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annotation rule: PRU00601

General rule information [?]

Accession PRU00601
Dates 14-DEC-2011 (Created)
19-NOV-2022 (Last updated, Version 6)
Data class Domain
Predictors PROSITE; PS51266; ZF_CHY
Name Zinc finger CHY-type
Function Fill in

Propagated annotation [?]


Gene Ontology [?]

case (<Feature:PS51266:8=[CH]> and <Feature:PS51266:10=[CH]> and <Feature:PS51266:28=[CH]> and <Feature:PS51266:31=[CH]>) or (<Feature:PS51266:21=[CH]> and <Feature:PS51266:22=[CH]> and <Feature:PS51266:32=[CH]> and <Feature:PS51266:38=[CH]>) or (<Feature:PS51266:50=[CH]> and <Feature:PS51266:53=[CH]> and <Feature:PS51266:63=[CH]> and <Feature:PS51266:66=[CH]>)
GO:0008270; Molecular function: zinc ion binding.

Keywords [?]

Metal-binding
Zinc
end case

Zinc-finger

Features [?]

case <Feature:PS51266:8=[C]> and <Feature:PS51266:10=[H]> and <Feature:PS51266:28=[C]> and <Feature:PS51266:31=[C]> and <Feature:PS51266:21=[C]> and <Feature:PS51266:22=[C]> and <Feature:PS51266:32=[H]> and <Feature:PS51266:38=[H]> and <Feature:PS51266:50=[C]> and <Feature:PS51266:53=[C]> and <Feature:PS51266:63=[C]> and <Feature:PS51266:66=[C]>
From: PS51266
Key     From     To       Description   Tag   Condition   FTGroup
ZN_FING     from     to       CHY-type #        
else case <Feature:PS51266:8=[CH]> and <Feature:PS51266:10=[CH]> and <Feature:PS51266:28=[CH]> and <Feature:PS51266:31=[CH]> and <Feature:PS51266:21=[CH]> and <Feature:PS51266:22=[CH]> and <Feature:PS51266:32=[CH]> and <Feature:PS51266:38=[CH]> and <Feature:PS51266:50=[CH]> and <Feature:PS51266:53=[CH]> and <Feature:PS51266:63=[CH]> and <Feature:PS51266:66=[CH]>
ZN_FING     from     to       CHY-type #; atypical        
else
ZN_FING     from     to       CHY-type #; degenerate        
end case

BINDING     8     8       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1     [CH]   1
BINDING     10     10       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1     [CH]   1
BINDING     21     21       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2     [CH]   2
BINDING     22     22       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2     [CH]   2
BINDING     28     28       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1     [CH]   1
BINDING     31     31       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1     [CH]   1
BINDING     32     32       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2     [CH]   2
BINDING     38     38       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2     [CH]   2
BINDING     50     50       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#3     [CH]   3
BINDING     53     53       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#3     [CH]   3
BINDING     63     63       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#3     [CH]   3
BINDING     66     66       /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#3     [CH]   3

Additional information [?]

Size range 58-95 amino acids
Related rules None
Repeats 1
Topology Undefined
Example O14033 (YEMC_SCHPO)
Scope
Eukaryota
Comments None

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.


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UniProtKB rule member sequences [?]