ProRule PRU00027

General rule information [?]

Accession PRU00027
Dates 12-DEC-2003 (Created)
19-NOV-2022 (Last updated, Version 10)
Data class Domain;
Predictors PROSITE; PS50808; ZF_BED
Name Zinc finger BED-type
Function Undefined
Scope(s) Eukaryota
Example(s) P34478 (GEI13_CAEEL);

Propagated annotation [?]

Keywords [?]

case <Feature:PS50808:26=[CH]> and <Feature:PS50808:29=[CH]> and <Feature:PS50808:46=[CH]> and <Feature:PS50808:51=[CH]>
end case

Features [?]

From: PS50808
Key From To Description Tag Condition FTGroup
case <Feature:PS50808:26=[C]> and <Feature:PS50808:29=[C]> and <Feature:PS50808:46=[H]> and <Feature:PS50808:51=[CH]>
ZN_FING from to /note="BED-type #"
else case <Feature:PS50808:26=[CH]> and <Feature:PS50808:29=[CH]> and <Feature:PS50808:46=[CH]> and <Feature:PS50808:51=[CH]>
ZN_FING from to /note="BED-type #; atypical"
ZN_FING from to /note="BED-type #; degenerate"
end case
BINDING 26 26 /ligand="Zn(2+)"
[CH] 1
BINDING 29 29 /ligand="Zn(2+)"
[CH] 1
BINDING 46 46 /ligand="Zn(2+)"
[CH] 1
BINDING 51 51 /ligand="Zn(2+)"
[CH] 1

Additional information [?]

Size range 49-62 amino acids
Related rules None
Fusion None
Repeats 1-4
Topology Undefined


PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.

View rule in raw text format (no links)

UniProtKB rule member sequences [?]