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PROSITE documentation PDOC00458

Ribosomal protein S24e signature

Description:

A number of eukaryotic and archaebacterial ribosomal proteins can be grouped on the basis of sequence similarities. One of these families consists of:

  • Vertebrate S24 [1].
  • Yeast Rp50.
  • Mucor racemosus S24 [2].
  • Plant S24.
  • Archebacterial S24e.

These proteins have 91 to 148 amino acids. As a signature pattern, we selected a well conserved stretch in the central part of these proteins.

Last update:

April 2006 / Pattern revised.

Technical section:

PROSITE method (with tools and information) covered by this documentation:

RIBOSOMAL_S24E, PS00529; Ribosomal protein S24e signature  (PATTERN)
Consensus pattern: [FYAT]-G-x(2)-[KREILYV]-[STAI]-x-[GCAVI]-[FYKRE]-[GTALV]-x-[LIVYA]-Y-[DENQAKY]-[STDN]-x(7)-E
Sequences known to belong to this class detected by the pattern: ALL
Other sequence(s) detected in Swiss-Prot: NONE
• Retrieve an alignment of Swiss-Prot true positive hits:
  Clustal format, color, condensed view  / Clustal format, color  / Clustal format, plain text  / Fasta format
• Retrieve the sequence logo from the alignment
• Taxonomic tree view of all Swiss-Prot/TrEMBL entries matching PS00529
• Retrieve a list of all Swiss-Prot/TrEMBL entries matching PS00529
• Scan Swiss-Prot/TrEMBL entries against PS00529
• view ligand binding statistics
Matching PDB structures: 1XN9 1YWX 2G1D 2V94 ... [ALL]

References:

1 AuthorsBrown S.J., Jewell A., Maki C.G., Roufa D.J.
TitleA cDNA encoding human ribosomal protein S24.
SourceGene 91:293-296(1990).
PubMed ID2210388
2 AuthorsSosa L., Fonzi W.A., Sypherd P.S.
TitleStructure of a ribosomal protein gene in Mucor racemosus.
SourceNucleic Acids Res. 17:9319-9331(1989).
PubMed ID2685758

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