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| PROSITE documentation PDOC00502 |
Ribosomal protein L32e signature
Description:
A number of eukaryotic and archaebacterial ribosomal proteins can be grouped
on the basis of sequence similarities. One of these families consists of:
- Mammalian L32 [1].
- Drosophila RP49 [2].
- Trichoderma harzianum L32 [3].
- Yeast L32e (YBL092w).
- Archaebacterial L32e [4].
These proteins have 135 to 240 amino-acid residues. As a signature pattern, we
selected a stretch of about 20 residues located in the N-terminal part of
these proteins.
Last update:
December 2004 / Pattern and text revised.
Technical section:
PROSITE method (with tools and information) covered by this documentation:
| RIBOSOMAL_L32E, PS00580; Ribosomal protein L32e signature (PATTERN) |
| Consensus pattern: |
F-x-R-x(4)-[KRL]-x(2)-[KRT]-[LIVMFT]-x(3,5)-W-R-[KR]-x(2)-G
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| Sequences known to belong to this class detected by the pattern: |
ALL |
| Other sequence(s) detected in Swiss-Prot: |
NONE |
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| Matching PDB structures:
1FFK 1JJ2 1K5Y 1K73 ... [ALL] |
References:
| 1 |
Authors | Jacks C.M., Powaser C.B., Hackett P.B. |
| Title | Sequence analysis of a processed gene coding for mouse ribosomal protein L32. |
| Source | Gene 74:565-570(1988). |
| PubMed ID | 3246356 |
| 2 |
Authors | Aguade M. |
| Title | Nucleotide sequence comparison of the rp49 gene region between Drosophila subobscura and D. melanogaster. |
| Source | Mol. Biol. Evol. 5:433-441(1988). |
| PubMed ID | 3136296 |
| 3 |
Authors | Lora J.M., Garcia I., Benitez T., Llobell A., Pintor-Toro J.A. |
| Title | Primary structure of Trichoderma harzianum ribosomal protein L32. |
| Source | Nucleic Acids Res. 21:3319-3319(1993). |
| PubMed ID | 8341606 |
| 4 |
Authors | Arndt E., Scholzen T., Kroemer W., Hatakeyama T., Kimura M. |
| Title | Primary structures of ribosomal proteins from the archaebacterium Halobacterium marismortui and the eubacterium Bacillus stearothermophilus. |
| Source | Biochimie 73:657-668(1991). |
| PubMed ID | 1764513 |
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