Entry: PS00020

General information about the entry

Entry name [info] ACTININ_2
Accession [info] PS00020
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00019

Name and characterization of the entry

Description [info] Actinin-type actin-binding domain signature 2.
Pattern [info]
[LIVM]-x-[SGNL]-[LIVMN]-[DAGHENRS]-[SAGPNVT]-x-[DNEAG]-[LIVM]-x-[DEAGQ]-
x(4)-[LIVM]-x-[LM]-[SAG]-[LIVM]-[LIVMT]-[WS]-x(0,1)-[LIVM](2).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 100 in 85 different sequences
Number of true positive hits 100 in 85 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 99.01 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
85 sequences

ACTN1_BOVIN (Q3B7N2    ), ACTN1_CHICK (P05094    ), ACTN1_HUMAN (P12814    ), 
ACTN1_MACFA (Q2PFV7    ), ACTN1_MOUSE (Q7TPR4    ), ACTN1_RAT   (Q9Z1P2    ), 
ACTN2_BOVIN (Q3ZC55    ), ACTN2_CHICK (P20111    ), ACTN2_HUMAN (P35609    ), 
ACTN2_MOUSE (Q9JI91    ), ACTN3_BOVIN (Q0III9    ), ACTN3_HUMAN (Q08043    ), 
ACTN3_MOUSE (O88990    ), ACTN4_BOVIN (A5D7D1    ), ACTN4_CHICK (Q90734    ), 
ACTN4_HUMAN (O43707    ), ACTN4_MOUSE (P57780    ), ACTN4_PONAB (Q5RCS6    ), 
ACTN4_RAT   (Q9QXQ0    ), ACTNA_DICDI (P05095    ), ACTNB_DICDI (O76329    ), 
ACTN_ANOGA  (Q7PKQ5    ), ACTN_DROME  (P18091    ), AIN1_SCHPO  (O13728    ), 
ANC1_CAEEL  (Q9N4M4    ), CLMN_HUMAN  (Q96JQ2    ), CLMN_MOUSE  (Q8C5W0    ), 
DMDA_DROME  (Q9VDW6    ), DMD_CANLF   (O97592    ), DMD_CHICK   (P11533    ), 
DMD_HUMAN   (P11532    ), DMD_MOUSE   (P11531    ), DMD_PIG     (Q5GN48    ), 
DMD_RAT     (P11530    ), DYST_HUMAN  (Q03001    ), DYST_MOUSE  (Q91ZU6    ), 
FIMB1_ARATH (Q7G188    ), FIMB2_ARATH (O50064    ), FIMB3_ARATH (Q9FJ70    ), 
FIMB5_ARATH (Q9FKI0    ), FIMB_DICDI  (P54680    ), FIMB_SCHPO  (O59945    ), 
FIMB_YEAST  (P32599    ), FLNA_DROME  (Q9VEN1    ), FLNA_HUMAN  (P21333    ), 
FLNA_MOUSE  (Q8BTM8    ), FLNB_HUMAN  (O75369    ), FLNB_MOUSE  (Q80X90    ), 
FLNC_HUMAN  (Q14315    ), FLNC_MOUSE  (Q8VHX6    ), FLNC_RAT    (D3ZHA0    ), 
GELA_DICDI  (P13466    ), MACF1_HUMAN (Q9UPN3    ), MACF1_MOUSE (Q9QXZ0    ), 
MACF1_RAT   (D3ZHV2    ), PLEC_CRIGR  (Q9JI55    ), PLEC_HUMAN  (Q15149    ), 
PLEC_MOUSE  (Q9QXS1    ), PLEC_RAT    (P30427    ), PLSI_BOVIN  (A6H742    ), 
PLSI_CHICK  (P19179    ), PLSI_HUMAN  (Q14651    ), PLSI_MOUSE  (Q3V0K9    ), 
PLSL_DANRE  (Q6P698    ), PLSL_HUMAN  (P13796    ), PLSL_MOUSE  (Q61233    ), 
PLST_BOVIN  (A7E3Q8    ), PLST_CRIGR  (O88818    ), PLST_HUMAN  (P13797    ), 
PLST_MOUSE  (Q99K51    ), PLST_RAT    (Q63598    ), SPTB1_HUMAN (P11277    ), 
SPTB1_MOUSE (P15508    ), SPTB2_HUMAN (Q01082    ), SPTB2_MOUSE (Q62261    ), 
SPTCB_DROME (Q00963    ), SPTN2_HUMAN (O15020    ), SPTN2_RAT   (Q9QWN8    ), 
SPTN4_HUMAN (Q9H254    ), SPTN5_HUMAN (Q9NRC6    ), SYNE1_HUMAN (Q8NF91    ), 
SYNE1_MOUSE (Q6ZWR6    ), SYNE2_HUMAN (Q8WXH0    ), SYNE2_MOUSE (Q6ZWQ0    ), 
UTRO_HUMAN  (P46939    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

DMD_CAEEL   (Q9TW65    )

		
PDB
[Detailed view]
30 PDB

1AOA; 1DXX; 1MB8; 1PXY; 1QAG; 1RT8; 1SH5; 1SH6; 1SJJ; 1TJT; 1WKU; 2EYI; 2R0O; 2WA5; 2WA6; 2WA7; 2WFN; 3F7P; 3FER; 3HOC; 3HOP; 3HOR; 3LUE; 4B7L; 4D1E; 4Q57; 4Q58; 4Q59; 4Z6G; 5BVR
» more

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