Entry: PS00032

General information about the entry

Entry name [info] ANTENNAPEDIA
Accession [info] PS00032
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); OCT-1993 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00032

Name and characterization of the entry

Description [info] 'Homeobox' antennapedia-type protein signature.
Pattern [info]
[LIVMFE]-[FY]-P-W-M-[KRQTA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 165 in 165 different sequences
Number of true positive hits 156 in 156 different sequences
Number of 'unknown' hits 0
Number of false positive hits 9 in 9 different sequences
Number of false negative sequences 38
Number of 'partial' sequences 21
Precision (true positives / (true positives + false positives)) 94.55 %
Recall (true positives / (true positives + false negatives)) 80.41 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
156 sequences

ANTP_DROME  (P02833), ANTP_DROSU  (Q24645), DFD_DROME   (P07548), 
HMPB_DROME  (P31264), HOX3_BRAFL  (P50901), HXA2A_TAKRU (Q1KL11), 
HXA2B_DANRE (O42365), HXA2_BOVIN  (Q0VCS4), HXA2_CALJA  (B0VXK3), 
HXA2_CHICK  (Q08727), HXA2_HETFR  (Q9IA20), HXA2_HUMAN  (O43364), 
HXA2_MOUSE  (P31245), HXA2_PAPAN  (A9L937), HXA2_RAT    (P31246), 
HXA3A_DANRE (Q8AWZ2), HXA3A_TAKRU (Q1KL12), HXA3_BOVIN  (Q08DG7), 
HXA3_CHICK  (O93353), HXA3_HETFR  (Q9IA21), HXA3_HUMAN  (O43365), 
HXA3_MOUSE  (P02831), HXA4A_DANRE (Q9PWL5), HXA4A_TAKRU (Q1KL13), 
HXA4_CHICK  (P17277), HXA4_HETFR  (Q9IA22), HXA4_HUMAN  (Q00056), 
HXA4_MORSA  (Q9PWD2), HXA4_MOUSE  (P06798), HXA5A_DANRE (Q9YGT6), 
HXA5A_TAKRU (Q1KL14), HXA5_AMBME  (P50208), HXA5_BOVIN  (Q2HJ67), 
HXA5_CHICK  (Q6B3N0), HXA5_HETFR  (Q9IA23), HXA5_HUMAN  (P20719), 
HXA5_LAGLA  (A2D5K9), HXA5_LEMCA  (A2D5Y4), HXA5_MORSA  (Q9PWD3), 
HXA5_MOUSE  (P09021), HXA5_RAT    (P52949), HXA6_CHICK  (Q5YLH5), 
HXA6_HETFR  (Q9IA24), HXA6_HUMAN  (P31267), HXA6_MOUSE  (P09092), 
HXA7_CHICK  (Q90VZ9), HXA7_COTJA  (P24061), HXA7_HETFR  (Q9IA25), 
HXA7_HUMAN  (P31268), HXA7_MORSA  (Q9PWD4), HXA7_MOUSE  (P02830), 
HXA7_PANPA  (A1YGK7), HXA7_PANTR  (A2T7F3), HXA7_XENLA  (P09071), 
HXB2A_DANRE (O42367), HXB2A_TAKRU (Q6IEI0), HXB2_HUMAN  (P14652), 
HXB2_MOUSE  (P0C1T1), HXB3A_DANRE (O42368), HXB3A_TAKRU (Q1KKX7), 
HXB3_CHICK  (P23682), HXB3_HUMAN  (P14651), HXB3_MOUSE  (P09026), 
HXB4A_DANRE (P22574), HXB4A_TAKRU (O13074), HXB4_BOVIN  (Q08DG5), 
HXB4_CHICK  (P14840), HXB4_HUMAN  (P17483), HXB4_MOUSE  (P10284), 
HXB4_XENLA  (P09070), HXB5A_DANRE (P09014), HXB5A_TAKRU (Q1KKX9), 
HXB5B_DANRE (P09013), HXB5B_TAKRU (Q1KKX0), HXB5_HUMAN  (P09067), 
HXB5_MOUSE  (P09079), HXB5_XENLA  (P09019), HXB6A_DANRE (P15861), 
HXB6A_TAKRU (Q1KKY0), HXB6B_DANRE (Q9YGT4), HXB6B_TAKRU (Q1KKX1), 
HXB6_HUMAN  (P17509), HXB6_MOUSE  (P09023), HXB7A_DANRE (Q8AWY9), 
HXB7A_XENLA (Q91771), HXB7B_XENLA (P04476), HXB7_BOVIN  (Q9TT89), 
HXB7_GORGO  (A1YFA5), HXB7_HUMAN  (P09629), HXB7_MOUSE  (P09024), 
HXB7_RAT    (P18864), HXB8A_DANRE (Q8AWZ0), HXB8A_TAKRU (Q1KKY1), 
HXB8B_DANRE (Q8JH55), HXB8_CHICK  (P23681), HXB8_HUMAN  (P17481), 
HXB8_MOUSE  (P09632), HXC4A_DANRE (Q9PWM3), HXC4A_TAKRU (Q1KKU6), 
HXC4_HUMAN  (P09017), HXC4_MOUSE  (Q08624), HXC4_ORYLA  (Q9PVS4), 
HXC5A_DANRE (P09074), HXC5A_TAKRU (Q1KKU7), HXC5_HUMAN  (Q00444), 
HXC5_MOUSE  (P32043), HXC5_XENLA  (P09020), HXC6A_DANRE (P15862), 
HXC6A_TAKRU (O42504), HXC6B_DANRE (Q9PWM5), HXC6_HUMAN  (P09630), 
HXC6_MOUSE  (P10629), HXC6_NOTVI  (P14858), HXC6_SHEEP  (P49925), 
HXC6_XENLA  (P02832), HXC8A_DANRE (Q68EH7), HXC8A_TAKRU (O42503), 
HXC8_CHICK  (Q9YH13), HXC8_HUMAN  (P31273), HXC8_MOUSE  (P09025), 
HXD3A_DANRE (O42370), HXD3A_TAKRU (Q1KKS7), HXD3_HAPBU  (A8DT10), 
HXD3_HUMAN  (P31249), HXD3_MOUSE  (P09027), HXD3_ORYLA  (Q3V5Z9), 
HXD3_XENLA  (A1L2P5), HXD4A_DANRE (O57374), HXD4A_TAKRU (Q1KKS8), 
HXD4B_TAKRU (Q1KKR6), HXD4_ATEGE  (A2D4P8), HXD4_CHICK  (P17278), 
HXD4_GORGO  (A1YER7), HXD4_HUMAN  (P09016), HXD4_LAGLA  (A2D5I1), 
HXD4_MOUSE  (P10628), HXD4_PANPA  (A1YFY3), HXD4_PANTR  (A2T6X6), 
HXD4_SAGLB  (A1YFD8), HXD5_HETFR  (Q9IA11), HXD8_CHICK  (P23459), 
HXD8_HETFR  (Q9IA12), HXD8_HUMAN  (P13378), HXD8_MOUSE  (P23463), 
HXD8_PANTR  (A2T748), LIN39_CAEEL (P34684), MAB5_CAEEL  (P10038), 
SCR_DROME   (P09077), UBX_DROFU   (P05048), UBX_DROHY   (Q23946), 
UBX_DROME   (P83949), UBX_DROPS   (P20822), UBX_DROSI   (P83950), 
UBX_DROVI   (Q24703), UBX_JUNCO   (Q8T940), UBX_MUSDO   (Q25451)
» More

UniProtKB/Swiss-Prot
False negative sequences
38 sequences

ABDA_AEDAE  (P29552), ABDA_ANOGA  (O76762), ABDA_CULQU  (B0W1V2), 
ABDA_DROME  (P29555), BARH1_DROME (Q24255), BARH2_DROME (Q24256), 
HXA1A_DANRE (Q98SI1), HXA1A_TAKRU (Q1KL10), HXA1_HETFR  (Q9IA19), 
HXA1_HUMAN  (P49639), HXA1_MOUSE  (P09022), HXA1_RAT    (O08656), 
HXA2B_TAKRU (Q1KKZ2), HXB1A_TAKRU (Q1KKX5), HXB1B_DANRE (Q90423), 
HXB1B_TAKRU (Q1KKW8), HXB1_ATEGE  (A2D4R4), HXB1_CHICK  (P31259), 
HXB1_CYPCA  (Q90346), HXB1_HUMAN  (P14653), HXB1_MACMU  (A2D649), 
HXB1_MACNE  (A2T6H5), HXB1_MOUSE  (P17919), HXB1_PANPA  (A1YG01), 
HXB1_PANTR  (A2T6Z0), HXB1_PONPY  (A2T7J2), HXC3A_DANRE (P28174), 
HXD1_HUMAN  (Q9GZZ0), HXD1_MOUSE  (Q01822), LAB_DROME   (P10105), 
PDX1_GORGO  (A1YF08), PDX1_HUMAN  (P52945), PDX1_MESAU  (P70118), 
PDX1_MOUSE  (P52946), PDX1_PANPA  (A1YG85), PDX1_PANTR  (A2T756), 
PDX1_RAT    (P52947), SMOX1_SCHMA (Q26600)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
21 sequences

ABDA_APIME  (P15856), ABDA_SCHGR  (P29556), HLOX2_HIRME (P21523), 
HXA2_NOTVI  (P31261), HXA4_LINSA  (P81192), HXA4_RAT    (P09635), 
HXA5_SALSA  (P09637), HXA7_RAT    (P09634), HXB2_SALSA  (P09638), 
HXB3_XENLA  (P31247), HXB5_CHICK  (P14838), HXB5_SHEEP  (P14157), 
HXB6_CHICK  (P14839), HXB6_XENLA  (P31256), HXB8_PIG    (P09078), 
HXB8_RAT    (P18863), HXC4_RAT    (P18865), HXC5_NOTVI  (P31262), 
HXC8_RAT    (P18866), HXD3_RAT    (P18867), SCR_APIME   (P15859)
» More

UniProtKB/Swiss-Prot
False positive sequences
9 sequences

ANTR1_ARATH (O82390), ARFH_ARATH  (Q9FGV1), BZP49_ARATH (Q9LXX4), 
EAST_DROME  (P13582), NRTD_SYNY3  (P73265), SSUB_BACLD  (Q65M64), 
SWS2_YEAST  (P53937), Y116_OSHVF  (Q6R795), YL515_MIMIV (Q5UQ80)
» More

PDB
[Detailed view]
4 PDB

1B8I; 2R5Y; 2R5Z; 4CYC

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