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ProRule PRU00027


General rule information [?]

Accession PRU00027
Dates 12-DEC-2003 (Created)
19-NOV-2022 (Last updated, Version 10)
Data class Domain;
Predictors PROSITE; PS50808; ZF_BED
Name Zinc finger BED-type
Function Undefined
Scope(s) Eukaryota
Example(s) P34478 (GEI13_CAEEL);

Propagated annotation [?]

Keywords [?]

Zinc-finger
case <Feature:PS50808:26=[CH]> and <Feature:PS50808:29=[CH]> and <Feature:PS50808:46=[CH]> and <Feature:PS50808:51=[CH]>
Zinc
Metal-binding
end case

Features [?]

From: PS50808
Key From To Description Tag Condition FTGroup
case <Feature:PS50808:26=[C]> and <Feature:PS50808:29=[C]> and <Feature:PS50808:46=[H]> and <Feature:PS50808:51=[CH]>
ZN_FING from to /note="BED-type #"
else case <Feature:PS50808:26=[CH]> and <Feature:PS50808:29=[CH]> and <Feature:PS50808:46=[CH]> and <Feature:PS50808:51=[CH]>
ZN_FING from to /note="BED-type #; atypical"
else
ZN_FING from to /note="BED-type #; degenerate"
end case
BINDING 26 26 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 29 29 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 46 46 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 51 51 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1

Additional information [?]

Size range 49-62 amino acids
Related rules None
Fusion None
Repeats 1-4
Topology Undefined

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.



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UniProtKB rule member sequences [?]