Entry: PS00020

General information about the entry

Entry name [info] ACTININ_2
Accession [info] PS00020
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00019

Name and characterization of the entry

Description [info] Actinin-type actin-binding domain signature 2.
Pattern [info]
[LIVM]-x-[SGNL]-[LIVMN]-[DAGHENRS]-[SAGPNVT]-x-[DNEAG]-[LIVM]-x-[DEAGQ]-
x(4)-[LIVM]-x-[LM]-[SAG]-[LIVM]-[LIVMT]-[WS]-x(0,1)-[LIVM](2).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 99 in 84 different sequences
Number of true positive hits 99 in 84 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
84 sequences

ACTN1_BOVIN (Q3B7N2), ACTN1_CHICK (P05094), ACTN1_HUMAN (P12814), 
ACTN1_MACFA (Q2PFV7), ACTN1_MOUSE (Q7TPR4), ACTN1_RAT   (Q9Z1P2), 
ACTN2_BOVIN (Q3ZC55), ACTN2_CHICK (P20111), ACTN2_HUMAN (P35609), 
ACTN2_MOUSE (Q9JI91), ACTN3_BOVIN (Q0III9), ACTN3_HUMAN (Q08043), 
ACTN3_MOUSE (O88990), ACTN4_BOVIN (A5D7D1), ACTN4_CHICK (Q90734), 
ACTN4_HUMAN (O43707), ACTN4_MOUSE (P57780), ACTN4_PONAB (Q5RCS6), 
ACTN4_RAT   (Q9QXQ0), ACTNA_DICDI (P05095), ACTNB_DICDI (O76329), 
ACTN_ANOGA  (Q7PKQ5), ACTN_DROME  (P18091), AIN1_SCHPO  (O13728), 
ANC1_CAEEL  (Q9N4M4), CLMN_HUMAN  (Q96JQ2), CLMN_MOUSE  (Q8C5W0), 
DMDA_DROME  (Q9VDW6), DMD_CANFA   (O97592), DMD_CHICK   (P11533), 
DMD_HUMAN   (P11532), DMD_MOUSE   (P11531), DMD_PIG     (Q5GN48), 
DYST_HUMAN  (Q03001), DYST_MOUSE  (Q91ZU6), FIMB1_ARATH (Q7G188), 
FIMB2_ARATH (O50064), FIMB3_ARATH (Q9FJ70), FIMB5_ARATH (Q9FKI0), 
FIMB_DICDI  (P54680), FIMB_SCHPO  (O59945), FIMB_YEAST  (P32599), 
FLNA_DROME  (Q9VEN1), FLNA_HUMAN  (P21333), FLNA_MOUSE  (Q8BTM8), 
FLNB_HUMAN  (O75369), FLNB_MOUSE  (Q80X90), FLNC_HUMAN  (Q14315), 
FLNC_MOUSE  (Q8VHX6), FLNC_RAT    (D3ZHA0), GELA_DICDI  (P13466), 
MACF1_HUMAN (Q9UPN3), MACF1_MOUSE (Q9QXZ0), MACF1_RAT   (D3ZHV2), 
PLEC_CRIGR  (Q9JI55), PLEC_HUMAN  (Q15149), PLEC_MOUSE  (Q9QXS1), 
PLEC_RAT    (P30427), PLSI_BOVIN  (A6H742), PLSI_CHICK  (P19179), 
PLSI_HUMAN  (Q14651), PLSI_MOUSE  (Q3V0K9), PLSL_DANRE  (Q6P698), 
PLSL_HUMAN  (P13796), PLSL_MOUSE  (Q61233), PLST_BOVIN  (A7E3Q8), 
PLST_CRIGR  (O88818), PLST_HUMAN  (P13797), PLST_MOUSE  (Q99K51), 
PLST_RAT    (Q63598), SPTB1_HUMAN (P11277), SPTB1_MOUSE (P15508), 
SPTB2_HUMAN (Q01082), SPTB2_MOUSE (Q62261), SPTCB_DROME (Q00963), 
SPTN2_HUMAN (O15020), SPTN2_RAT   (Q9QWN8), SPTN4_HUMAN (Q9H254), 
SPTN5_HUMAN (Q9NRC6), SYNE1_HUMAN (Q8NF91), SYNE1_MOUSE (Q6ZWR6), 
SYNE2_HUMAN (Q8WXH0), SYNE2_MOUSE (Q6ZWQ0), UTRO_HUMAN  (P46939)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

DMD_CAEEL   (Q9TW65)

		
UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

DMD_RAT     (P11530)

		
PDB
[Detailed view]
28 PDB

1AOA; 1DXX; 1MB8; 1PXY; 1QAG; 1RT8; 1SH5; 1SH6; 1SJJ; 1TJT; 1WKU; 2EYI; 2R0O; 2WA5; 2WA6; 2WA7; 2WFN; 3F7P; 3FER; 3HOC; 3HOP; 3HOR; 3LUE; 4B7L; 4D1E; 4Q57; 4Q58; 4Q59
» More

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