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We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

PROSITE entry PS01360


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PURL: https://purl.expasy.org/prosite/signature/PS01360

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General information about the entry

Entry name [info] ZF_MYND_1
Accession [info] PS01360
Entry type [info] PATTERN
Date [info] 01-JAN-2003 CREATED;
01-JAN-2003 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC50865

Name and characterization of the entry

Description [info] Zinc finger MYND-type signature.
Pattern [info] 
[CH]-x(2,4)-C-x(7,17)-C-x(0,2)-C-x(4)-[YFT]-C-x(3)-[CH]-x(6,9)-H-
x(3,4)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 104 in 104 different sequences
Number of true positive hits 101 in 101 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 9
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.12 %
Recall (true positives / (true positives + false negatives)) 91.82 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 101 sequences 

ANKY1_HUMAN (Q9P2S6), ANKY2_BOVIN (Q0VCS9), ANKY2_CHICK (Q5ZMD2), 

ANKY2_HUMAN (Q8IV38), ANKY2_MOUSE (Q3TPE9), ANMY1_MOUSE (Q8C0W1), 
ASHR1_ARATH (Q7XJS0), DEAF1_DROME (Q24180), DEAF1_HUMAN (O75398), 
DEAF1_MOUSE (Q9Z1T5), DEAF1_PANTR (O77562), DEAF1_RAT   (O88450), 
EGL9_CAEEL  (G5EBV0), EGLN1_HUMAN (Q9GZT9), EGLN1_MOUSE (Q91YE3), 
FB342_ARATH (Q9FK27), FB76_ARATH  (Q9FYF9), GACZ_DICDI  (Q55DW9), 
MSS51_HUMAN (Q4VC12), MSS51_MOUSE (Q9D5Z5), MSS51_RAT   (D3ZKV9), 
MTG16_CHICK (Q5F3B1), MTG16_HUMAN (O75081), MTG16_MOUSE (O54972), 
MTG8R_HUMAN (O43439), MTG8R_MOUSE (O70374), MTG8R_XENLA (Q9IAB2), 
MTG8_HUMAN  (Q06455), MTG8_MOUSE  (Q61909), MUB1_ASPCL  (A1CBG9), 
MUB1_ASPFC  (B0Y1D1), MUB1_ASPFN  (B8NKS1), MUB1_ASPFU  (Q4WVI6), 
MUB1_ASPNC  (A2RA63), MUB1_ASPOR  (Q2U685), MUB1_ASPTN  (Q0CW83), 
MUB1_EMENI  (O42631), MUB1_NEOFI  (A1DDX0), MUB1_SCHPO  (P87311), 
MUB1_YEAST  (Q03162), PDCD2_BOVIN (Q2YDC9), PDCD2_HUMAN (Q16342), 
PDCD2_MOUSE (P46718), PDCD2_RAT   (P47816), SET14_CAEEL (Q09415), 
SET6_SCHPO  (O94256), SMY2A_DANRE (Q5BJI7), SMY2A_XENLA (Q7ZXV5), 
SMY2B_DANRE (Q5RGL7), SMY2B_XENLA (Q6GN68), SMYD1_HUMAN (Q8NB12), 
SMYD1_MOUSE (P97443), SMYD2_BOVIN (Q0P585), SMYD2_CHICK (E1C5V0), 
SMYD2_HUMAN (Q9NRG4), SMYD2_MOUSE (Q8R5A0), SMYD2_PIG   (C3RZA1), 
SMYD2_RAT   (Q7M6Z3), SMYD3_HUMAN (Q9H7B4), SMYD3_MOUSE (Q9CWR2), 
SMYD4_CHICK (Q5F3V0), SMYD4_DANRE (Q08C84), SMYD4_HUMAN (Q8IYR2), 
SMYD4_MOUSE (Q8BTK5), SMYD4_PONAB (Q5R5X9), SMYDL_CAEEL (Q8I4F7), 
TDRD1_DANRE (Q58EK5), TDRD1_HUMAN (Q9BXT4), TDRD1_MOUSE (Q99MV1), 
TDRD1_ORYLA (A9CPT4), UBP15_ARATH (Q9FPS9), UBP15_ORYSJ (Q0E2F9), 
UBP16_ARATH (Q9SB51), UBP17_ARATH (Q9FKP5), UBP18_ARATH (Q67XW5), 
UBP19_ARATH (Q9SJA1), UBP19_HUMAN (O94966), UBP19_MOUSE (Q3UJD6), 
UBP19_RAT   (Q6J1Y9), Y2140_DICDI (Q54DL6), Y2454_DICDI (Q54D67), 
Y3589_DICDI (Q557F7), Y3591_DICDI (Q557F6), Y4059_DICDI (Q54Q80), 
Y7331_DICDI (Q54ZX8), Y8495_DICDI (Q54IV4), YR331_MIMIV (Q5UQS2), 
ZMY10_DANRE (F1QN74), ZMY10_DROME (Q9VU41), ZMY10_HUMAN (O75800), 
ZMY10_MOUSE (Q99ML0), ZMY10_RAT   (Q6AXZ5), ZMY10_XENLA (Q5FWU8), 
ZMY11_HUMAN (Q15326), ZMY11_MOUSE (Q8R5C8), ZMY12_HUMAN (Q9H0C1), 
ZMY19_HUMAN (Q96E35), ZMY19_MOUSE (Q9CQG3), ZMY19_RAT   (Q7TSV3), 
ZMYD8_DROME (Q7KRS9), ZMYD8_HUMAN (Q9ULU4)
» more

UniProtKB/Swiss-Prot
False negative sequences		 9 sequences 

ATXR2_ARATH (Q5PP37), BIG_ARATH   (Q9SRU2), BIG_ORYSJ   (B9G2A8), 

SMYD5_CHICK (Q5ZIZ2), SMYD5_DANRE (F1RET2), SMYD5_HUMAN (Q6GMV2), 
SMYD5_MOUSE (Q3TYX3), SMYD5_XENLA (Q6GPQ4), ZMY15_HUMAN (Q9H091)
» more

UniProtKB/Swiss-Prot
False positive sequences		 3 sequences 

SET5_CRYNB  (P0CR43), SET5_CRYNJ  (P0CR42), VE5_MMPV1   (P24834)


				
	

	

		PDB
[Detailed view]		
		
			73 PDB
			


			pdb_00002d8q; pdb_00002dan; pdb_00002dj8; pdb_00002jw6; pdb_00002od1; pdb_00002odd; pdb_00003mek; pdb_00003n71; pdb_00003oxf; pdb_00003oxg; pdb_00003oxl; pdb_00003pdn; 
			
				pdb_00003qwp; pdb_00003qwv; pdb_00003qww; pdb_00003rib; pdb_00003ru0; pdb_00003s7b; pdb_00003s7d; pdb_00003s7f; pdb_00003s7j; pdb_00003tg4; pdb_00003tg5; pdb_00004a24; 
				pdb_00004o6f; pdb_00004wuy; pdb_00004ynd; pdb_00005arf; pdb_00005arg; pdb_00005ccl; pdb_00005ccm; pdb_00005ex0; pdb_00005ex3; pdb_00005hda; pdb_00005hi7; pdb_00005hq8; 
				pdb_00005kjk; pdb_00005kjl; pdb_00005kjm; pdb_00005kjn; pdb_00005mq4; pdb_00005v37; pdb_00005v3h; pdb_00005wcg; pdb_00005xxd; pdb_00005xxg; pdb_00005xxj; pdb_00005yjo; 
				pdb_00006cbx; pdb_00006cby; pdb_00006ijl; pdb_00006mon; pdb_00006n3g; pdb_00006o9o; pdb_00006p6g; pdb_00006p6k; pdb_00006p7z; pdb_00006paf; pdb_00006yuh; pdb_00006zrb; 
				pdb_00007bj1; pdb_00007o2a; pdb_00007o2b; pdb_00007o2c; pdb_00007qlb; pdb_00007qnr; pdb_00007qnu; pdb_00008j07; pdb_00008owo; pdb_00009ckc; pdb_00009ckf; pdb_00009ckg; 
				pdb_00009de2
			
			

			» more