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ProRule PRU00453


General rule information [?]

Accession PRU00453
Dates 28-JUN-2005 (Created)
19-NOV-2022 (Last updated, Version 9)
Data class Domain;
Predictors PROSITE; PS51083; ZF_HIT
Name Zinc finger HIT-type
Function Undefined
Scope(s) Eukaryota
Example(s) P38772 (BCD1_YEAST);

Propagated annotation [?]

Keywords [?]

Zinc-finger
case (<Feature:PS51083:1=[CH]> and <Feature:PS51083:4=[CH]> and <Feature:PS51083:21=[CH]> and <Feature:PS51083:25=[CH]>) or (<Feature:PS51083:13=[CH]> and <Feature:PS51083:16=[CH]> and <Feature:PS51083:29=[CH]> and <Feature:PS51083:34=[CH]>)
Zinc
Metal-binding
end case

Gene Ontology [?]

GO:0008270; Molecular function:zinc ion binding

Features [?]

From: PS51083
Key From To Description Tag Condition FTGroup
case (<Feature:PS51083:1=C> and <Feature:PS51083:4=C> and <Feature:PS51083:21=C> and <Feature:PS51083:25=C>) and (<Feature:PS51083:13=C> and <Feature:PS51083:16=C> and <Feature:PS51083:29=H> and <Feature:PS51083:34=C>)
ZN_FING from to /note="HIT-type #"
else case (<Feature:PS51083:1=[CH]> and <Feature:PS51083:4=[CH]> and <Feature:PS51083:21=[CH]> and <Feature:PS51083:25=[CH]>) and (<Feature:PS51083:13=[CH]> and <Feature:PS51083:16=[CH]> and <Feature:PS51083:29=[CH]> and <Feature:PS51083:34=[CH]>)
ZN_FING from to /note="HIT-type #; atypical"
else
ZN_FING from to /note="HIT-type #; degenerate"
end case
BINDING 1 1 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 4 4 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 13 13 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#2"		 [CH] 2
BINDING 16 16 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#2"		 [CH] 2
BINDING 21 21 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 25 25 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#1"		 [CH] 1
BINDING 29 29 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#2"		 [CH] 2
BINDING 34 34 /ligand="Zn(2+)"
/ligand_id="ChEBI:CHEBI:29105"
/ligand_label="#2"		 [CH] 2

Additional information [?]

Size range 26-40 amino acids
Related rules None
Fusion None
Repeats 1
Topology Undefined

Copyright

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.



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UniProtKB rule member sequences [?]