We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
ProRule PRU00350
View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU00350
General rule information
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| Accession | PRU00350 |
| Dates | 26-JUL-2004 (Created)
21-NOV-2019 (Last updated, Version 10) |
| Data class | Domain; |
| Predictors |
PROSITE; PS50958; SMB_2 |
Name | Somatomedin B (SMB) domain |
| Function | The SMB domain of vitronectin has been demonstrated to interact with both the urokinase receptor and the plasminogen activator inhibitor-1 (PAI-1) and the conserved cysteines of the NPP1 somatomedin B-like domain have been shown to mediate homodimerization. |
| Scope(s) |
Eukaryota Metazoa |
| Example(s) | Q9GZM7; |
Propagated annotation
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Keywords
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| case <FTTag:disulf> | |
| Disulfide bond | |
| end case | |
Cross-references
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| PROSITE | PS00524; SMB_1; 1; |
Features
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| From: PS50958 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| DOMAIN | from | to | /note="SMB #" | |||||||||
| DISULFID | 5 | 9 | /note="Alternate" | disulf | C-x*-C | |||||||
| DISULFID | 5 | 21 | /note="Alternate" | disulf | C-x*-C | |||||||
| DISULFID | 9 | 39 | /note="Alternate" | disulf | C-x*-C | |||||||
| DISULFID | 19 | 21 | /note="Alternate" | disulf | C-x*-C | |||||||
| DISULFID | 19 | 32 | /note="Alternate" | disulf | C-x*-C | |||||||
| DISULFID | 25 | 31 | disulf | C-x*-C | ||||||||
| DISULFID | 32 | 39 | /note="Alternate" | disulf | C-x*-C | |||||||
Additional information
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| Size range | 35-55 amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 2 |
| Topology | Not cytoplasmic |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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- UniProtKB/Swiss-Prot sets
Eukaryota [38] All [ 38 ]
- Retrieve set of proteins with 3D structure for this domain