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| PROSITE documentation PDOC00741 |
Transaldolase signatures
Description:
Transaldolase (EC 2.2.1.2) catalyzes the reversible transfer of a three-carbon
ketol unit from sedoheptulose 7-phosphate to glyceraldehyde 3-phosphate to
form erythrose 4-phosphate and fructose 6-phosphate. This enzyme, together
with transketolase, provides a link between the glycolytic and pentose-phosphate pathways. Transaldolase is an enzyme of about 34 Kd whose sequence
has been well conserved throughout evolution. A lysine has been implicated [1]
in the catalytic mechanism of the enzyme; it acts as a nucleophilic group that
attacks the carbonyl group of fructose-6-phosphate.
Transaldolase is evolutionary related [2] to a bacterial protein of about 20
Kd (known as talC in Escherichia coli), whose exact function is not yet known.
We developed two signature patterns for these proteins. The first, located in
the N-terminal section, contains a perfectly conserved pentapeptide; the
second, includes the active site lysine.
Last update:
December 2004 / Patterns and text revised.
Technical section:
PROSITE methods (with tools and information) covered by this documentation:
| TRANSALDOLASE_1, PS01054; Transaldolase signature 1 (PATTERN) |
| Consensus pattern: |
[DGH]-[IVSAC]-T-[ST]-N-P-[STA]-[LIVMF](2)
|
| Sequences known to belong to this class detected by the pattern: |
ALL |
| Other sequence(s) detected in Swiss-Prot: |
1. |
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| Matching PDB structures:
1F05 1I2O 1I2P 1I2Q ... [ALL] |
| TRANSALDOLASE_2, PS00958; Transaldolase active site (PATTERN) |
| Consensus pattern: |
[LIVMA]-x-[LIVM]-K-[LIVM]-[PAS]-x-[STC]-x-[DENQPAS]-[GC]-[LIVM]-x-[AGV]-x(0,1)-[QEKRSTH]-x-[LIVMF]
K is the active site residue |
| Sequences known to belong to this class detected by the pattern: |
ALL |
| Other sequence(s) detected in Swiss-Prot: |
NONE. |
|
|
|
| Matching PDB structures:
1F05 1I2N 1I2O 1I2P ... [ALL] |
References:
| 1 |
Authors | Miosga T., Schaaff-Gerstenschlaeger I., Franken E., Zimmermann F.K. |
| Title | Lysine144 is essential for the catalytic activity of Saccharomyces cerevisiae transaldolase. |
| Source | Yeast 9:1241-1249(1993). |
| PubMed ID | 8109173 |
| 2 |
Authors | Reizer J., Reizer A., Saier M.H. Jr. |
| Title | Novel phosphotransferase system genes revealed by bacterial genome analysis -- a gene cluster encoding a unique Enzyme I and the proteins of a fructose-like permease system. |
| Source | Microbiology 141:961-971(1995). |
| PubMed ID | 7773398 |
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