Entry: PS00019

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General information about the entry

Entry name [info] ACTININ_1
Accession [info] PS00019
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00019

Name and characterization of the entry

Description [info] Actinin-type actin-binding domain signature 1.
Pattern [info]
[EQ]-{LNYH}-x-[ATV]-[FY]-{LDAM}-{T}-W-{PG}-N.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 113 in 100 different sequences
Number of true positive hits 94 in 81 different sequences
Number of 'unknown' hits
Number of false positive hits 19 in 19 different sequences
Number of false negative sequences 5
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 83.19 %
Recall (true positives / (true positives + false negatives)) 94.95 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
81 sequences

ACTN1_BOVIN (Q3B7N2), ACTN1_CHICK (P05094), ACTN1_HUMAN (P12814), 
ACTN1_MACFA (Q2PFV7), ACTN1_MOUSE (Q7TPR4), ACTN1_RAT   (Q9Z1P2), 
ACTN2_BOVIN (Q3ZC55), ACTN2_CHICK (P20111), ACTN2_HUMAN (P35609), 
ACTN2_MOUSE (Q9JI91), ACTN3_BOVIN (Q0III9), ACTN3_HUMAN (Q08043), 
ACTN3_MOUSE (O88990), ACTN4_BOVIN (A5D7D1), ACTN4_CHICK (Q90734), 
ACTN4_HUMAN (O43707), ACTN4_MOUSE (P57780), ACTN4_PONAB (Q5RCS6), 
ACTN4_RAT   (Q9QXQ0), ACTNA_DICDI (P05095), ACTNB_DICDI (O76329), 
ACTN_ANOGA  (Q7PKQ5), ACTN_DROME  (P18091), ANC1_CAEEL  (Q9N4M4), 
CLMN_HUMAN  (Q96JQ2), CLMN_MOUSE  (Q8C5W0), CTXA_DICDI  (Q54HG2), 
CTXA_POLPA  (Q9Y0T4), CTXB_DICDI  (Q550R2), DMDA_DROME  (Q9VDW6), 
DMD_CAEEL   (Q9TW65), DMD_CANFA   (O97592), DMD_CHICK   (P11533), 
DMD_HUMAN   (P11532), DMD_MOUSE   (P11531), DMD_PIG     (Q5GN48), 
DYST_HUMAN  (Q03001), DYST_MOUSE  (Q91ZU6), FIMB_DICDI  (P54680), 
FIMB_SCHPO  (O59945), FIMB_YEAST  (P32599), FLNA_DROME  (Q9VEN1), 
FLNA_HUMAN  (P21333), FLNA_MOUSE  (Q8BTM8), FLNB_HUMAN  (O75369), 
FLNB_MOUSE  (Q80X90), FLNC_HUMAN  (Q14315), FLNC_MOUSE  (Q8VHX6), 
FLNC_RAT    (D3ZHA0), GELA_DICDI  (P13466), MACF1_HUMAN (Q9UPN3), 
MACF1_MOUSE (Q9QXZ0), MACF1_RAT   (D3ZHV2), PLEC_HUMAN  (Q15149), 
PLEC_MOUSE  (Q9QXS1), PLSI_BOVIN  (A6H742), PLSI_CHICK  (P19179), 
PLSI_HUMAN  (Q14651), PLSI_MOUSE  (Q3V0K9), PLSL_DANRE  (Q6P698), 
PLSL_HUMAN  (P13796), PLSL_MOUSE  (Q61233), PLST_BOVIN  (A7E3Q8), 
PLST_CRIGR  (O88818), PLST_HUMAN  (P13797), PLST_MOUSE  (Q99K51), 
PLST_RAT    (Q63598), SPTB1_HUMAN (P11277), SPTB1_MOUSE (P15508), 
SPTB2_HUMAN (Q01082), SPTB2_MOUSE (Q62261), SPTCB_DROME (Q00963), 
SPTN2_HUMAN (O15020), SPTN2_RAT   (Q9QWN8), SPTN4_HUMAN (Q9H254), 
SPTN5_HUMAN (Q9NRC6), SYNE1_HUMAN (Q8NF91), SYNE1_MOUSE (Q6ZWR6), 
SYNE2_HUMAN (Q8WXH0), SYNE2_MOUSE (Q6ZWQ0), UTRO_HUMAN  (P46939)
» More

UniProtKB/Swiss-Prot
False negative sequences
5 sequences

AIN1_SCHPO  (O13728), FIMB1_ARATH (Q7G188), FIMB2_ARATH (Q9FKI0), 
FIMB3_ARATH (Q9FJ70), PLEC_RAT    (P30427)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

DMD_RAT     (P11530), PLEC_CRIGR  (Q9JI55)

		
UniProtKB/Swiss-Prot
False positive sequences
19 sequences

CARDB_CYNCA (Q9XFX4), CATA_MICLU  (P29422), CELA1_HUMAN (Q9UNI1), 
CRF2_ASPFU  (Q4WI46), CSLG1_ARATH (Q570S7), CSLG2_ARATH (Q8VYR4), 
CSLG3_ARATH (Q0WVN5), CYPR1_CYNCA (P40782), FT105_SCHPO (O13776), 
INT1_HUMAN  (Q8N201), INT1_MOUSE  (Q6P4S8), MTMR7_MOUSE (Q9Z2C9), 
OPSB_ASPOR  (Q8NKB6), RDRP_OCSVU  (Q83927), RNA14_SCHPO (O14233), 
SEPF_PEPD6  (Q182V6), STAB2_MOUSE (Q8R4U0), UL07_VZVD   (P09301), 
ZDHC7_DICDI (Q552M6)
» More

PDB
[Detailed view]
24 PDB

1AOA; 1DXX; 1MB8; 1QAG; 1RT8; 1SH5; 1SH6; 1SJJ; 1TJT; 1WKU; 2EYI; 2EYN; 2R0O; 2WA5; 2WA6; 2WA7; 2WFN; 3F7P; 3FER; 3HOC; 3HOP; 3HOR; 3LUE; 4B7L
» More

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