We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
ProRule PRU01236
View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU01236
General rule information
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| Accession | PRU01236 |
| Dates | 28-MAR-2019 (Created)
22-NOV-2019 (Last updated, Version 4) |
| Data class | Domain; |
| Predictors |
PROSITE; PS51888; CLIP |
Name | Clip domain |
| Function | Although the functions of clip domains are not completely clear, the clip domain in arthropods has been demonstrated to act in the regulation of proteinase activity, protein-protein interaction and bactericidal activities. |
| Scope(s) |
Eukaryota Arthropoda |
| Example(s) | Q9VB68; |
Propagated annotation
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Comments
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| DOMAIN | The clip domain consists of 35-55 residues which are 'knitted' together usually by 3 conserved disulfide bonds forming a clip-like compact structure. |
| SIMILARITY | Belongs to the peptidase S1 family. CLIP subfamily. |
Keywords
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| case <FTTag:disulf> | |
| Disulfide bond | |
| end case | |
Features
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| From: PS51888 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| DOMAIN | from | to | /note="Clip #" | |||||||||
| DISULFID | 2 | 52 | disulf | C-x*-C | ||||||||
| DISULFID | 12 | 42 | disulf | C-x*-C | ||||||||
| DISULFID | 18 | 53 | disulf | C-x*-C | ||||||||
Additional information
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| Size range | 40-65 amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 1 |
| Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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- UniProtKB/Swiss-Prot sets
Eukaryota [27] All [ 27 ]
- Retrieve set of proteins with 3D structure for this domain