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ProRule PRU01143


General rule information [?]

Accession PRU01143
Dates 14-JUN-2016 (Created)
19-NOV-2022 (Last updated, Version 6)
Data class Domain;
Predictors PROSITE; PS51802; ZF_CCHHC
Name Zinc finger CCHHC-type
Function The CCHHC-type zinc finger is able to bind specific double-stranded DNA sequences.
Scope(s) Eukaryota
Euteleostomi
Example(s) Q8CFC2 (MYT1_MOUSE);

Propagated annotation [?]

Keywords [?]

Metal-binding
Zinc
end case
Zinc-finger

Gene Ontology [?]

case <Feature:PS51802:10=[CH]> and <Feature:PS51802:15=[CH]> and <Feature:PS51802:28=[CH]> and <Feature:PS51802:34=[CH]>
GO:0046872; Molecular function:metal ion binding

Features [?]

From: PS51802
Key From To Description Tag Condition FTGroup
case <Feature:PS51802:10=C> and <Feature:PS51802:15=C> and <Feature:PS51802:28=H> and <Feature:PS51802:34=C>
ZN_FING from to /note="CCHHC-type #"
else case <Feature:PS51802:10=[CH]> and <Feature:PS51802:15=[CH]> and <Feature:PS51802:28=[CH]> and <Feature:PS51802:34=[CH]>
ZN_FING from to /note="CCHHC-type #; atypical"
else
ZN_FING from to /note="CCHHC-type #; degenerate"
end case
BINDING 10 10 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 15 15 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 28 28 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 34 34 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1

Additional information [?]

Size range 34-55 amino acids
Related rules None
Fusion None
Repeats 1-7
Topology Undefined

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.



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UniProtKB rule member sequences [?]