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annotation rule: PRU00071

General rule information [?]

Accession PRU00071
Dates 12-DEC-2003 (Created)
16-DEC-2016 (Last updated, Version 11)
Data class Domain
Predictors PROSITE; PS50884; ZF_DOF_2
Name Zinc finger Dof-type
Function Like other zinc fingers the Dof domain has a dual activity: it binds DNA in a sequence-specific manner with the core binding site formed by the AAAG sequence and it can also mediates protein-protein interaction.

Propagated annotation [?]


Comments [?]

Subcellular location Nucleus.

Cross-references [?]

PROSITE PS01361; ZF_DOF_1; 1;

Gene Ontology [?]

GO:0003677; Molecular function: DNA binding.
GO:0005634; Cellular component: nucleus.

Keywords [?]

case <Feature:PS50884:3=[CH]> and <Feature:PS50884:6=[CH]> and <Feature:PS50884:28=[CH]> and <Feature:PS50884:31=[CH]>
end case


Features [?]

case <Feature:PS50884:3=[C]> and <Feature:PS50884:6=[C]> and <Feature:PS50884:28=[C]> and <Feature:PS50884:31=[C]>
From: PS50884
Key     From     To       Description   Tag   Condition   FTGroup
ZN_FING     from     to       Dof-type #        
else case <Feature:PS50884:3=[CH]> and <Feature:PS50884:6=[CH]> and <Feature:PS50884:28=[CH]> and <Feature:PS50884:31=[CH]>
ZN_FING     from     to       Dof-type #; atypical        
else
ZN_FING     from     to       Dof-type #; degenerate        
end case


Additional information [?]

Size range 55-55 amino acids
Related rules None
Repeats 1
Topology Undefined
Example Q43385 (DOF37_ARATH)
Scope
Eukaryota; Magnoliophyta

Copyright

PROSITE is copyright. It is produced by the SIB Swiss Institute Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified. Usage by and for commercial entities requires a license agreement. For information about the licensing scheme send an email to license@isb-sib.ch or see: prosite_license.html.



UniProtKB rule member sequences [?]

UniProtKB/Swiss-Prot sets
Eukaryota [43]