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We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

ProRule PRU00924


View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU00924
General rule information [?]

Accession PRU00924
Dates 25-NOV-2011 (Created)
16-JUN-2025 (Last updated, Version 24)
Data class Domain;
Predictors PROSITE; PS51591; RNA_CAP01_NS5_MT
Name mRNA cap 0 and cap 1 methyltransferase (EC 2.1.1.56 and EC 2.1.1.57)
Function mRNA (guanine-N(7))-methyltransferase (EC 2.1.1.56) is an enzyme that transfers a methyl group from SAM to G(5')pppR-RNA to form m(7)G(5')pppR-RNA and SAH. mRNA (nucleoside-2'-O-)-methyltransferase (EC 2.1.1.57) is an enzyme that transfers a methyl group from SAM to m(7)G(5')pppR-RNA to form m(7)G(5')pppRm-RNA and SAH.
Scope(s) Viruses
Flavivirus
Example(s) P12823; P06935; P03314;

Propagated annotation [?]

Identifier, protein and gene names [?]

Protein name + RecName: EC=2.1.1.56;
                 EC=2.1.1.57;

Comments [?]

CATALYTIC ACTIVITY Reaction=a 5'-end (5'-triphosphoguanosine)-ribonucleoside in mRNA + S- adenosyl-L-methionine = a 5'-end (N(7)-methyl 5'- triphosphoguanosine)-ribonucleoside in mRNA + S-adenosyl-L- homocysteine; Xref=Rhea:RHEA:67008, Rhea:RHEA-COMP:17166, Rhea:RHEA- COMP:17167, ChEBI:CHEBI:57856, ChEBI:CHEBI:59789, ChEBI:CHEBI:156461, ChEBI:CHEBI:167617; EC=2.1.1.56;
CATALYTIC ACTIVITY Reaction=a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-ribonucleoside in mRNA + S-adenosyl-L-methionine = a 5'-end (N(7)-methyl 5'- triphosphoguanosine)-(2'-O-methyl-ribonucleoside) in mRNA + S- adenosyl-L-homocysteine + H(+); Xref=Rhea:RHEA:67020, Rhea:RHEA- COMP:17167, Rhea:RHEA-COMP:17168, ChEBI:CHEBI:15378, ChEBI:CHEBI:57856, ChEBI:CHEBI:59789, ChEBI:CHEBI:156461, ChEBI:CHEBI:167609; EC=2.1.1.57;
SIMILARITYIn the N-terminal section; belongs to the class I-like SAM- binding methyltransferase superfamily. mRNA cap 0-1 NS5-type methyltransferase family.

Keywords [?]


Gene Ontology [?]

GO:0003723; Molecular function:RNA binding
GO:0004482; Molecular function:mRNA 5'-cap (guanine-N7-)-methyltransferase activity
GO:0004483; Molecular function:methyltransferase cap1 activity
GO:0006370; Biological process:7-methylguanosine mRNA capping
GO:0032259; Biological process:methylation
GO:0046500; Biological process:S-adenosylmethionine metabolic process

Features [?]

From: PS51591
Key From To Description Tag Condition FTGroup
DOMAIN from to /note="mRNA cap 0-1 NS5-type MT #"
BINDING 56 56 /ligand="S-adenosyl-L-methionine"
/ligand_id="ChEBI:CHEBI:59789"
S
BINDING 86 86 /ligand="S-adenosyl-L-methionine"
/ligand_id="ChEBI:CHEBI:59789"
G
BINDING 87 87 /ligand="S-adenosyl-L-methionine"
/ligand_id="ChEBI:CHEBI:59789"
W
BINDING 104 104 /ligand="S-adenosyl-L-methionine"
/ligand_id="ChEBI:CHEBI:59789"
T
BINDING 105 105 /ligand="S-adenosyl-L-methionine"
/ligand_id="ChEBI:CHEBI:59789"
[ILK]
BINDING 131 131 /ligand="S-adenosyl-L-methionine"
/ligand_id="ChEBI:CHEBI:59789"
D
BINDING 132 132 /ligand="S-adenosyl-L-methionine"
/ligand_id="ChEBI:CHEBI:59789"
[IV]
BINDING 147 147 /ligand="S-adenosyl-L-methionine"
/ligand_id="ChEBI:CHEBI:59789"
I
BINDING 220 220 /ligand="S-adenosyl-L-methionine"
/ligand_id="ChEBI:CHEBI:59789"
Y
SITE 13 13 /note="mRNA cap binding" K
SITE 16 16 /note="mRNA cap binding; via carbonyl oxygen" L
SITE 17 17 /note="mRNA cap binding" N
SITE 19 19 /note="mRNA cap binding; via carbonyl oxygen" [CLM]
SITE 24 24 /note="mRNA cap binding" F
SITE 28 28 /note="mRNA cap binding" [KR]
SITE 61 61 /note="Essential for 2'-O-methyltransferase activity" K
SITE 146 146 /note="Essential for 2'-O-methyltransferase and N-7 methyltransferase activity" D
SITE 150 150 /note="mRNA cap binding" S
SITE 182 182 /note="Essential for 2'-O-methyltransferase activity" K
SITE 213 213 /note="mRNA cap binding" R
SITE 215 215 /note="mRNA cap binding" S
SITE 218 218 /note="Essential for 2'-O-methyltransferase activity" E

Additional information [?]

Size range unlimited amino acids
Related rules None
Fusion None
Repeats 1
Topology Undefined

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.

UniProtKB rule member sequences [?]