC (Q0BTD5), ISPDF_HELAH (Q17WU1), ISPDF_HELHP (Q7VFU3), ISPDF_HELP2 (B6JL03), ISPDF_HELPG (B5Z6H4), ISPDF_HELPH (Q1CU78), ISPDF_HELPJ (Q9ZM19), ISPDF_HELPS (B2USR1), ISPDF_HELPY (O25664), ISPDF_HYPNA (Q0C0N0), ISPDF_JANSC (Q28Q60), ISPDF_LAWIP (Q1MR76), ISPDF_LEIXX (Q6ADI0), ISPDF_MARMM (Q0APQ6), ISPDF_NITHX (Q1QM99), ISPDF_NITV2 (Q72C30), ISPDF_NITV4 (A1VDX6), ISPDF_NITWN (Q3SSN8), ISPDF_NOVAD (Q2G708), ISPDF_OLEA2 (Q310X3), ISPDF_PARDP (A1B890), ISPDF_PARL1 (A7HXV6), ISPDF_PARM1 (Q2W4Q8), ISPDF_PELUB (Q4FM31), ISPDF_RHIE6 (B3PYS4), ISPDF_RHIEC (Q2K8V5), ISPDF_RHIJ3 (Q1MH21), ISPDF_RHILO (Q98MX9), ISPDF_RHILW (B5ZNB6), ISPDF_RHIME (Q92Q90), ISPDF_RHIR8 (B9JF01), ISPDF_RHIWR (A5V2U9), ISPDF_RHOCB (Q08113), ISPDF_RHOP2 (Q2IW23), ISPDF_RHOP5 (Q07MZ2), ISPDF_RHOPA (Q6N6M5), ISPDF_RHOPB (Q214R1), ISPDF_RHOPS (Q137C3), ISPDF_RHOPT (B3QIL5), ISPDF_RHORT (Q2RTS1), ISPDF_RUEPO (Q5LRN5), ISPDF_RUEST (Q1GGW9), ISPDF_SINMW (A6U8F8), ISPDF_SOLM1 (C4XSW4), ISPDF_SPHAL (Q1GTN0), ISPDF_SULDN (Q30QG7), ISPDF_TREPA (O83525), ISPDF_WOLSU (Q7MQW9), ISPDF_ZYMMO (Q9RNZ1), ISPD_ACAM1 (B0C9F6), ISPD_ACIAD (Q6FAU1), ISPD_ACIBC (B2I2A2), ISPD_ACIBS (B0VQH8), ISPD_ACIBT (A3M5X8), ISPD_ACIBY (B0V5E6), ISPD_ACIC5 (C1F763), ISPD_ACIF2 (B7J4C0), ISPD_ACIF5 (B5EMB5), ISPD_ACTP2 (A3N0G2), ISPD_ACTP7 (B3H1E1), ISPD_ACTPJ (B0BP82), ISPD_ACTSZ (A6VQY1), ISPD_AERHH (A0KGH5), ISPD_ALIF1 (Q5E328), ISPD_ALIFM (B5FAF7), ISPD_ALISL (B6EKL6), ISPD_ALKMQ (A6TWL0), ISPD_ALKOO (A8MLB1), ISPD_AQUAE (O67343), ISPD_ARATH (P69834), ISPD_AROAE (Q5NYJ9), ISPD_AZOSB (A1K644), ISPD_BACAH (A0R8F7), ISPD_BACAN (Q81VV5), ISPD_BACC1 (Q73FC1), ISPD_BACCN (A7GJZ7), ISPD_BACCR (Q81J63), ISPD_BACCZ (Q63HB4), ISPD_BACHK (Q6HPT2), ISPD_BACLD (Q65PD2), ISPD_BACMK (A9VN98), ISPD_BACP2 (A8F958), ISPD_BACSU (Q06755), ISPD_BACVZ (A7Z0L2), ISPD_BAUCH (Q1LTP8), ISPD_BIFLD (B3DTQ9), ISPD_BIFLO (Q8G7E2), ISPD_BIFLS (B7GMX1), ISPD_BLOPB (Q494E8), ISPD_BORBR (Q7WCW3), ISPD_BORPA (Q7W5C9), ISPD_BORPD (A9II44), ISPD_BORPE (Q7VZN2), ISPD_BOVIN (E1BCH6), ISPD_BUCAI (P57495), ISPD_BUCAP (Q8K9D6), ISPD_BURCH (A0K867), ISPD_BURCJ (B4EC23), ISPD_BURCM (Q0BED6), ISPD_BURL3 (Q39FB8), ISPD_BURM1 (A9AIT5), ISPD_BURM7 (A3MKM4), ISPD_BURM9 (A2SBD6), ISPD_BURMA (Q62JI5), ISPD_BURMS (A1V500), ISPD_BURO1 (Q1BHA5), ISPD_BURP0 (A3NWE0), ISPD_BURP1 (Q3JR99), ISPD_BURP6 (A3NAL9), ISPD_BURPS (Q63T70), ISPD_BURTA (Q2SWT6), ISPD_BURVG (A4JF20), ISPD_CERS1 (A3PJQ3), ISPD_CERS4 (Q3J2K9), ISPD_CERS5 (A4WSL5), ISPD_CERSK (B9KSH8), ISPD_CHLAB (Q5L6V2), ISPD_CHLCH (Q3AS33), ISPD_CHLCV (Q824I4), ISPD_CHLFF (Q253C1), ISPD_CHLL3 (Q3B3A7), ISPD_CHLMU (Q9PJT1), ISPD_CHLP8 (B3QP85), ISPD_CHLPB (B3EQ34), ISPD_CHLPM (A4SF04), ISPD_CHLPN (Q9Z7X5), ISPD_CHLT2 (B0B835), ISPD_CHLT3 (B3QXK8), ISPD_CHLTA (Q3KLN6), ISPD_CHLTB (B0BCA0), ISPD_CHLTE (Q8KCU3), ISPD_CHLTR (O84468), ISPD_CHRSD (Q1QU73), ISPD_CHRVO (Q7NYL6), ISPD_CITK8 (A8ANW1), ISPD_CLOAB (Q97EC9), ISPD_CLOB1 (A7FZ94), ISPD_CLOB6 (C3KVS6), ISPD_CLOB8 (A6LPN9), ISPD_CLOBB (B2TIF4), ISPD_CLOBH (A5I7N1), ISPD_CLOBJ (C1FMX6), ISPD_CLOBK (B1IGH9), ISPD_CLOBL (A7GJ99), ISPD_CLOBM (B1KTA8), ISPD_CLOD6 (Q18CD1), ISPD_CLOK1 (B9DY87), ISPD_CLOK5 (A5N4M5), ISPD_CLONN (A0PXS4), ISPD_CLOP1 (Q0TMM2), ISPD_CLOPE (Q8XHQ3), ISPD_CLOPS (Q0SQB9), ISPD_CLOTE (Q890M1), ISPD_COLP3 (Q487E9), ISPD_CORDI (Q6NFC1), ISPD_COREF (Q8FMI3), ISPD_CORGB (A4QH60), ISPD_CORGL (Q8NMB8), ISPD_CROS5 (B1WSY4), ISPD_CUPPJ (Q472F2), ISPD_CUTAK (Q6AAV8), ISPD_DANRE (A0JPF9), ISPD_DECAR (Q47EL2), ISPD_DEHM1 (Q3ZAD7), ISPD_DEHMB (A5FP88), ISPD_DEHMC (Q3ZWE1), ISPD_DEIGD (Q1J200), ISPD_DEIRA (Q9RR90), ISPD_DESRM (A4J0Y3), ISPD_DICT6 (B5YF77), ISPD_ECO24 (A7ZQJ1), ISPD_ECO27 (B7UHG6), ISPD_ECO45 (B7MKM1), ISPD_ECO55 (B7LEG5), ISPD_ECO57 (Q8X7Y4), ISPD_ECO5E (B5Z3A9), ISPD_ECO7I (B7NT91), ISPD_ECO81 (B7MYQ2), ISPD_ECO8A (B7LXF9), ISPD_ECOBW (C4ZZQ1), ISPD_ECODH (B1XCS3), ISPD_ECOHS (A8A3M6), ISPD_ECOK1 (A1AEU1), ISPD_ECOL5 (Q0TEB1), ISPD_ECOL6 (Q8FEJ5), ISPD_ECOLC (B1IUT2), ISPD_ECOLI (Q46893), ISPD_ECOLU (B7N6X7), ISPD_ECOSE (B6I6D7), ISPD_ECOSM (B1LQ67), ISPD_ECOUT (Q1R7U4), ISPD_ENT38 (A4WDV2), ISPD_ESCF3 (B7LWK8), ISPD_FRACC (Q2J542), ISPD_GEOKA (Q5L433), ISPD_GEOMG (Q39ZL5), ISPD_GEOSL (Q746Z9), ISPD_GEOTN (A4IJG4), ISPD_GEOUR (A5G938), ISPD_GLOVI (Q7NGU6), ISPD_HAEI8 (Q4QMP4), ISPD_HAEIE (A5UE59), ISPD_HAEIG (A5UHG1), ISPD_HAEIN (O05029), ISPD_HAHCH (Q2SKW7), ISPD_HALH5 (Q9KGF8), ISPD_HALHL (A1WWZ0), ISPD_HUMAN (A4D126), ISPD_IDILO (Q5QUC3), ISPD_KLEP3 (B5XV34), ISPD_KLEP7 (A6TD39), ISPD_LACP7 (A9KSU6), ISPD_LARHH (C1D558), ISPD_LEPIC (Q72P59), ISPD_LEPIN (Q8F7A0), ISPD_LISIN (Q92F40), ISPD_LISMF (Q724H7), ISPD_LISMO (Q8YAB5), ISPD_LYSSC (B1HNM7), ISPD_MANSM (Q65Q78), ISPD_METCA (Q604M2), ISPD_MICAN (B0JUF7), ISPD_MOUSE (Q5RJG7), ISPD_MYCBO (Q7TW54), ISPD_MYCBP (A1KPR8), ISPD_MYCBT (C1AI41), ISPD_MYCLB (B8ZUA7), ISPD_MYCLE (Q9CCW6), ISPD_MYCMM (B2HJ23), ISPD_MYCPA (Q743W5), ISPD_MYCTA (A5U8Q7), ISPD_MYCTO (P9WKG8), ISPD_MYCTU (P9WKG9), ISPD_MYCUA (A0PV29), ISPD_NEIG1 (Q5F829), ISPD_NEIG2 (B4RL14), ISPD_NEIM0 (A9M0U7), ISPD_NEIMA (Q9JTM3), ISPD_NEIMB (Q9JYM4), ISPD_NEIMF (A1KUV0), ISPD_NITEC (Q0AFW3), ISPD_NITEU (Q82UR9), ISPD_NITMU (Q2Y751), ISPD_NITOC (Q3JCS9), ISPD_NOSP7 (B2J1D2), ISPD_NOSS1 (Q8YLX9), ISPD_ORYSJ (Q5N8G1), ISPD_PARMW (Q7U559), ISPD_PARP8 (B2JGK2), ISPD_PARPJ (B2T3X2), ISPD_PARUW (Q6MEE8), ISPD_PARXL (Q13Z31), ISPD_PASMU (P57953), ISPD_PELPB (B4SAG7), ISPD_PELTS (A5D5L4), ISPD_PETMO (A9BHR2), ISPD_PHOLL (Q7N8K7), ISPD_PHOPR (Q6LMT3), ISPD_PROA2 (B4S8U7), ISPD_PROM0 (A3PBH7), ISPD_PROM2 (A8G3G9), ISPD_PROM4 (A9BE76), ISPD_PROM5 (A2BVB5), ISPD_PROM9 (Q31C80), ISPD_PROMA (Q7VDC7), ISPD_PROMM (Q7V647), ISPD_PROMP (Q7V2M1), ISPD_PROMS (A2BPT7), ISPD_PROMT (Q46GW4), ISPD_PSE14 (Q48F81), ISPD_PSEA6 (Q15P31), ISPD_PSEA7 (A6V1F5), ISPD_PSEAB (Q02RA5), ISPD_PSEAE (P57707), ISPD_PSEE4 (Q1I648), ISPD_PSEF5 (Q4KHF4), ISPD_PSEFS (C3K6H8), ISPD_PSEMY (A4XWR9), ISPD_PSEP1 (A5W827), ISPD_PSEPF (Q3KH90), ISPD_PSEPG (B0KSC1), ISPD_PSEPK (Q88MF7), ISPD_PSEPW (B1JB36), ISPD_PSESM (Q886M1), ISPD_PSET1 (Q3IDQ6), ISPD_PSEU2 (Q4ZWQ6), ISPD_PSYA2 (Q4FR76), ISPD_PSYCK (Q1Q9K8), ISPD_RALN1 (Q8XYW3), ISPD_RAT(Q5S6T3), ISPD_RHOE4 (C0ZPR7), ISPD_RHOJR (Q0S890), ISPD_RHOOB (C1BAC2), ISPD_ROSDO (Q165P6), ISPD_RUTMC (A1AX25), ISPD_SACEN (A4F6W3), ISPD_SALA4 (B5F411), ISPD_SALAR (A9MF28), ISPD_SALCH (Q57KJ4), ISPD_SALDC (B5FTS5), ISPD_SALEP (B5QW18), ISPD_SALG2 (B5RDQ3), ISPD_SALHS (B4TFW7), ISPD_SALNS (B4T457), ISPD_SALPA (Q5PEG1), ISPD_SALPB (A9N2D3), ISPD_SALPC (C0PXA7), ISPD_SALPK (B5BEY4), ISPD_SALRD (Q2S210), ISPD_SALSV (B4TTW1), ISPD_SALTI (Q8Z471), ISPD_SALTY (Q8ZMF6), ISPD_SERP5 (A8G9Z2), ISPD_SHEPW (B8CJP8), ISPD_SHIB3 (B2TZI4), ISPD_SHIBS (Q31XA9), ISPD_SHIDS (Q32CI3), ISPD_SHIF8 (Q0T1H8), ISPD_SHIFL (Q7C093), ISPD_SHISS (Q3YYB5), ISPD_SHOC1 (Q5WLT7), ISPD_SODGM (Q2NVM4), ISPD_STRAW (Q82GC8), ISPD_STRCO (Q9L0Q8), ISPD_STRM5 (B4SR88), ISPD_STRMK (B2FK90), ISPD_SYNAS (Q2LUS9), ISPD_SYNC1 (Q3A8C6), ISPD_SYNE7 (Q31QF6), ISPD_SYNFM (A0LIS2), ISPD_SYNJA (Q2JUE5), ISPD_SYNP6 (Q5N3T2), ISPD_SYNPW (A5GMW9), ISPD_SYNS3 (Q0I880), ISPD_SYNS9 (Q3AWK9), ISPD_SYNSC (Q3ALY8), ISPD_SYNY3 (P74323), ISPD_THEAB (B7IF61), ISPD_THEM4 (A6LPA6), ISPD_THEMA (Q9X1B3), ISPD_THENN (B9K8U1), ISPD_THEP1 (A5IMI1), ISPD_THESQ (B1LBT2), ISPD_THET2 (Q72GN3), ISPD_THET8 (Q5SLX2), ISPD_THEVB (Q8DL91), ISPD_THIDA (Q3SK38), ISPD_TOLAT (C4LBQ9), ISPD_TRIEI (Q118M1), ISPD_TRIV2 (Q3MAF5), ISPD_VESOH (A5CW51), ISPD_VIBA3 (B7VK66), ISPD_VIBCH (Q9KUJ2), ISPD_VIBPA (Q87LQ2), ISPD_VIBVU (Q8DC60), ISPD_VIBVY (Q7MHQ4), ISPD_WIGBR (Q8D223), ISPD_XANAC (Q8PLR8), ISPD_XANC8 (Q4UTP4), ISPD_XANCB (B0RU03), ISPD_XANCP (Q8P9Z1), ISPD_XANE5 (Q3BUS8), ISPD_XANOM (Q2P1L0), ISPD_XANOP (B2SUA8), ISPD_XANOR (Q5GYK6), ISPD_XENTR (Q28CZ7), ISPD_XYLF2 (B2I939), ISPD_XYLFA (Q9PDT6), ISPD_XYLFM (B0U660), ISPD_XYLFT (Q87DY4), ISPD_YERP3 (A7FLX8), ISPD_YERPB (B2K577), ISPD_YERPE (Q8ZBP6), ISPD_YERPG (A9R119), ISPD_YERPN (Q1CLR6), ISPD_YERPP (A4TPZ7), ISPD_YERPS (Q66EC3), ISPD_YERPY (B1JJF8), TARI1_STAA3 (Q2FK15), TARI1_STAA8 (Q2G1C0), TARI1_STAAB (Q2YV73), TARI1_STAAC (Q5HJC1), TARI1_STAAM (Q99WW8), TARI1_STAAN (Q7A7V0), TARI1_STAAR (Q6GK57), TARI1_STAAS (Q6GCL7), TARI1_STAAW (Q7A1W0), TARI2_STAA8 (Q2G2C4), TARI2_STAAB (Q2YV76), TARI2_STAAC (Q5HJC5), TARI2_STAAM (P65176), TARI2_STAAN (P65177), TARI2_STAAR (Q6GK63), TARI2_STAAS (Q6GCM3), TARI2_STAAW (Q8NYI0), TARI_BACSH (Q8RKI9), TARI_LACPL (Q88W46), TARI_LISIN (Q92CV0), TARI_LISMF (Q720Y7), TARI_LISMO (Q8Y832), TARI_STAEQ (Q5HRJ7), TARI_STAES (Q8CQ77), TARI_STAS1 (Q4A0A8), TARI_STRA1 (Q3K093), TARI_STRA3 (Q8E4B4), TARI_STRA5 (Q8DYQ7), TARI_STRP2 (Q04K52), TARI_STRP4 (B5E508), TARI_STRP7 (C1C7P9), TARI_STRPI (B1IC62), TARI_STRPJ (B8ZJT5), TARI_STRPN (Q97QE5), TARI_STRPS (B2IQ63), TARI_STRR6 (Q8DPI2), TARI_STRZJ (C1CEM5), TARI_STRZP (C1CL05), TARI_STRZT (C1CR35), TARI_VIBPA (Q87Q30)» more
|
UniProtKB/Swiss-Prot False negative sequences |
57 sequences
ACS1_HAEIF (Q48154), BCS1_HAEIF (Q48230), ISPDF_ALIB4 (A8ER37), ISPDF_AZOC5 (A8IBL6), ISPDF_BARBK (A1USA2), ISPDF_BARHE (Q6G3Z8), ISPDF_BARQU (Q6G164), ISPDF_BART1 (A9IS87), ISPDF_CAMC1 (A7ZCQ2), ISPDF_CAMC5 (A7GZI1), ISPDF_CAMFF (A0RN28), ISPDF_CAMHC (A7I1V2), ISPDF_NITSB (A6Q2K0), ISPDF_SULNB (A6Q7M3), ISPDF_TROW8 (Q83NK3), ISPDF_TROWT (Q83MX3), ISPDF_WOLPM (Q73G24), ISPDF_WOLTR (Q5GSM7), ISPD_ALTMD (B4RZG5), ISPD_AZOPC (B6YQA2), ISPD_BACFN (Q5L917), ISPD_BACFR (Q64P77), ISPD_BACTN (Q8A0U8), ISPD_CALBD (B9MJW2), ISPD_CALS4 (Q8R7S6), ISPD_CALS8 (A4XLJ3), ISPD_CARHZ (Q3A9N7), ISPD_CORJK (Q4JXJ7), ISPD_CROS8 (A7MJ57), ISPD_ENDTX (B1GYT4), ISPD_FUSNN (Q8R6H2), ISPD_HAEDU (Q7VLT5), ISPD_LACE2 (C4Z312), ISPD_LEPBJ (Q04VR0), ISPD_LEPBL (Q04XR1), ISPD_MOOTA (Q2RFM0), ISPD_NEOSM (Q2GEM3), ISPD_NOCFA (Q5Z2R3), ISPD_PECAS (Q6D1B3), ISPD_PECCP (C6DDG2), ISPD_PHOV8 (A6KXL8), ISPD_PORG3 (B2RJ15), ISPD_PORGI (Q7MUQ9), ISPD_RHOBA (Q7UM15), ISPD_RUBXD (Q1AU08), ISPD_SHEAM (A1S4D9), ISPD_SHEDO (Q12PZ2), ISPD_SHEFN (Q086A8), ISPD_SHEHH (B0TK06), ISPD_SHELP (A3QC79), ISPD_SHEON (Q8EBR2), ISPD_SHEPA (A8H1S7), ISPD_SHESH (A8FST0), ISPD_SOLUE (Q027G1), ISPD_SYMTH (Q67JP5), ISPD_THEFY (Q47LV0), TARI_LACP3 (Q03A83)» more |
UniProtKB/Swiss-Prot False positive sequences |
7 sequences
GPI14_GIBZE (Q4I073), MYBP_DICDI (Q55DP9), NUD13_MOUSE (Q8JZU0), SQUS_ECOLI (P32140), SQUS_SALTY (Q8ZKT7), TAF1B_CAEEL (O01914), URED_METPP (A2SDR5)» more |
PDB [Detailed view] |
48 PDB
1H3M; 1I52; 1INI; 1INJ; 1VGT; 1VGU; 1VGW; 1VGZ; 1VPA; 1W55; 1W57; 1W77; 2PX7; 2VSH; 2VSI; 2XWN; 2YC3; 2YC5; 2YCM; 3F1C; 3N9W; 3OKR; 3Q7U; 3Q80; 4CVH; 4JIS; 4NAI; 4NAK; 4NAL; 4NAN; 4YS8; 4ZDQ; 5DDT; 5DDV; 5HS2; 5MRM; 5MRN; 5MRO; 5MRP; 5MRQ; 6XHP; 6XHQ; 6XHR; 6XHS; 6XHT; 7KMW; 8XHU; 8XKF » more |