ProRule PRU00325
View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU00325
General rule information
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| Accession | PRU00325 |
| Dates | 12-MAR-2004 (Created)
21-NOV-2019 (Last updated, Version ) |
| Data class | Domain; |
| Predictors |
PROSITE; PS50966; ZF_SWIM |
Name | Zinc finger SWIM-type |
| Function | Undefined |
| Scope(s) |
Eukaryota Bacteria Archaea |
| Example(s) | P33353; |
Propagated annotation
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Keywords
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| Zinc-finger | |
| case <Feature:PS50966:16=[CH]> and <Feature:PS50966:18=[CH]> and <Feature:PS50966:27=[CH]> and <Feature:PS50966:29=[CH]> | |
| Zinc | |
| Metal-binding | |
| end case | |
Features
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| From: PS50966 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| case <Feature:PS50966:16=[C]> and <Feature:PS50966:18=[C]> and <Feature:PS50966:27=[C]> and <Feature:PS50966:29=[H]> | ||||||||||||
| ZN_FING | from | to | /note="SWIM-type #" | |||||||||
| else case <Feature:PS50966:16=[CH]> and <Feature:PS50966:18=[CH]> and <Feature:PS50966:27=[CH]> and <Feature:PS50966:29=[CH]> | ||||||||||||
| ZN_FING | from | to | /note="SWIM-type #; atypical" | |||||||||
| else | ||||||||||||
| ZN_FING | from | to | /note="SWIM-type #; degenerate" | |||||||||
| end case | ||||||||||||
Additional information
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| Size range | 25-45 amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 1-2 |
| Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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- UniProtKB/Swiss-Prot sets
Archaea [2] Bacteria [5] Eukaryota [39] All [ 46 ]
- Retrieve set of proteins with 3D structure for this domain