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We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

ProRule PRU00228


View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU00228
General rule information [?]

Accession PRU00228
Dates 12-DEC-2003 (Created)
19-NOV-2022 (Last updated, Version 10)
Data class Domain;
Predictors PROSITE; PS50135; ZF_ZZ_2
Name Zinc finger ZZ-type
Function Undefined
Scope(s) Eukaryota
Example(s) Q92793;

Propagated annotation [?]

Keywords [?]

Zinc-finger
case (<Feature:PS50135:6=[CH]> and <Feature:PS50135:9=[CH]> and <Feature:PS50135:30=[CH]> and <Feature:PS50135:33=[CH]>) or (<Feature:PS50135:21=[CH]> and <Feature:PS50135:24=[CH]> and <Feature:PS50135:43=[HC]> and <Feature:PS50135:47=[HC]>)
Zinc
Metal-binding
end case

Cross-references [?]

PROSITE PS01357; ZF_ZZ_1; 1;

Features [?]

From: PS50135
Key From To Description Tag Condition FTGroup
case (<Feature:PS50135:6=[C]> and <Feature:PS50135:9=[C]> and <Feature:PS50135:30=[C]> and <Feature:PS50135:33=[C]>) and (<Feature:PS50135:21=[C]> and <Feature:PS50135:24=[C]> and <Feature:PS50135:43=[H]> and <Feature:PS50135:47=[H]>)
ZN_FING from to /note="ZZ-type #"
else case (<Feature:PS50135:6=[CH]> and <Feature:PS50135:9=[CH]> and <Feature:PS50135:30=[CH]> and <Feature:PS50135:33=[CH]>) and (<Feature:PS50135:21=[CH]> and <Feature:PS50135:24=[CH]> and <Feature:PS50135:43=[HC]> and <Feature:PS50135:47=[HC]>)
ZN_FING from to /note="ZZ-type #; atypical"
else
ZN_FING from to /note="ZZ-type #; degenerate"
end case
BINDING 6 6 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 9 9 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 21 21 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#2"		 [CH] 2
BINDING 24 24 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#2"		 [CH] 2
BINDING 30 30 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 33 33 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 43 43 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#2"		 [CH] 2
BINDING 47 47 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#2"		 [CH] 2

Additional information [?]

Size range 42-48 amino acids
Related rules None
Fusion None
Repeats 1
Topology Undefined

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.

UniProtKB rule member sequences [?]