Home  |  Contact
annotation rule: PRU01145

General rule information [?]

Accession PRU01145
Dates 27-JUN-2016 (Created)
22-MAR-2021 (Last updated, Version 4)
Data class Domain
Predictors PROSITE; PS51804; ZF_C2HC_LYAR
Name Zinc finger C2HC LYAR-type
Function Ly-1 antibody reactive clone (Lyar), which is known to be expressed abundantly in the testis, encodes a nucleolar protein that contain a LYAR- type C2HC zinc finger motif and three nuclear localization signals.

Propagated annotation [?]


Gene Ontology [?]

case <Feature:PS51804:6=[CH]> and <Feature:PS51804:9=[CH]> and <Feature:PS51804:21=[CH]> and <Feature:PS51804:25=[CH]>
GO:0008270; Molecular function: zinc ion binding.
GO:0046872; Molecular function: metal ion binding.

Keywords [?]

Metal-binding
Zinc
Zinc-finger
end case


Features [?]

case <Feature:PS51804:6=C> and <Feature:PS51804:9=C> and <Feature:PS51804:21=H> and <Feature:PS51804:25=C>
From: PS51804
Key     From     To       Description   Tag   Condition   FTGroup
ZN_FING     from     to       C2HC LYAR-type #        
else case <Feature:PS51804:6=[CH]> and <Feature:PS51804:9=[CH]> and <Feature:PS51804:21=[CH]> and <Feature:PS51804:25=[CH]>
ZN_FING     from     to       C2HC LYAR-type #; atypical        
else
ZN_FING     from     to       C2HC LYAR-type #; degenerate        
end case

METAL     6     6       Zinc #1     [CH]   1
METAL     9     9       Zinc #1     [CH]   1
METAL     21     21       Zinc #1     [CH]   1
METAL     25     25       Zinc #1     [CH]   1

Additional information [?]

Size range 15-36 amino acids
Related rules None
Repeats 2
Topology Undefined
Example O94311 (YH56_SCHPO)
Scope
Eukaryota
Comments None

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.


View rule in raw text format (no links)


UniProtKB rule member sequences [?]