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Entry: PS00032

General information about the entry

Entry name [info] ANTENNAPEDIA
Accession [info] PS00032
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-OCT-1993 DATA UPDATE; 27-SEP-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00032

Name and characterization of the entry

Description [info] 'Homeobox' antennapedia-type protein signature.
Pattern [info]
[LIVMFE]-[FY]-P-W-M-[KRQTA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_09 which contains 555'594 sequence entries.


Total number of hits 165 in 165 different sequences
Number of true positive hits 156 in 156 different sequences
Number of 'unknown' hits 0
Number of false positive hits 9 in 9 different sequences
Number of false negative sequences 38
Number of 'partial' sequences 21
Precision (true positives / (true positives + false positives)) 94.55 %
Recall (true positives / (true positives + false negatives)) 80.41 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
156 sequences

ANTP_DROME  (P02833    ), ANTP_DROSU  (Q24645    ), DFD_DROME   (P07548    ), 
HMPB_DROME  (P31264    ), HOX3_BRAFL  (P50901    ), HXA2A_TAKRU (Q1KL11    ), 
HXA2B_DANRE (O42365    ), HXA2_BOVIN  (Q0VCS4    ), HXA2_CALJA  (B0VXK3    ), 
HXA2_CHICK  (Q08727    ), HXA2_HETFR  (Q9IA20    ), HXA2_HUMAN  (O43364    ), 
HXA2_MOUSE  (P31245    ), HXA2_PAPAN  (A9L937    ), HXA2_RAT    (P31246    ), 
HXA3A_DANRE (Q8AWZ2    ), HXA3A_TAKRU (Q1KL12    ), HXA3_BOVIN  (Q08DG7    ), 
HXA3_CHICK  (O93353    ), HXA3_HETFR  (Q9IA21    ), HXA3_HUMAN  (O43365    ), 
HXA3_MOUSE  (P02831    ), HXA4A_DANRE (Q9PWL5    ), HXA4A_TAKRU (Q1KL13    ), 
HXA4_CHICK  (P17277    ), HXA4_HETFR  (Q9IA22    ), HXA4_HUMAN  (Q00056    ), 
HXA4_MORSA  (Q9PWD2    ), HXA4_MOUSE  (P06798    ), HXA5A_DANRE (Q9YGT6    ), 
HXA5A_TAKRU (Q1KL14    ), HXA5_AMBME  (P50208    ), HXA5_BOVIN  (Q2HJ67    ), 
HXA5_CHICK  (Q6B3N0    ), HXA5_HETFR  (Q9IA23    ), HXA5_HUMAN  (P20719    ), 
HXA5_LAGLA  (A2D5K9    ), HXA5_LEMCA  (A2D5Y4    ), HXA5_MORSA  (Q9PWD3    ), 
HXA5_MOUSE  (P09021    ), HXA5_RAT    (P52949    ), HXA6_CHICK  (Q5YLH5    ), 
HXA6_HETFR  (Q9IA24    ), HXA6_HUMAN  (P31267    ), HXA6_MOUSE  (P09092    ), 
HXA7_CHICK  (Q90VZ9    ), HXA7_COTJA  (P24061    ), HXA7_HETFR  (Q9IA25    ), 
HXA7_HUMAN  (P31268    ), HXA7_MORSA  (Q9PWD4    ), HXA7_MOUSE  (P02830    ), 
HXA7_PANPA  (A1YGK7    ), HXA7_PANTR  (A2T7F3    ), HXA7_XENLA  (P09071    ), 
HXB2A_DANRE (O42367    ), HXB2A_TAKRU (Q6IEI0    ), HXB2_HUMAN  (P14652    ), 
HXB2_MOUSE  (P0C1T1    ), HXB3A_DANRE (O42368    ), HXB3A_TAKRU (Q1KKX7    ), 
HXB3_CHICK  (P23682    ), HXB3_HUMAN  (P14651    ), HXB3_MOUSE  (P09026    ), 
HXB4A_DANRE (P22574    ), HXB4A_TAKRU (O13074    ), HXB4_BOVIN  (Q08DG5    ), 
HXB4_CHICK  (P14840    ), HXB4_HUMAN  (P17483    ), HXB4_MOUSE  (P10284    ), 
HXB4_XENLA  (P09070    ), HXB5A_DANRE (P09014    ), HXB5A_TAKRU (Q1KKX9    ), 
HXB5B_DANRE (P09013    ), HXB5B_TAKRU (Q1KKX0    ), HXB5_HUMAN  (P09067    ), 
HXB5_MOUSE  (P09079    ), HXB5_XENLA  (P09019    ), HXB6A_DANRE (P15861    ), 
HXB6A_TAKRU (Q1KKY0    ), HXB6B_DANRE (Q9YGT4    ), HXB6B_TAKRU (Q1KKX1    ), 
HXB6_HUMAN  (P17509    ), HXB6_MOUSE  (P09023    ), HXB7A_DANRE (Q8AWY9    ), 
HXB7A_XENLA (Q91771    ), HXB7B_XENLA (P04476    ), HXB7_BOVIN  (Q9TT89    ), 
HXB7_GORGO  (A1YFA5    ), HXB7_HUMAN  (P09629    ), HXB7_MOUSE  (P09024    ), 
HXB7_RAT    (P18864    ), HXB8A_DANRE (Q8AWZ0    ), HXB8A_TAKRU (Q1KKY1    ), 
HXB8B_DANRE (Q8JH55    ), HXB8_CHICK  (P23681    ), HXB8_HUMAN  (P17481    ), 
HXB8_MOUSE  (P09632    ), HXC4A_DANRE (Q9PWM3    ), HXC4A_TAKRU (Q1KKU6    ), 
HXC4_HUMAN  (P09017    ), HXC4_MOUSE  (Q08624    ), HXC4_ORYLA  (Q9PVS4    ), 
HXC5A_DANRE (P09074    ), HXC5A_TAKRU (Q1KKU7    ), HXC5_HUMAN  (Q00444    ), 
HXC5_MOUSE  (P32043    ), HXC5_XENLA  (P09020    ), HXC6A_DANRE (P15862    ), 
HXC6A_TAKRU (O42504    ), HXC6B_DANRE (Q9PWM5    ), HXC6_HUMAN  (P09630    ), 
HXC6_MOUSE  (P10629    ), HXC6_NOTVI  (P14858    ), HXC6_SHEEP  (P49925    ), 
HXC6_XENLA  (P02832    ), HXC8A_DANRE (Q68EH7    ), HXC8A_TAKRU (O42503    ), 
HXC8_CHICK  (Q9YH13    ), HXC8_HUMAN  (P31273    ), HXC8_MOUSE  (P09025    ), 
HXD3A_DANRE (O42370    ), HXD3A_TAKRU (Q1KKS7    ), HXD3_HAPBU  (A8DT10    ), 
HXD3_HUMAN  (P31249    ), HXD3_MOUSE  (P09027    ), HXD3_ORYLA  (Q3V5Z9    ), 
HXD3_XENLA  (A1L2P5    ), HXD4A_DANRE (O57374    ), HXD4A_TAKRU (Q1KKS8    ), 
HXD4B_TAKRU (Q1KKR6    ), HXD4_ATEGE  (A2D4P8    ), HXD4_CHICK  (P17278    ), 
HXD4_GORGO  (A1YER7    ), HXD4_HUMAN  (P09016    ), HXD4_LAGLA  (A2D5I1    ), 
HXD4_MOUSE  (P10628    ), HXD4_PANPA  (A1YFY3    ), HXD4_PANTR  (A2T6X6    ), 
HXD4_SAGLB  (A1YFD8    ), HXD5_HETFR  (Q9IA11    ), HXD8_CHICK  (P23459    ), 
HXD8_HETFR  (Q9IA12    ), HXD8_HUMAN  (P13378    ), HXD8_MOUSE  (P23463    ), 
HXD8_PANTR  (A2T748    ), LIN39_CAEEL (P34684    ), MAB5_CAEEL  (P10038    ), 
SCR_DROME   (P09077    ), UBX_DROFU   (P05048    ), UBX_DROHY   (Q23946    ), 
UBX_DROME   (P83949    ), UBX_DROPS   (P20822    ), UBX_DROSI   (P83950    ), 
UBX_DROVI   (Q24703    ), UBX_JUNCO   (Q8T940    ), UBX_MUSDO   (Q25451    )
» more

UniProtKB/Swiss-Prot
False negative sequences
38 sequences

ABDA_AEDAE  (P29552    ), ABDA_ANOGA  (O76762    ), ABDA_CULQU  (B0W1V2    ), 
ABDA_DROME  (P29555    ), BARH1_DROME (Q24255    ), BARH2_DROME (Q24256    ), 
HXA1A_DANRE (Q98SI1    ), HXA1A_TAKRU (Q1KL10    ), HXA1_HETFR  (Q9IA19    ), 
HXA1_HUMAN  (P49639    ), HXA1_MOUSE  (P09022    ), HXA1_RAT    (O08656    ), 
HXA2B_TAKRU (Q1KKZ2    ), HXB1A_TAKRU (Q1KKX5    ), HXB1B_DANRE (Q90423    ), 
HXB1B_TAKRU (Q1KKW8    ), HXB1_ATEGE  (A2D4R4    ), HXB1_CHICK  (P31259    ), 
HXB1_CYPCA  (Q90346    ), HXB1_HUMAN  (P14653    ), HXB1_MACMU  (A2D649    ), 
HXB1_MACNE  (A2T6H5    ), HXB1_MOUSE  (P17919    ), HXB1_PANPA  (A1YG01    ), 
HXB1_PANTR  (A2T6Z0    ), HXB1_PONPY  (A2T7J2    ), HXC3A_DANRE (P28174    ), 
HXD1_HUMAN  (Q9GZZ0    ), HXD1_MOUSE  (Q01822    ), LAB_DROME   (P10105    ), 
PDX1_GORGO  (A1YF08    ), PDX1_HUMAN  (P52945    ), PDX1_MESAU  (P70118    ), 
PDX1_MOUSE  (P52946    ), PDX1_PANPA  (A1YG85    ), PDX1_PANTR  (A2T756    ), 
PDX1_RAT    (P52947    ), SMOX1_SCHMA (Q26600    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
21 sequences

ABDA_APIME  (P15856    ), ABDA_SCHGR  (P29556    ), HLOX2_HIRME (P21523    ), 
HXA2_NOTVI  (P31261    ), HXA4_LINSA  (P81192    ), HXA4_RAT    (P09635    ), 
HXA5_SALSA  (P09637    ), HXA7_RAT    (P09634    ), HXB2_SALSA  (P09638    ), 
HXB3_XENLA  (P31247    ), HXB5_CHICK  (P14838    ), HXB5_SHEEP  (P14157    ), 
HXB6_CHICK  (P14839    ), HXB6_XENLA  (P31256    ), HXB8_PIG    (P09078    ), 
HXB8_RAT    (P18863    ), HXC4_RAT    (P18865    ), HXC5_NOTVI  (P31262    ), 
HXC8_RAT    (P18866    ), HXD3_RAT    (P18867    ), SCR_APIME   (P15859    )
» more

UniProtKB/Swiss-Prot
False positive sequences
9 sequences

ANTR1_ARATH (O82390    ), ARFH_ARATH  (Q9FGV1    ), BZP49_ARATH (Q9LXX4    ), 
EAST_DROME  (P13582    ), NRTD_SYNY3  (P73265    ), SSUB_BACLD  (Q65M64    ), 
SWS2_YEAST  (P53937    ), Y116_OSHVF  (Q6R795    ), YL515_MIMIV (Q5UQ80    )
» more

PDB
[Detailed view]
4 PDB

1B8I; 2R5Y; 2R5Z; 4CYC

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