Entry: PS00019

General information about the entry

Entry name [info] ACTININ_1
Accession [info] PS00019
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00019

Name and characterization of the entry

Description [info] Actinin-type actin-binding domain signature 1.
Pattern [info]
[EQ]-{LNYH}-x-[ATV]-[FY]-{LDAM}-{T}-W-{PG}-N.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 113 in 100 different sequences
Number of true positive hits 94 in 81 different sequences
Number of 'unknown' hits 0
Number of false positive hits 19 in 19 different sequences
Number of false negative sequences 5
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 83.19 %
Recall (true positives / (true positives + false negatives)) 94.95 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
81 sequences

ACTN1_BOVIN (Q3B7N2), ACTN1_CHICK (P05094), ACTN1_HUMAN (P12814), 
ACTN1_MACFA (Q2PFV7), ACTN1_MOUSE (Q7TPR4), ACTN1_RAT   (Q9Z1P2), 
ACTN2_BOVIN (Q3ZC55), ACTN2_CHICK (P20111), ACTN2_HUMAN (P35609), 
ACTN2_MOUSE (Q9JI91), ACTN3_BOVIN (Q0III9), ACTN3_HUMAN (Q08043), 
ACTN3_MOUSE (O88990), ACTN4_BOVIN (A5D7D1), ACTN4_CHICK (Q90734), 
ACTN4_HUMAN (O43707), ACTN4_MOUSE (P57780), ACTN4_PONAB (Q5RCS6), 
ACTN4_RAT   (Q9QXQ0), ACTNA_DICDI (P05095), ACTNB_DICDI (O76329), 
ACTN_ANOGA  (Q7PKQ5), ACTN_DROME  (P18091), ANC1_CAEEL  (Q9N4M4), 
CLMN_HUMAN  (Q96JQ2), CLMN_MOUSE  (Q8C5W0), CTXA_DICDI  (Q54HG2), 
CTXA_POLPA  (Q9Y0T4), CTXB_DICDI  (Q550R2), DMDA_DROME  (Q9VDW6), 
DMD_CAEEL   (Q9TW65), DMD_CANFA   (O97592), DMD_CHICK   (P11533), 
DMD_HUMAN   (P11532), DMD_MOUSE   (P11531), DMD_PIG     (Q5GN48), 
DYST_HUMAN  (Q03001), DYST_MOUSE  (Q91ZU6), FIMB_DICDI  (P54680), 
FIMB_SCHPO  (O59945), FIMB_YEAST  (P32599), FLNA_DROME  (Q9VEN1), 
FLNA_HUMAN  (P21333), FLNA_MOUSE  (Q8BTM8), FLNB_HUMAN  (O75369), 
FLNB_MOUSE  (Q80X90), FLNC_HUMAN  (Q14315), FLNC_MOUSE  (Q8VHX6), 
FLNC_RAT    (D3ZHA0), GELA_DICDI  (P13466), MACF1_HUMAN (Q9UPN3), 
MACF1_MOUSE (Q9QXZ0), MACF1_RAT   (D3ZHV2), PLEC_HUMAN  (Q15149), 
PLEC_MOUSE  (Q9QXS1), PLSI_BOVIN  (A6H742), PLSI_CHICK  (P19179), 
PLSI_HUMAN  (Q14651), PLSI_MOUSE  (Q3V0K9), PLSL_DANRE  (Q6P698), 
PLSL_HUMAN  (P13796), PLSL_MOUSE  (Q61233), PLST_BOVIN  (A7E3Q8), 
PLST_CRIGR  (O88818), PLST_HUMAN  (P13797), PLST_MOUSE  (Q99K51), 
PLST_RAT    (Q63598), SPTB1_HUMAN (P11277), SPTB1_MOUSE (P15508), 
SPTB2_HUMAN (Q01082), SPTB2_MOUSE (Q62261), SPTCB_DROME (Q00963), 
SPTN2_HUMAN (O15020), SPTN2_RAT   (Q9QWN8), SPTN4_HUMAN (Q9H254), 
SPTN5_HUMAN (Q9NRC6), SYNE1_HUMAN (Q8NF91), SYNE1_MOUSE (Q6ZWR6), 
SYNE2_HUMAN (Q8WXH0), SYNE2_MOUSE (Q6ZWQ0), UTRO_HUMAN  (P46939)
» More

UniProtKB/Swiss-Prot
False negative sequences
5 sequences

AIN1_SCHPO  (O13728), FIMB1_ARATH (Q7G188), FIMB3_ARATH (Q9FJ70), 
FIMB5_ARATH (Q9FKI0), PLEC_RAT    (P30427)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

DMD_RAT     (P11530), PLEC_CRIGR  (Q9JI55)

		
UniProtKB/Swiss-Prot
False positive sequences
19 sequences

CARDB_CYNCA (Q9XFX4), CATA_MICLU  (P29422), CELA1_HUMAN (Q9UNI1), 
CRF2_ASPFU  (Q4WI46), CSLG1_ARATH (Q570S7), CSLG2_ARATH (Q8VYR4), 
CSLG3_ARATH (Q0WVN5), CYPR1_CYNCA (P40782), FT105_SCHPO (O13776), 
INT1_HUMAN  (Q8N201), INT1_MOUSE  (Q6P4S8), MTMR7_MOUSE (Q9Z2C9), 
OPSB_ASPOR  (Q8NKB6), RDRP_OCSVU  (Q83927), RNA14_SCHPO (O14233), 
SEPF_PEPD6  (Q182V6), STAB2_MOUSE (Q8R4U0), UL07_VZVD   (P09301), 
ZDHC7_DICDI (Q552M6)
» More

PDB
[Detailed view]
28 PDB

1AOA; 1DXX; 1MB8; 1QAG; 1RT8; 1SH5; 1SH6; 1SJJ; 1TJT; 1WKU; 2EYI; 2EYN; 2R0O; 2WA5; 2WA6; 2WA7; 2WFN; 3F7P; 3FER; 3HOC; 3HOP; 3HOR; 3LUE; 4B7L; 4D1E; 4Q57; 4Q58; 4Q59
» More

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