ProRule PRU01220
General rule information
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Accession | PRU01220 |
Dates | 24-AUG-2018 (Created)
19-NOV-2022 (Last updated, Version 5) |
Data class | Domain; |
Predictors |
PROSITE; PS51872; ZF_ZBR |
Name | Zinc finger ZBR-type |
Function | The ZBR-type zinc finger is an autonomously folded domain with a central, twisted, four-stranded beta-sheet and two zinc ions on opposite ends of the sheet. |
Scope(s) |
Eukaryota Euteleostomi |
Example(s) | Q66H04 (FBX43_RAT); |
Propagated annotation
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Keywords
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Metal-binding | |
Zinc | |
end case | |
Zinc-finger |
Gene Ontology
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case (<Feature:PS51872:5=[CH]> and <Feature:PS51872:8=[CH]> and <Feature:PS51872:23=[CH]> and <Feature:PS51872:28=[CH]>) or (<Feature:PS51872:33=[CH]> and <Feature:PS51872:36=[CH]> and <Feature:PS51872:41=[CH]> and <Feature:PS51872:46=[CH]>) | |
GO:0046872; Molecular function:metal ion binding |
Features
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From: PS51872 | ||||||||||||
Key | From | To | Description | Tag | Condition | FTGroup | ||||||
case (<Feature:PS51872:5=[C]> and <Feature:PS51872:8=[C]> and <Feature:PS51872:23=[C]> and <Feature:PS51872:28=[C]>) and (<Feature:PS51872:33=[C]> and <Feature:PS51872:36=[C]> and <Feature:PS51872:41=[H]> and <Feature:PS51872:46=[C]>) | ||||||||||||
ZN_FING | from | to | /note="ZBR-type #" | |||||||||
else case (<Feature:PS51872:5=[CH]> and <Feature:PS51872:8=[CH]> and <Feature:PS51872:23=[CH]> and <Feature:PS51872:28=[CH]>) and (<Feature:PS51872:33=[CH]> and <Feature:PS51872:36=[CH]> and <Feature:PS51872:41=[CH]> and <Feature:PS51872:46=[CH]>) | ||||||||||||
ZN_FING | from | to | /note="ZBR-type #; atypical" | |||||||||
else | ||||||||||||
ZN_FING | from | to | /note="ZBR-type #; degenerate" | |||||||||
end case | ||||||||||||
BINDING | 5 | 5 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
[CH] | 1 | |||||||
BINDING | 8 | 8 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
[CH] | 1 | |||||||
BINDING | 23 | 23 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
[CH] | 1 | |||||||
BINDING | 28 | 28 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
[CH] | 1 | |||||||
BINDING | 33 | 33 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2" |
[CH] | 2 | |||||||
BINDING | 36 | 36 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2" |
[CH] | 2 | |||||||
BINDING | 41 | 41 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2" |
[CH] | 2 | |||||||
BINDING | 46 | 46 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#2" |
[CH] | 2 |
Additional information
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Size range | 45-55 amino acids |
Related rules |
None |
Fusion | None |
Repeats | 1 |
Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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- UniProtKB/Swiss-Prot sets
Eukaryota [10] All [ 10 ]
- Retrieve set of proteins with 3D structure for this domain