ProRule PRU00601
General rule information
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Accession | PRU00601 |
Dates | 14-DEC-2011 (Created)
19-NOV-2022 (Last updated, Version 6) |
Data class | Domain; |
Predictors |
PROSITE; PS51266; ZF_CHY |
Name | Zinc finger CHY-type |
Function | Fill in |
Scope(s) |
Eukaryota |
Example(s) | O14033 (YEMC_SCHPO); |
Propagated annotation
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Keywords
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Metal-binding | |
Zinc | |
end case | |
Zinc-finger |
Gene Ontology
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case (<Feature:PS51266:8=[CH]> and <Feature:PS51266:10=[CH]> and <Feature:PS51266:28=[CH]> and <Feature:PS51266:31=[CH]>) or (<Feature:PS51266:21=[CH]> and <Feature:PS51266:22=[CH]> and <Feature:PS51266:32=[CH]> and <Feature:PS51266:38=[CH]>) or (<Feature:PS51266:50=[CH]> and <Feature:PS51266:53=[CH]> and <Feature:PS51266:63=[CH]> and <Feature:PS51266:66=[CH]>) | |
GO:0008270; Molecular function:zinc ion binding |
Features
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From: PS51266 | ||||||||||||
Key | From | To | Description | Tag | Condition | FTGroup | ||||||
case <Feature:PS51266:8=[C]> and <Feature:PS51266:10=[H]> and <Feature:PS51266:28=[C]> and <Feature:PS51266:31=[C]> and <Feature:PS51266:21=[C]> and <Feature:PS51266:22=[C]> and <Feature:PS51266:32=[H]> and <Feature:PS51266:38=[H]> and <Feature:PS51266:50=[C]> and <Feature:PS51266:53=[C]> and <Feature:PS51266:63=[C]> and <Feature:PS51266:66=[C]> | ||||||||||||
ZN_FING | from | to | /note="CHY-type #" | |||||||||
else case <Feature:PS51266:8=[CH]> and <Feature:PS51266:10=[CH]> and <Feature:PS51266:28=[CH]> and <Feature:PS51266:31=[CH]> and <Feature:PS51266:21=[CH]> and <Feature:PS51266:22=[CH]> and <Feature:PS51266:32=[CH]> and <Feature:PS51266:38=[CH]> and <Feature:PS51266:50=[CH]> and <Feature:PS51266:53=[CH]> and <Feature:PS51266:63=[CH]> and <Feature:PS51266:66=[CH]> | ||||||||||||
ZN_FING | from | to | /note="CHY-type #; atypical" | |||||||||
else | ||||||||||||
ZN_FING | from | to | /note="CHY-type #; degenerate" | |||||||||
end case | ||||||||||||
BINDING | 8 | 8 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
[CH] | 1 | |||||||
BINDING | 10 | 10 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
[CH] | 1 | |||||||
BINDING | 21 | 21 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2" |
[CH] | 2 | |||||||
BINDING | 22 | 22 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2" |
[CH] | 2 | |||||||
BINDING | 28 | 28 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
[CH] | 1 | |||||||
BINDING | 31 | 31 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
[CH] | 1 | |||||||
BINDING | 32 | 32 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2" |
[CH] | 2 | |||||||
BINDING | 38 | 38 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2" |
[CH] | 2 | |||||||
BINDING | 50 | 50 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#3" |
[CH] | 3 | |||||||
BINDING | 53 | 53 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#3" |
[CH] | 3 | |||||||
BINDING | 63 | 63 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#3" |
[CH] | 3 | |||||||
BINDING | 66 | 66 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#3" |
[CH] | 3 |
Additional information
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Size range | 58-95 amino acids |
Related rules |
None |
Fusion | None |
Repeats | 1 |
Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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- UniProtKB/Swiss-Prot sets
Eukaryota [15] All [ 15 ]
- Retrieve set of proteins with 3D structure for this domain