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ProRule PRU00469


General rule information [?]

Accession PRU00469
Dates 10-AUG-2005 (Created)
19-NOV-2022 (Last updated, Version 8)
Data class Domain;
Predictors PROSITE; PS51134; ZF_TFIIB
Name Zinc finger TFIIB-type
Function The zinc finger contacts the rbp1 subunit of Pol II through its dock domain
Scope(s) Eukaryota
Archaea
Example(s) Q00403 (TF2B_HUMAN);

Propagated annotation [?]

Keywords [?]

Zinc-finger
case <Feature:PS51134:5=[CH]> and <Feature:PS51134:8=[HC]> and <Feature:PS51134:24=[CH]> and <Feature:PS51134:27=[CH]>
Zinc
Metal-binding
end case

Features [?]

From: PS51134
Key From To Description Tag Condition FTGroup
case <Feature:PS51134:5=[C]> and <Feature:PS51134:8=[CH]> and <Feature:PS51134:24=[C]> and <Feature:PS51134:27=[C]>
ZN_FING from to /note="TFIIB-type #"
else case <Feature:PS51134:5=[CH]> and <Feature:PS51134:8=[HC]> and <Feature:PS51134:24=[CH]> and <Feature:PS51134:27=[CH]>
ZN_FING from to /note="TFIIB-type #; atypical"
else
ZN_FING from to /note="TFIIB-type #; degenerate"
end case
BINDING 5 5 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"
[CH] 1
BINDING 8 8 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"
[CH] 1
BINDING 24 24 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"
[CH] 1
BINDING 27 27 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"
[CH] 1

Additional information [?]

Size range 18-33 amino acids
Related rules None
Fusion None
Repeats 1
Topology Undefined

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.



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UniProtKB rule member sequences [?]