Entry: PS00011

General information about the entry
Entry name GLA_1
Accession number PS00011
Entry type PATTERN
Date APR-1990 (CREATED); MAY-2005 (DATA UPDATE); APR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00011
Name and characterization of the entry
DescriptionVitamin K-dependent carboxylation domain.
Pattern E-x(2)-[ERK]-E-x-C-x(6)-[EDR]-x(10,11)-[FYA]-[YW].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_06, total number of sequence entries in that release: 540261.
  • Total number of hits in UniProtKB/Swiss-Prot: 115 hits in 115 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 113 hits in 113 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 2 hits in 2 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 6
  • Precision (true hits / (true hits + false positives)): 98.26 %
  • Recall (true hits / (true hits + false negatives)): 99.12 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
FA101_PSETE (Q1L659), FA102_PSETE (Q1L658), FA10_BOVIN  (P00743), 
FA10_CHICK  (P25155), FA10_HUMAN  (P00742), FA10_MOUSE  (O88947), 
FA10_RABIT  (O19045), FA10_RAT    (Q63207), FA10_TROCA  (Q4QXT9), 
FA7_BOVIN   (P22457), FA7_HUMAN   (P08709), FA7_MOUSE   (P70375), 
FA7_PANPA   (Q2F9P4), FA7_PANTR   (Q2F9P2), FA7_RABIT   (P98139), 
FA7_RAT     (Q8K3U6), FA9_BOVIN   (P00741), FA9_CANFA   (P19540), 
FA9_CHICK   (Q804X6), FA9_FELCA   (Q6SA95), FA9_HUMAN   (P00740), 
FA9_MOUSE   (P16294), FA9_PANTR   (Q95ND7), FA9_PIG     (P16293), 
FAXC_OXYMI  (Q58L95), FAXC_OXYSU  (Q58L96), FAXC_PSETE  (Q56VR3), 
FAXD1_DEMVE (A6MFK7), FAXD1_NOTSC (P82807), FAXD2_DEMVE (A6MFK8), 
FAXD2_NOTSC (Q58L94), FAXD_HOPST  (P83370), FAXD_PSEPO  (Q58L93), 
FAXD_RHING  (B5G6G5), FAXD_TROCA  (P81428), GAS6_HUMAN  (Q14393), 
GAS6_MOUSE  (Q61592), GAS6_RAT    (Q63772), MGP_BOVIN   (P07507), 
MGP_CHICK   (O42413), MGP_CHILA   (Q6QN06), MGP_GALGA   (P56620), 
MGP_HUMAN   (P08493), MGP_MOUSE   (P19788), MGP_PIG     (Q8MJ39), 
MGP_PONAB   (Q5RDP6), MGP_RABIT   (P47841), MGP_RAT     (P08494), 
OSTC2_MOUSE (P86547), OSTCN_ARGRE (Q800Y1), OSTCN_ATEGE (A2D4U1), 
OSTCN_BISPR (P83489), OSTCN_BOVIN (P02820), OSTCN_CAMBA (P86314), 
OSTCN_CAMDR (P86313), OSTCN_CANFA (P81455), OSTCN_CAPHI (P0C225), 
OSTCN_CHICK (P02822), OSTCN_CYPCA (Q7LZI4), OSTCN_DANRE (P83238), 
OSTCN_DRONO (P15504), OSTCN_FELCA (P02821), OSTCN_GORGO (P84349), 
OSTCN_HORSE (P83005), OSTCN_HUMAN (P02818), OSTCN_LAMGU (P86315), 
OSTCN_LEPMA (P28317), OSTCN_MACEU (P0C226), OSTCN_MACFA (P02819), 
OSTCN_MACMU (A2D670), OSTCN_MACNE (A2T6K4), OSTCN_MOUSE (P86546), 
OSTCN_PANTR (P84348), OSTCN_PIG   (Q8HYY9), OSTCN_PONPY (P84350), 
OSTCN_RABIT (P39056), OSTCN_RAT   (P04640), OSTCN_SPAAU (P40148), 
OSTCN_XENLA (P40147), OSTCN_XENTR (Q6DJ00), OSTCN_XIPGL (P02823), 
OSTR_MOUSE  (P54615), PROC_BOVIN  (P00745), PROC_CANFA  (Q28278), 
PROC_HUMAN  (P04070), PROC_MOUSE  (P33587), PROC_PIG    (Q9GLP2), 
PROC_RABIT  (Q28661), PROC_RAT    (P31394), PROS_BOVIN  (P07224), 
PROS_HUMAN  (P07225), PROS_MACMU  (Q28520), PROS_MOUSE  (Q08761), 
PROS_RABIT  (P98118), PROS_RAT    (P53813), PROZ_BOVIN  (P00744), 
PROZ_HUMAN  (P22891), PROZ_MOUSE  (Q9CQW3), THRB_BOVIN  (P00735), 
THRB_HUMAN  (P00734), THRB_MOUSE  (P19221), THRB_PIG    (Q19AZ8), 
THRB_PONAB  (Q5R537), THRB_RAT    (P18292), TMG1_BOVIN  (A7Z070), 
TMG1_HUMAN  (O14668), TMG1_PONAB  (Q5RCB6), TMG2_HUMAN  (O14669), 
TMG2_MOUSE  (Q8R182), TMG3_HUMAN  (Q9BZD7), TMG3_MOUSE  (Q6PAQ9), 
TMG4_HUMAN  (Q9BZD6), TMG4_MOUSE  (Q8BGN6)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
MGP_ARGRE   (Q800Y2)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
FAXD_NOTAI  (P0CY52), MGP_PRIGL   (P83347), OSTCN_CAMHE (P86312), 
OSTCN_HALDD (P83473), OSTCN_HOMNE (P84351), THRB_SALSA  (P84122)
False positive hits (sequences which do not belong to the set under consideration):
KAD_BORBU   (O51378), KAD_BORGA   (Q661K1)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1CFH;

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission


If you would like to retrieve all the Swiss-Prot entries referenced in the DR lines of this entry (with the exception of false positive hits) , you can enter a file name. These entries will then be saved to a file under this name. (Please note that this temporary file will only be kept for 1 week.)

File name:

Format: Swiss-Prot Fasta

or