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annotation rule: PRU01101

General rule information [?]

Accession PRU01101
Dates 22-JUL-2015 (Created)
22-NOV-2019 (Last updated, Version 4)
Data class Domain
Predictors PROSITE; PS51765; ZF_RAG1
Name Zinc finger RAG1-type
Function The dimerization domain of RAG1 proteins consists of a zinc C3HC4 RING finger and a C2H2 zinc RAG1-type finger.

Propagated annotation [?]


Gene Ontology [?]

GO:0042803; Molecular function: protein homodimerization activity.
case <Feature:PS51765:5=[CH]> and <Feature:PS51765:10=[CH]> and <Feature:PS51765:22=[CH]> and <Feature:PS51765:26=[CH]>
GO:0008270; Molecular function: zinc ion binding.
GO:0046872; Molecular function: metal ion binding.

Keywords [?]

Metal-binding
Zinc
end case

Zinc-finger

Features [?]

case <Feature:PS51765:5=[C]> and <Feature:PS51765:10=[C]> and <Feature:PS51765:22=[H]> and <Feature:PS51765:26=[H]>
From: PS51765
Key     From     To       Description   Tag   Condition   FTGroup
ZN_FING     from     to       RAG1-type #        
else case <Feature:PS51765:5=[CH]> and <Feature:PS51765:10=[CH]> and <Feature:PS51765:22=[CH]> and <Feature:PS51765:26=[CH]>
ZN_FING     from     to       RAG1-type #; atypical        
else
ZN_FING     from     to       RAG1-type #; degenerate        
end case

METAL     5     5       Zinc #1     [CH]  
METAL     10     10       Zinc #1     [CH]  
METAL     22     22       Zinc #1     [CH]  
METAL     26     26       Zinc #1     [CH]  

Additional information [?]

Size range 20-40 amino acids
Related rules None
Repeats 1
Topology Undefined
Example Q91829 (RAG1_XENLA)
Scope
Eukaryota; Euteleostomi
Comments None

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.


View rule in raw text format (no links)


UniProtKB rule member sequences [?]