PROSITE documentation PDOC00243

Endothelin family signature

Description

Endothelins (ET's) are a family of potent mammalian vasoconstrictor peptides [1,2,3]. Sarafotoxins (SRTX) and bibrotoxin (BTX) are cardiotoxins from the venom of snakes of the Atractaspis family, structurally and functionally [4,5] similar to endothelin. The peptides currently known to belonging to the ET/SRTX family are:

  • Endothelin 1 (ET-1).
  • Endothelin 2 (ET-2) which is also known in mouse as Vasoactive Intestinal Contractor (VIC).
  • Endothelin 3 (ET-3).
  • Sarafotoxins SRTX-A, -B, -C and -D from Atractaspis engaddensis.
  • Bibrotoxin (BTX) from Atractaspis bibroni.

As shown in the following schematic representation, these peptides which are 21 residues long contain two intramolecular disulfide bonds.

                        +-------------+
                        |             |
                        CxCxxxxxxxCxxxCxxxxxx
                          |       |
                          +-------+
'C': conserved cysteine involved in a disulfide bond.

As a signature pattern for this family of proteins, we have taken the conserved residues in the disulfide loops region.

Note:

In addition to endothelin, the precursors of ETs contain an endothelin- like domain which is also detected by this pattern.

Note:

The precursor of sarafotoxins is a large protein that contains 12 copies of various isoforms of the toxin [6].

Last update:

May 2004 / Text revised.

Technical section

PROSITE method (with tools and information) covered by this documentation:

ENDOTHELIN, PS00270Endothelin family signature  (PATTERN)
Consensus pattern: C-x-C-x(4)-D-x(2)-C-x(2)-[FY]-C
The 4 C's are involved in disulfide bonds
Sequences known to belong to this class detected by the pattern: ALL
Other sequence(s) detected in Swiss-Prot: NONE.
• Retrieve an alignment of Swiss-Prot true positive hits:
  Clustal format, color, condensed view  / Clustal format, color  / Clustal format, plain text  / Fasta format
Retrieve the sequence logo from the alignment
Taxonomic tree view of all Swiss-Prot/TrEMBL entries matching PS00270
Retrieve a list of all Swiss-Prot/TrEMBL entries matching PS00270
Scan Swiss-Prot/TrEMBL entries against PS00270
view ligand binding statistics
Matching PDB structures: 1EDN 1EDP 1SRB 1T7H ... [ALL]

References

1 Authors Yanagisawa M., Masaki T.
Title Molecular biology and biochemistry of the endothelins.
Source Trends Pharmacol. Sci. 10:374-378(1989).
PubMed ID 2690429
2 Authors Simonson M.S., Dunn M.J.
Title Cellular signaling by peptides of the endothelin gene family.
Source FASEB J. 4:2989-3000(1990).
PubMed ID 2168326
3 Authors Rubanyi G.M., Parker Botelho L.H.
Title Endothelins.
Source FASEB J. 5:2713-2720(1991).
PubMed ID 1916094
4 Authors Kloog Y., Sokolovsky M.
Title Similarities in mode and sites of action of sarafotoxins and endothelins.
Source Trends Pharmacol. Sci. 10:212-214(1989).
PubMed ID 2549664
5 Authors Sokolovsky M.
Title Endothelins and sarafotoxins: physiological regulation, receptor subtypes and transmembrane signaling.
Source Trends Biochem. Sci. 16:261-264(1991).
PubMed ID 1656557
6 Authors Ducancel F., Matre V., Dupont C., Lajeunesse E., Wollberg Z., Bdolah A., Kochva E., Boulain J.C.C., Menez A.
Title Cloning and sequence analysis of cDNAs encoding precursors of sarafotoxins. Evidence for an unusual 'rosary-type' organization.
Source J. Biol. Chem. 268:3052-3055(1993).
PubMed ID 8428983

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