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annotation rule: PRU00469

General rule information [?]

Accession PRU00469
Dates 10-AUG-2005 (Created)
19-MAR-2021 (Last updated, Version 6)
Data class Domain
Predictors PROSITE; PS51134; ZF_TFIIB
Name Zinc finger TFIIB-type
Function The zinc finger contacts the rbp1 subunit of Pol II through its dock domain

Propagated annotation [?]


Keywords [?]

Zinc-finger
case <Feature:PS51134:5=[CH]> and <Feature:PS51134:8=[HC]> and <Feature:PS51134:24=[CH]> and <Feature:PS51134:27=[CH]>
Zinc
Metal-binding
end case


Features [?]

case <Feature:PS51134:5=[C]> and <Feature:PS51134:8=[CH]> and <Feature:PS51134:24=[C]> and <Feature:PS51134:27=[C]>
From: PS51134
Key     From     To       Description   Tag   Condition   FTGroup
ZN_FING     from     to       TFIIB-type #        
else case <Feature:PS51134:5=[CH]> and <Feature:PS51134:8=[HC]> and <Feature:PS51134:24=[CH]> and <Feature:PS51134:27=[CH]>
ZN_FING     from     to       TFIIB-type #; atypical        
else
ZN_FING     from     to       TFIIB-type #; degenerate        
end case

METAL     5     5       Zinc #1     [CH]   1
METAL     8     8       Zinc #1     [CH]   1
METAL     24     24       Zinc #1     [CH]   1
METAL     27     27       Zinc #1     [CH]   1

Additional information [?]

Size range 18-33 amino acids
Related rules None
Repeats 1
Topology Undefined
Example Q00403 (TF2B_HUMAN)
Scope
Eukaryota
Archaea

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.


View rule in raw text format (no links)


UniProtKB rule member sequences [?]