PROSITE documentation PDOC00153

Delta-aminolevulinic acid dehydratase active site

Description

Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) (ALAD) [1] catalyzes the second step in the biosynthesis of heme, the condensation of two molecules of 5-aminolevulinate to form porphobilinogen. The enzyme is an oligomer composed of eight identical subunits. Each of the subunits binds an atom of zinc or of magnesium (in plants). A lysine has been implicated in the catalytic mechanism [2]. The sequence of the region in the vicinity of the active site residue is conserved in ALAD from various prokaryotic and eukaryotic species.

Last update:

November 1995 / Pattern and text revised.

Technical section

PROSITE method (with tools and information) covered by this documentation:

D_ALA_DEHYDRATASE, PS00169Delta-aminolevulinic acid dehydratase active site  (PATTERN)
Consensus pattern: G-x-D-x-[LIVM](2)-[IV]-K-P-[GSA]-x(2)-Y
K is the active site residue
Sequences known to belong to this class detected by the pattern: ALL
Other sequence(s) detected in Swiss-Prot: NONE
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Matching PDB structures: 1AW5 1B4E 1B4K 1E51 ... [ALL]

References

1 Authors Li J.-M., Russell C.S., Cosloy S.D.
Title The structure of the Escherichia coli hemB gene.
Source Gene 75:177-184(1989).
PubMed ID 2656410
2 Authors Gibbs P.N.B., Jordan P.M.
Title Identification of lysine at the active site of human 5-aminolaevulinate dehydratase.
Source Biochem. J. 236:447-451(1986).
PubMed ID 3092810

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