We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
ProRule PRU00924
View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU00924
General rule information
[?]
| Accession | PRU00924 |
| Dates | 25-NOV-2011 (Created)
16-JUN-2025 (Last updated, Version 24) |
| Data class | Domain; |
| Predictors |
PROSITE; PS51591; RNA_CAP01_NS5_MT |
Name | mRNA cap 0 and cap 1 methyltransferase (EC 2.1.1.56 and EC 2.1.1.57) |
| Function | mRNA (guanine-N(7))-methyltransferase (EC 2.1.1.56) is an enzyme that transfers a methyl group from SAM to G(5')pppR-RNA to form m(7)G(5')pppR-RNA and SAH. mRNA (nucleoside-2'-O-)-methyltransferase (EC 2.1.1.57) is an enzyme that transfers a methyl group from SAM to m(7)G(5')pppR-RNA to form m(7)G(5')pppRm-RNA and SAH. |
| Scope(s) |
Viruses Flavivirus |
| Example(s) | P12823; P06935; P03314; |
Propagated annotation
[?]
Identifier, protein and gene names
[?]
Comments
[?]
| CATALYTIC ACTIVITY | Reaction=a 5'-end (5'-triphosphoguanosine)-ribonucleoside in mRNA + S- adenosyl-L-methionine = a 5'-end (N(7)-methyl 5'- triphosphoguanosine)-ribonucleoside in mRNA + S-adenosyl-L- homocysteine; Xref=Rhea:RHEA:67008, Rhea:RHEA-COMP:17166, Rhea:RHEA- COMP:17167, ChEBI:CHEBI:57856, ChEBI:CHEBI:59789, ChEBI:CHEBI:156461, ChEBI:CHEBI:167617; EC=2.1.1.56; |
| CATALYTIC ACTIVITY | Reaction=a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-ribonucleoside in mRNA + S-adenosyl-L-methionine = a 5'-end (N(7)-methyl 5'- triphosphoguanosine)-(2'-O-methyl-ribonucleoside) in mRNA + S- adenosyl-L-homocysteine + H(+); Xref=Rhea:RHEA:67020, Rhea:RHEA- COMP:17167, Rhea:RHEA-COMP:17168, ChEBI:CHEBI:15378, ChEBI:CHEBI:57856, ChEBI:CHEBI:59789, ChEBI:CHEBI:156461, ChEBI:CHEBI:167609; EC=2.1.1.57; |
| SIMILARITY | In the N-terminal section; belongs to the class I-like SAM- binding methyltransferase superfamily. mRNA cap 0-1 NS5-type methyltransferase family. |
Keywords
[?]
Gene Ontology
[?]
| GO:0003723; Molecular function:RNA binding |
| GO:0004482; Molecular function:mRNA 5'-cap (guanine-N7-)-methyltransferase activity |
| GO:0004483; Molecular function:methyltransferase cap1 activity |
| GO:0006370; Biological process:7-methylguanosine mRNA capping |
| GO:0032259; Biological process:methylation |
| GO:0046500; Biological process:S-adenosylmethionine metabolic process |
Features
[?]
| From: PS51591 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| DOMAIN | from | to | /note="mRNA cap 0-1 NS5-type MT #" | |||||||||
| BINDING | 56 | 56 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
S | ||||||||
| BINDING | 86 | 86 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
G | ||||||||
| BINDING | 87 | 87 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
W | ||||||||
| BINDING | 104 | 104 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
T | ||||||||
| BINDING | 105 | 105 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
[ILK] | ||||||||
| BINDING | 131 | 131 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
D | ||||||||
| BINDING | 132 | 132 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
[IV] | ||||||||
| BINDING | 147 | 147 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
I | ||||||||
| BINDING | 220 | 220 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
Y | ||||||||
| SITE | 13 | 13 | /note="mRNA cap binding" | K | ||||||||
| SITE | 16 | 16 | /note="mRNA cap binding; via carbonyl oxygen" | L | ||||||||
| SITE | 17 | 17 | /note="mRNA cap binding" | N | ||||||||
| SITE | 19 | 19 | /note="mRNA cap binding; via carbonyl oxygen" | [CLM] | ||||||||
| SITE | 24 | 24 | /note="mRNA cap binding" | F | ||||||||
| SITE | 28 | 28 | /note="mRNA cap binding" | [KR] | ||||||||
| SITE | 61 | 61 | /note="Essential for 2'-O-methyltransferase activity" | K | ||||||||
| SITE | 146 | 146 | /note="Essential for 2'-O-methyltransferase and N-7 methyltransferase activity" | D | ||||||||
| SITE | 150 | 150 | /note="mRNA cap binding" | S | ||||||||
| SITE | 182 | 182 | /note="Essential for 2'-O-methyltransferase activity" | K | ||||||||
| SITE | 213 | 213 | /note="mRNA cap binding" | R | ||||||||
| SITE | 215 | 215 | /note="mRNA cap binding" | S | ||||||||
| SITE | 218 | 218 | /note="Essential for 2'-O-methyltransferase activity" | E | ||||||||
Additional information
[?]
| Size range | unlimited amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 1 |
| Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
[?]
- UniProtKB/Swiss-Prot sets
Viruses [60] All [ 60 ]
- Retrieve set of proteins with 3D structure for this domain