We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
ProRule PRU00298
View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU00298
General rule information
[?]
| Accession | PRU00298 |
| Dates | 12-DEC-2003 (Created)
04-NOV-2024 (Last updated, Version 24) |
| Data class | Domain; |
| Predictors |
PROSITE; PS50292; PEROXIDASE_3 |
Name | Animal heme peroxidase |
| Function | Removal of H(2)O(2) |
| Scope(s) |
Eukaryota |
| Example(s) | P11247; |
Propagated annotation
[?]
Comments
[?]
| case <FTGroup:1> and <FTGroup:2> and <FTGroup:3> | |
| CATALYTIC ACTIVITY | Reaction=H2O2 + AH2 = A + 2 H2O; Xref=Rhea:RHEA:30275, ChEBI:CHEBI:13193, ChEBI:CHEBI:15377, ChEBI:CHEBI:16240, ChEBI:CHEBI:17499; |
| COFACTOR | Name=Ca(2+); Xref=ChEBI:CHEBI:29108; Note=Binds 1 Ca(2+) ion per heterodimer.; |
| COFACTOR | Name=heme b; Xref=ChEBI:CHEBI:60344; Note=Binds 1 heme b (iron(II)-protoporphyrin IX) group covalently per heterodimer.; |
| end case | |
| SIMILARITY | Belongs to the peroxidase family. |
Keywords
[?]
| case <FTGroup:1> and <FTGroup:2> and <FTGroup:3> | |
| Oxidoreductase | |
| Peroxidase | |
| end case | |
| case <FTGroup:1> | |
| Iron | |
| Heme | |
| end case | |
| case <FTGroup:3> | |
| Calcium | |
| end case | |
| case <FTGroup:1> or <FTGroup:3> | |
| Metal-binding | |
| end case | |
| case <FTTag:disulf> | |
| Disulfide bond | |
| end case | |
Gene Ontology
[?]
| case <FTGroup:1> and <FTGroup:2> and <FTGroup:3> | |
| GO:0016491; Molecular function:oxidoreductase activity | |
| GO:0004601; Molecular function:peroxidase activity | |
| end case | |
Cross-references
[?]
Features
[?]
| From: PS50292 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| case <Feature:PS50292:4=C> and <Feature:PS50292:111=C> | ||||||||||||
| CHAIN | 2 | 108 | /note=" |
|||||||||
| CHAIN | 109 | Cter | /note=" |
|||||||||
| end case | ||||||||||||
| BINDING | 95 | 95 | /ligand="heme b" /ligand_id="ChEBI:CHEBI:60344" /note="covalent" |
D | 1 | |||||||
| BINDING | 238 | 238 | /ligand="heme b" /ligand_id="ChEBI:CHEBI:60344" /note="covalent" |
E | 1 | |||||||
| ACT_SITE | 96 | 96 | /note="Proton acceptor" | H | 2 | |||||||
| SITE | 235 | 235 | /note="Transition state stabilizer" | R | 2 | |||||||
| BINDING | 97 | 97 | /ligand="Ca(2+)" /ligand_id="ChEBI:CHEBI:29108" |
D | 3 | |||||||
| BINDING | 164 | 164 | /ligand="Ca(2+)" /ligand_id="ChEBI:CHEBI:29108" |
[ST] | 3 | |||||||
| BINDING | 166 | 166 | /ligand="Ca(2+)" /ligand_id="ChEBI:CHEBI:29108" |
[FY] | 3 | |||||||
| BINDING | 168 | 168 | /ligand="Ca(2+)" /ligand_id="ChEBI:CHEBI:29108" |
D | 3 | |||||||
| BINDING | 170 | 170 | /ligand="Ca(2+)" /ligand_id="ChEBI:CHEBI:29108" |
[ST] | 3 | |||||||
| BINDING | 332 | 332 | /ligand="heme b" /ligand_id="ChEBI:CHEBI:60344" /ligand_part="Fe" /ligand_part_id="ChEBI:CHEBI:18248" /note="axial binding residue" |
H | ||||||||
| DISULFID | 4 | 17 | disulf | C-x*-C | ||||||||
| DISULFID | 111 | 121 | disulf | C-x*-C | ||||||||
| DISULFID | 115 | 139 | disulf | C-x*-C | ||||||||
| DISULFID | 217 | 228 | disulf | C-x*-C | ||||||||
| DISULFID | 435 | 491 | disulf | C-x*-C | ||||||||
| DISULFID | 534 | 560 | disulf | C-x*-C | ||||||||
Additional information
[?]
| Size range | 510-750 amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 1-6 |
| Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
[?]
- UniProtKB/Swiss-Prot sets
Eukaryota [76] All [ 76 ]
- Retrieve set of proteins with 3D structure for this domain