We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
ProRule PRU01362
View rule in raw text format (no links)
PURL: https://purl.expasy.org/prosite/rule/PRU01362
General rule information
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| Accession | PRU01362 |
| Dates | 21-FEB-2023 (Created)
03-SEP-2024 (Last updated, Version 3) |
| Data class | Domain; |
| Predictors |
PROSITE; PS52018; DART |
Name | DNA ADP-ribosyl transferase (DarT) domain |
| Function | The bacterial DNA ADP-ribosyl transferase (DarT) protein is a toxin that has been shown to transfer ADP-ribose from NAD(+) onto thymidine bases present in single-stranded DNA (ssDNA) specifically at the four-base motif TNTC, and to have no activity on RNA or protein targets. |
| Scope(s) |
Bacteria |
| Example(s) | A0A0B0SG80; |
Propagated annotation
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Comments
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| case <FTGroup:1> | |
| CATALYTIC ACTIVITY | Reaction=a thymidine in DNA + NAD(+) = an N-(ADP-alpha-D-ribosyl)- thymidine in DNA + nicotinamide + H(+); Xref=Rhea:RHEA:71651, Rhea:RHEA-COMP:13556, Rhea:RHEA-COMP:18051, ChEBI:CHEBI:15378, ChEBI:CHEBI:17154, ChEBI:CHEBI:57540, ChEBI:CHEBI:137386, ChEBI:CHEBI:191199; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:71652; |
| end case | |
| SIMILARITY | Belongs to the DarT ADP-ribosyltransferase family. |
Keywords
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Gene Ontology
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| GO:0003677; Molecular function:DNA binding | |
| case <FTGroup:1> | |
| GO:0016779; Molecular function:nucleotidyltransferase activity | |
| GO:0016757; Molecular function:glycosyltransferase activity | |
Features
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| From: PS52018 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| DOMAIN | from | to | /note="DarT" | |||||||||
| BINDING | 5 | 7 | /ligand="NAD(+)" /ligand_id="ChEBI:CHEBI:57540" |
1 | ||||||||
| case <FTGroup:1> | ||||||||||||
| BINDING | 14 | 14 | /ligand="NAD(+)" /ligand_id="ChEBI:CHEBI:57540" |
G | ||||||||
| BINDING | 22 | 22 | /ligand="NAD(+)" /ligand_id="ChEBI:CHEBI:57540" |
L | ||||||||
| end case | ||||||||||||
| ACT_SITE | 44 | 44 | /note="Proton acceptor" | R | 1 | |||||||
| BINDING | 44 | 44 | /ligand="NAD(+)" /ligand_id="ChEBI:CHEBI:57540" |
1 | ||||||||
| ACT_SITE | 141 | 141 | E | 1 | ||||||||
Additional information
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| Size range | 192-205 amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 1 |
| Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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- UniProtKB/Swiss-Prot sets
Bacteria [6] All [ 6 ]
- Retrieve set of proteins with 3D structure for this domain