Entry: PS00020

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General information about the entry

Entry name [info] ACTININ_2
Accession [info] PS00020
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-2006 (DATA UPDATE); FEB-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00019

Name and characterization of the entry

Description [info] Actinin-type actin-binding domain signature 2.
Pattern [info]
[LIVM]-x-[SGNL]-[LIVMN]-[DAGHENRS]-[SAGPNVT]-x-[DNEAG]-[LIVM]-x-[DEAGQ]-
x(4)-[LIVM]-x-[LM]-[SAG]-[LIVM]-[LIVMT]-[WS]-x(0,1)-[LIVM](2).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_03 which contains 542'782 sequence entries.


Total number of hits 97 in 82 different sequences
Number of true positive hits 97 in 82 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 1
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.98 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
82 sequences

ACTN1_BOVIN (Q3B7N2), ACTN1_CHICK (P05094), ACTN1_HUMAN (P12814), 
ACTN1_MACFA (Q2PFV7), ACTN1_MOUSE (Q7TPR4), ACTN1_RAT   (Q9Z1P2), 
ACTN2_BOVIN (Q3ZC55), ACTN2_CHICK (P20111), ACTN2_HUMAN (P35609), 
ACTN2_MOUSE (Q9JI91), ACTN3_BOVIN (Q0III9), ACTN3_HUMAN (Q08043), 
ACTN3_MOUSE (O88990), ACTN4_BOVIN (A5D7D1), ACTN4_CHICK (Q90734), 
ACTN4_HUMAN (O43707), ACTN4_MOUSE (P57780), ACTN4_PONAB (Q5RCS6), 
ACTN4_RAT   (Q9QXQ0), ACTNA_DICDI (P05095), ACTNB_DICDI (O76329), 
ACTN_ANOGA  (Q7PKQ5), ACTN_DROME  (P18091), AIN1_SCHPO  (O13728), 
ANC1_CAEEL  (Q9N4M4), CLMN_HUMAN  (Q96JQ2), CLMN_MOUSE  (Q8C5W0), 
DMDA_DROME  (Q9VDW6), DMD_CANFA   (O97592), DMD_CHICK   (P11533), 
DMD_HUMAN   (P11532), DMD_MOUSE   (P11531), DMD_PIG     (Q5GN48), 
DYST_HUMAN  (Q03001), DYST_MOUSE  (Q91ZU6), FIMB1_ARATH (Q7G188), 
FIMB2_ARATH (Q9FKI0), FIMB3_ARATH (Q9FJ70), FIMB_DICDI  (P54680), 
FIMB_SCHPO  (O59945), FIMB_YEAST  (P32599), FLNA_DROME  (Q9VEN1), 
FLNA_HUMAN  (P21333), FLNA_MOUSE  (Q8BTM8), FLNB_HUMAN  (O75369), 
FLNB_MOUSE  (Q80X90), FLNC_HUMAN  (Q14315), FLNC_MOUSE  (Q8VHX6), 
GELA_DICDI  (P13466), MACF1_HUMAN (Q9UPN3), MACF1_MOUSE (Q9QXZ0), 
MACF1_RAT   (D3ZHV2), PLEC_CRIGR  (Q9JI55), PLEC_HUMAN  (Q15149), 
PLEC_MOUSE  (Q9QXS1), PLEC_RAT    (P30427), PLSI_BOVIN  (A6H742), 
PLSI_CHICK  (P19179), PLSI_HUMAN  (Q14651), PLSI_MOUSE  (Q3V0K9), 
PLSL_DANRE  (Q6P698), PLSL_HUMAN  (P13796), PLSL_MOUSE  (Q61233), 
PLST_BOVIN  (A7E3Q8), PLST_CRIGR  (O88818), PLST_HUMAN  (P13797), 
PLST_MOUSE  (Q99K51), PLST_RAT    (Q63598), SPTB1_HUMAN (P11277), 
SPTB1_MOUSE (P15508), SPTB2_HUMAN (Q01082), SPTB2_MOUSE (Q62261), 
SPTCB_DROME (Q00963), SPTN2_HUMAN (O15020), SPTN2_RAT   (Q9QWN8), 
SPTN4_HUMAN (Q9H254), SPTN5_HUMAN (Q9NRC6), SYNE1_HUMAN (Q8NF91), 
SYNE1_MOUSE (Q6ZWR6), SYNE2_HUMAN (Q8WXH0), SYNE2_MOUSE (Q6ZWQ0), 
UTRO_HUMAN  (P46939)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

DMD_CAEEL   (Q9TW65)

		
UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

DMD_RAT     (P11530)

		
PDB
[Detailed view]
24 PDB

1AOA; 1DXX; 1MB8; 1PXY; 1QAG; 1RT8; 1SH5; 1SH6; 1SJJ; 1TJT; 1WKU; 2EYI; 2R0O; 2WA5; 2WA6; 2WA7; 2WFN; 3F7P; 3FER; 3HOC; 3HOP; 3HOR; 3LUE; 4B7L
» More

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