ProRule PRU01101
General rule information
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| PURL | https://purl.expasy.org/prosite/rule/PRU01101 |
| Accession | PRU01101 |
| Dates | 22-JUL-2015 (Created)
19-NOV-2022 (Last updated, Version 6) |
| Data class | Domain; |
| Predictors |
PROSITE; PS51765; ZF_RAG1 |
Name | Zinc finger RAG1-type |
| Function | The dimerization domain of RAG1 proteins consists of a zinc C3HC4 RING finger and a C2H2 zinc RAG1-type finger. |
| Scope(s) |
Eukaryota Euteleostomi |
| Example(s) | Q91829 (RAG1_XENLA); |
Propagated annotation
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Keywords
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| Metal-binding | |
| Zinc | |
| end case | |
| Zinc-finger | |
Gene Ontology
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| GO:0042803; Molecular function:protein homodimerization activity | |
| case <Feature:PS51765:5=[CH]> and <Feature:PS51765:10=[CH]> and <Feature:PS51765:22=[CH]> and <Feature:PS51765:26=[CH]> | |
| GO:0008270; Molecular function:zinc ion binding | |
| GO:0046872; Molecular function:metal ion binding | |
Features
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| From: PS51765 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| case <Feature:PS51765:5=[C]> and <Feature:PS51765:10=[C]> and <Feature:PS51765:22=[H]> and <Feature:PS51765:26=[H]> | ||||||||||||
| ZN_FING | from | to | /note="RAG1-type #" | |||||||||
| else case <Feature:PS51765:5=[CH]> and <Feature:PS51765:10=[CH]> and <Feature:PS51765:22=[CH]> and <Feature:PS51765:26=[CH]> | ||||||||||||
| ZN_FING | from | to | /note="RAG1-type #; atypical" | |||||||||
| else | ||||||||||||
| ZN_FING | from | to | /note="RAG1-type #; degenerate" | |||||||||
| end case | ||||||||||||
| BINDING | 5 | 5 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
[CH] | ||||||||
| BINDING | 10 | 10 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
[CH] | ||||||||
| BINDING | 22 | 22 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
[CH] | ||||||||
| BINDING | 26 | 26 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
[CH] | ||||||||
Additional information
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| Size range | 20-40 amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 1 |
| Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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- UniProtKB/Swiss-Prot sets
Eukaryota [8] All [ 8 ]
- Retrieve set of proteins with 3D structure for this domain