ProRule PRU10145
General rule information
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| Accession | PRU10145 |
| Dates | 9-FEB-2024 (Created)
9-FEB-2024 (Last updated, Version 3) |
| Data class | Domain; |
| Predictors |
PROSITE; PS01030; RNA_POL_M_15KD |
Name | RNA polymerases M / 15 Kd subunits |
| Function | These proteins contain a probable zinc finger in their N-terminal region. |
| Scope(s) |
Eukaryota Archaea |
| Example(s) | Q07271 (TFS_SULAC); |
Propagated annotation
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Comments
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| SIMILARITY | Belongs to the archaeal RpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. |
Keywords
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| Metal-binding | |
| Zinc | |
| end case | |
| Transcription | |
| DNA-directed RNA polymerase | |
| case <OC:Eukaryota> | |
| Nucleus | |
| end case | |
Gene Ontology
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| GO:0003899; Molecular function:DNA-directed 5'-3' RNA polymerase activity | |
| GO:0003676; Molecular function:nucleic acid binding | |
| case <FTGroup:1> | |
| GO:0008270; Molecular function:zinc ion binding | |
Features
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| From: PS01030 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| BINDING | 2 | 2 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
C | 1 | |||||||
| BINDING | 5 | 5 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
C | 1 | |||||||
| BINDING | 10 | 10 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
C | 1 | |||||||
| BINDING | 11 | 11 | /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="#1" |
C | 1 | |||||||
Additional information
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| Size range | 20-27 amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 1 |
| Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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- UniProtKB/Swiss-Prot sets
Archaea [9] Eukaryota [26] All [ 35 ]
- Retrieve set of proteins with 3D structure for this domain