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Entry: PS00019

General information about the entry

Entry name [info] ACTININ_1
Accession [info] PS00019
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-APR-2006 DATA UPDATE; 27-SEP-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00019

Name and characterization of the entry

Description [info] Actinin-type actin-binding domain signature 1.
Pattern [info]
[EQ]-{LNYH}-x-[ATV]-[FY]-{LDAM}-{T}-W-{PG}-N.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_09 which contains 555'594 sequence entries.


Total number of hits 115 in 102 different sequences
Number of true positive hits 96 in 83 different sequences
Number of 'unknown' hits 0
Number of false positive hits 19 in 19 different sequences
Number of false negative sequences 5
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 83.48 %
Recall (true positives / (true positives + false negatives)) 95.05 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
83 sequences

ACTN1_BOVIN (Q3B7N2    ), ACTN1_CHICK (P05094    ), ACTN1_HUMAN (P12814    ), 
ACTN1_MACFA (Q2PFV7    ), ACTN1_MOUSE (Q7TPR4    ), ACTN1_RAT   (Q9Z1P2    ), 
ACTN2_BOVIN (Q3ZC55    ), ACTN2_CHICK (P20111    ), ACTN2_HUMAN (P35609    ), 
ACTN2_MOUSE (Q9JI91    ), ACTN3_BOVIN (Q0III9    ), ACTN3_HUMAN (Q08043    ), 
ACTN3_MOUSE (O88990    ), ACTN4_BOVIN (A5D7D1    ), ACTN4_CHICK (Q90734    ), 
ACTN4_HUMAN (O43707    ), ACTN4_MOUSE (P57780    ), ACTN4_PONAB (Q5RCS6    ), 
ACTN4_RAT   (Q9QXQ0    ), ACTNA_DICDI (P05095    ), ACTNB_DICDI (O76329    ), 
ACTN_ANOGA  (Q7PKQ5    ), ACTN_DERFA  (L7UZ85    ), ACTN_DROME  (P18091    ), 
ANC1_CAEEL  (Q9N4M4    ), CLMN_HUMAN  (Q96JQ2    ), CLMN_MOUSE  (Q8C5W0    ), 
CTXA_DICDI  (Q54HG2    ), CTXA_POLPP  (Q9Y0T4    ), CTXB_DICDI  (Q550R2    ), 
DMDA_DROME  (Q9VDW6    ), DMD_CAEEL   (Q9TW65    ), DMD_CANLF   (O97592    ), 
DMD_CHICK   (P11533    ), DMD_HUMAN   (P11532    ), DMD_MOUSE   (P11531    ), 
DMD_PIG     (Q5GN48    ), DMD_RAT     (P11530    ), DYST_HUMAN  (Q03001    ), 
DYST_MOUSE  (Q91ZU6    ), FIMB_DICDI  (P54680    ), FIMB_SCHPO  (O59945    ), 
FIMB_YEAST  (P32599    ), FLNA_DROME  (Q9VEN1    ), FLNA_HUMAN  (P21333    ), 
FLNA_MOUSE  (Q8BTM8    ), FLNB_HUMAN  (O75369    ), FLNB_MOUSE  (Q80X90    ), 
FLNC_HUMAN  (Q14315    ), FLNC_MOUSE  (Q8VHX6    ), FLNC_RAT    (D3ZHA0    ), 
GELA_DICDI  (P13466    ), MACF1_HUMAN (Q9UPN3    ), MACF1_MOUSE (Q9QXZ0    ), 
MACF1_RAT   (D3ZHV2    ), PLEC_HUMAN  (Q15149    ), PLEC_MOUSE  (Q9QXS1    ), 
PLSI_BOVIN  (A6H742    ), PLSI_CHICK  (P19179    ), PLSI_HUMAN  (Q14651    ), 
PLSI_MOUSE  (Q3V0K9    ), PLSL_DANRE  (Q6P698    ), PLSL_HUMAN  (P13796    ), 
PLSL_MOUSE  (Q61233    ), PLST_BOVIN  (A7E3Q8    ), PLST_CRIGR  (O88818    ), 
PLST_HUMAN  (P13797    ), PLST_MOUSE  (Q99K51    ), PLST_RAT    (Q63598    ), 
SPTB1_HUMAN (P11277    ), SPTB1_MOUSE (P15508    ), SPTB2_HUMAN (Q01082    ), 
SPTB2_MOUSE (Q62261    ), SPTCB_DROME (Q00963    ), SPTN2_HUMAN (O15020    ), 
SPTN2_RAT   (Q9QWN8    ), SPTN4_HUMAN (Q9H254    ), SPTN5_HUMAN (Q9NRC6    ), 
SYNE1_HUMAN (Q8NF91    ), SYNE1_MOUSE (Q6ZWR6    ), SYNE2_HUMAN (Q8WXH0    ), 
SYNE2_MOUSE (Q6ZWQ0    ), UTRO_HUMAN  (P46939    )
» more

UniProtKB/Swiss-Prot
False negative sequences
5 sequences

AIN1_SCHPO  (O13728    ), FIMB1_ARATH (Q7G188    ), FIMB3_ARATH (Q9FJ70    ), 
FIMB5_ARATH (Q9FKI0    ), PLEC_RAT    (P30427    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PLEC_CRIGR  (Q9JI55    )

		
UniProtKB/Swiss-Prot
False positive sequences
19 sequences

CARDB_CYNCA (Q9XFX4    ), CATA_MICLU  (P29422    ), CELA1_HUMAN (Q9UNI1    ), 
CEP1_VZVD   (P09301    ), CRF2_ASPFU  (Q4WI46    ), CSLG1_ARATH (Q570S7    ), 
CSLG2_ARATH (Q8VYR4    ), CSLG3_ARATH (Q0WVN5    ), CYPR1_CYNCA (P40782    ), 
FT105_SCHPO (O13776    ), INT1_HUMAN  (Q8N201    ), INT1_MOUSE  (Q6P4S8    ), 
MTMR7_MOUSE (Q9Z2C9    ), OPSB_ASPOR  (Q8NKB6    ), RDRP_OCSVU  (Q83927    ), 
RNA14_SCHPO (O14233    ), SEPF_PEPD6  (Q182V6    ), STAB2_MOUSE (Q8R4U0    ), 
ZDHC7_DICDI (Q552M6    )
» more

PDB
[Detailed view]
33 PDB

1AOA; 1DXX; 1MB8; 1QAG; 1RT8; 1SH5; 1SH6; 1SJJ; 1TJT; 1WKU; 2EYI; 2EYN; 2R0O; 2WA5; 2WA6; 2WA7; 2WFN; 3F7P; 3FER; 3HOC; 3HOP; 3HOR; 3LUE; 4B7L; 4D1E; 4Q57; 4Q58; 4Q59; 4Z6G; 5A36; 5A37; 5A38; 5A4B
» more

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