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annotation rule: PRU00450

General rule information [?]

Accession PRU00450
Dates 28-JUN-2005 (Created)
30-MAR-2021 (Last updated, Version 7)
Data class Domain
Predictors PROSITE; PS50876; ZF_INTEGRASE
Name Zinc finger integrase-type
Function required for integration activity and enhances tetramerization in the context of the full-length integrase.

Propagated annotation [?]


Keywords [?]

Zinc-finger
case <Feature:PS50876:10=[CH]> and <Feature:PS50876:14=[CH]> and <Feature:PS50876:38=[CH]> and <Feature:PS50876:41=[CH]>
Zinc
Metal-binding
end case


Features [?]

case <Feature:PS50876:10=[H]> and <Feature:PS50876:14=[H]> and <Feature:PS50876:38=[C]> and <Feature:PS50876:41=[C]>
From: PS50876
Key     From     To       Description   Tag   Condition   FTGroup
ZN_FING     from     to       Integrase-type #        
else case <Feature:PS50876:10=[CH]> and <Feature:PS50876:14=[CH]> and <Feature:PS50876:38=[CH]> and <Feature:PS50876:41=[CH]>
ZN_FING     from     to       Integrase-type #; atypical        
else
ZN_FING     from     to       Integrase-type #; degenerate        
end case

METAL     10     10       Zinc #1     [CH]   1
METAL     14     14       Zinc #1     [CH]   1
METAL     38     38       Zinc #1     [CH]   1
METAL     41     41       Zinc #1     [CH]   1

Additional information [?]

Size range 30-54 amino acids
Related rules None
Repeats 1-3
Topology Undefined
Example P51517 (POL_SRV2)
Scope
Eukaryota
Viruses

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.


View rule in raw text format (no links)


UniProtKB rule member sequences [?]