PROSITE logo

ProRule PRU01145


View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU01145
General rule information [?]

Accession PRU01145
Dates 27-JUN-2016 (Created)
19-NOV-2022 (Last updated, Version 8)
Data class Domain;
Predictors PROSITE; PS51804; ZF_C2HC_LYAR
Name Zinc finger C2HC LYAR-type
Function Ly-1 antibody reactive clone (Lyar), which is known to be expressed abundantly in the testis, encodes a nucleolar protein that contain a LYAR- type C2HC zinc finger motif and three nuclear localization signals.
Scope(s) Eukaryota
Example(s) O94311 (YH56_SCHPO);

Propagated annotation [?]

Keywords [?]

Metal-binding
Zinc
end case
Zinc-finger

Gene Ontology [?]

case <Feature:PS51804:6=[CH]> and <Feature:PS51804:9=[CH]> and <Feature:PS51804:21=[CH]> and <Feature:PS51804:25=[CH]>
GO:0008270; Molecular function:zinc ion binding
GO:0046872; Molecular function:metal ion binding

Features [?]

From: PS51804
Key From To Description Tag Condition FTGroup
case <Feature:PS51804:6=C> and <Feature:PS51804:9=C> and <Feature:PS51804:21=H> and <Feature:PS51804:25=C>
ZN_FING from to /note="C2HC LYAR-type #"
else case <Feature:PS51804:6=[CH]> and <Feature:PS51804:9=[CH]> and <Feature:PS51804:21=[CH]> and <Feature:PS51804:25=[CH]>
ZN_FING from to /note="C2HC LYAR-type #; atypical"
else
ZN_FING from to /note="C2HC LYAR-type #; degenerate"
end case
BINDING 6 6 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 9 9 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 21 21 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 25 25 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1

Additional information [?]

Size range 15-36 amino acids
Related rules None
Fusion None
Repeats 2
Topology Undefined

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.

UniProtKB rule member sequences [?]