Entry: PS00023

General information about the entry

Entry name [info] FN2_1
Accession [info] PS00023
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00022

Name and characterization of the entry

Description [info] Fibronectin type-II collagen-binding domain signature.
Pattern [info]
C-x(2)-P-F-x-[FYWIV]-x(7)-C-x(8,10)-W-C-x(4)-[DNSR]-[FYW]-x(3,5)-[FYW]-x-
[FYWI]-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_08 which contains 551'987 sequence entries.


Total number of hits 86 in 55 different sequences
Number of true positive hits 86 in 55 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.85 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 3
Site [info] disulfide at position 1
Site [info] disulfide at position 8
Site [info] disulfide at position 11
Site [info] disulfide at position 19
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
55 sequences

BSPH1_HUMAN (Q075Z2    ), BSPH1_MOUSE (Q3UW26    ), ESPB1_CANLF (Q9GL25    ), 
ESPB1_HUMAN (Q96BH3    ), ESPB1_PIG   (Q7YR83    ), FA12_BOVIN  (P98140    ), 
FA12_CAVPO  (Q04962    ), FA12_HUMAN  (P00748    ), FA12_MOUSE  (Q80YC5    ), 
FA12_PIG    (O97507    ), FA12_RAT    (D3ZTE0    ), FINC_BOVIN  (P07589    ), 
FINC_HUMAN  (P02751    ), FINC_MOUSE  (P11276    ), FINC_RAT    (P04937    ), 
HGFA_CANLF  (Q6QNF4    ), HGFA_HUMAN  (Q04756    ), HGFA_MOUSE  (Q9R098    ), 
LY75_HUMAN  (O60449    ), LY75_MESAU  (Q920P9    ), LY75_MOUSE  (Q60767    ), 
MMP2_BOVIN  (Q9GLE5    ), MMP2_CHICK  (Q90611    ), MMP2_HUMAN  (P08253    ), 
MMP2_MOUSE  (P33434    ), MMP2_RABIT  (P50757    ), MMP2_RAT    (P33436    ), 
MMP9_BOVIN  (P52176    ), MMP9_CANLF  (O18733    ), MMP9_HUMAN  (P14780    ), 
MMP9_MOUSE  (P41245    ), MMP9_RABIT  (P41246    ), MMP9_RAT    (P50282    ), 
MPRI_BOVIN  (P08169    ), MPRI_HUMAN  (P11717    ), MPRI_MOUSE  (Q07113    ), 
MRC1_HUMAN  (P22897    ), MRC1_MOUSE  (Q61830    ), MRC2_HUMAN  (Q9UBG0    ), 
MRC2_MOUSE  (Q64449    ), MRC2_RAT    (Q4TU93    ), PB1_PIG     (P80964    ), 
PLA2R_BOVIN (P49259    ), PLA2R_HUMAN (Q13018    ), PLA2R_MOUSE (Q62028    ), 
PLA2R_PONAB (Q5R880    ), PLA2R_RABIT (P49260    ), SE1L1_HUMAN (Q9UBV2    ), 
SE1L1_MESAU (Q9ESM7    ), SE1L1_MOUSE (Q9Z2G6    ), SE1L1_RAT   (Q80Z70    ), 
SFP1_BOVIN  (P02784    ), SFP3_BOVIN  (P04557    ), SFP4_BOVIN  (P81019    ), 
SP1_HORSE   (P81121    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

BSPH2_MOUSE (Q0Q236    )

		
UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

SFP1_BOSIN  (B3EWK6    )

		
PDB
[Detailed view]
19 PDB

1CK7; 1CXW; 1E88; 1E8B; 1EAK; 1GXD; 1H8P; 1J7M; 1KS0; 1L6J; 1PDC; 1QO6; 2FN2; 2V5O; 2V5P; 3M7P; 3MQL; 5AO5; 5AO6
» more

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