We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
ProRule PRU00457
View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU00457
General rule information
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| Accession | PRU00457 |
| Dates | 29-JUN-2005 (Created)
27-MAR-2023 (Last updated, Version 13) |
| Data class | Domain; |
| Predictors |
PROSITE; PS50994; INTEGRASE |
Name | Integrase catalytic domain |
| Function | The integrase catalytic domain catalyzes a series of reactions to integrate the viral genome into a host chromosome. |
| Scope(s) |
Eukaryota Bacteria Viruses |
| Example(s) | O92956; |
Propagated annotation
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Keywords
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| case <FTGroup:1> | |
| Hydrolase | |
| Nuclease | |
| Endonuclease | |
| DNA integration | |
| DNA recombination | |
| end case | |
Gene Ontology
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| case <FTGroup:1> | |
| GO:0004518; Molecular function:nuclease activity | |
| GO:0004519; Molecular function:endonuclease activity | |
| GO:0016787; Molecular function:hydrolase activity | |
| GO:0006310; Molecular function:DNA recombination | |
| GO:0006313; Molecular function:DNA transposition | |
| end case | |
Features
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| From: PS50994 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| DOMAIN | from | to | /note="Integrase catalytic #" | |||||||||
| BINDING | 12 | 12 | /ligand="Mg(2+)" /ligand_id="ChEBI:CHEBI:18420" /ligand_note="catalytic" |
D | 1 | |||||||
| BINDING | 71 | 71 | /ligand="Mg(2+)" /ligand_id="ChEBI:CHEBI:18420" /ligand_note="catalytic" |
D | 1 | |||||||
Additional information
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| Size range | 43-217 amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 1 |
| Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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- UniProtKB/Swiss-Prot sets
Bacteria [72] Eukaryota [93] Viruses [125] All [ 290 ]
- Retrieve set of proteins with 3D structure for this domain