ProRule PRU00706
General rule information
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Accession | PRU00706 |
Dates | 20-DEC-2023 (Created)
-- (Last updated, Version 1) |
Data class | Domain; |
Predictors |
PROSITE; PS51374; NDPK_LIKE |
Name | Nucleoside diphosphate kinase (NDK)-like domain |
Function | All Nme enzymes possess at least one nucleoside diphosphate kinase (NDK)-like domain of ~150 amino acids. |
Scope(s) |
Bacteria Eukaryota Archaea Viruses Mimivirus bradfordmassiliense |
Example(s) | C3LT09 (NDK_VIBCM); |
Propagated annotation
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Identifier, protein and gene names
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case <FTGroup:1> and <FTTag:act_site> | |
Protein name | + AltName: Full=Nucleoside diphosphate kinase; Short=NDK; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451}; EC=2.7.4.6; |
end case |
Comments
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case <FTGroup:1> and <FTTag:act_site> | |
CATALYTIC ACTIVITY | Reaction=a 2'-deoxyribonucleoside 5'- diphosphate + ATP = a 2'-deoxyribonucleoside 5'-triphosphate + ADP; Xref=Rhea:RHEA:44640, ChEBI:CHEBI:30616, ChEBI:CHEBI:61560, ChEBI:CHEBI:73316, ChEBI:CHEBI:456216; EC=2.7.4.6; |
CATALYTIC ACTIVITY | Reaction=a ribonucleoside 5'-diphosphate + ATP = a ribonucleoside 5'-triphosphate + ADP; Xref=Rhea:RHEA:18113, ChEBI:CHEBI:30616, ChEBI:CHEBI:57930, ChEBI:CHEBI:61557, ChEBI:CHEBI:456216; EC=2.7.4.6; |
COFACTOR | Name=Mg(2+); Xref=ChEBI:CHEBI:18420; |
end case | |
SIMILARITY | Belongs to the NDK family. |
Keywords
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Kinase | |
Transferase | |
Nucleotide-binding | |
ATP-binding | |
Magnesium | |
Metal-binding | |
Nucleotide metabolism | |
Phosphoprotein | |
end case |
Gene Ontology
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GO:0004550; Molecular function:nucleoside diphosphate kinase activity |
GO:0006241; Biological process:CTP biosynthetic process |
GO:0005524; Molecular function:ATP binding |
GO:0006228; Biological process:UTP biosynthetic process |
GO:0006183; Biological process:GTP biosynthetic process |
GO:0016310; Biological process:phosphorylation |
GO:0046872; Molecular function:metal ion binding |
Cross-references
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PROSITE | PS00469; NDPK; 1; |
Features
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From: PS51374 | ||||||||||||
Key | From | To | Description | Tag | Condition | FTGroup | ||||||
DOMAIN | from | to | /note="NDPK-like #" | |||||||||
case <FTGroup:1> | ||||||||||||
ACT_SITE | 114 | 114 | /note="Pros-phosphohistidine intermediate" | act_site | H | |||||||
end case | ||||||||||||
BINDING | 8 | 8 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" |
K | 1 | |||||||
BINDING | 56 | 56 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" |
F | 1 | |||||||
BINDING | 84 | 84 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" |
R | 1 | |||||||
BINDING | 90 | 90 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" |
T | 1 | |||||||
BINDING | 101 | 101 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" |
R | 1 | |||||||
BINDING | 111 | 111 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" |
N | 1 |
Additional information
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Size range | 21-180 amino acids |
Related rules |
None |
Fusion | None |
Repeats | 1-3 |
Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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