PROSITE entry PS00058
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Direct ScanProsite submission
General information about the entry
Entry name [info] | DNA_MISMATCH_REPAIR_1 |
Accession [info] | PS00058 |
Entry type [info] | PATTERN |
Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00057 |
Name and characterization of the entry
Description [info] | DNA mismatch repair proteins mutL / hexB / PMS1 signature. |
Pattern [info] |
G-F-R-G-E-[AG]-L. |
Numerical results [info]
Total number of hits | 461 in 461 different sequences |
Number of true positive hits | 458 in 458 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 3 in 3 different sequences |
Number of false negative sequences | 10 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 99.35 % |
Recall (true positives / (true positives + false negatives)) | 97.86 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
458 sequences
HEXB_STRPN (P0A3R1), HEXB_STRR6 (P0A3R2), MLH1_ARATH (Q9ZRV4), MLH1_DICDI (Q54KD8), MLH1_HUMAN (P40692), MLH1_MOUSE (Q9JK91), MLH1_RAT(P97679), MLH1_SCHPO (Q9P7W6), MLH1_YEAST (P38920), MLH2_YEAST (Q07980), MLH3_ARATH (F4JN26), MLH3_HUMAN (Q9UHC1), MUTL_ACIC5 (C1F876), MUTL_ACICJ (A5FW68), MUTL_ACTPJ (B0BTY3), MUTL_ACTSZ (A6VN10), MUTL_AERHH (A0KGR9), MUTL_AERS4 (A4SR27), MUTL_AFIC5 (B6JIV1), MUTL_AGARV (C4ZA52), MUTL_AGRFC (Q8UHI3), MUTL_AKKM8 (B2ULE2), MUTL_ALIF1 (Q5E2C6), MUTL_ALIFM (B5FBR6), MUTL_ALISL (B6EMQ9), MUTL_ALKMQ (A6TR78), MUTL_ALLAM (B9JSD6), MUTL_ANADF (A7HC45), MUTL_ANAPZ (Q2GJE2), MUTL_ANOFW (B7GIA3), MUTL_AQUAE (O67518), MUTL_AQUPY (P70754), MUTL_AZOC5 (A8I6D2), MUTL_AZOVD (C1DLQ0), MUTL_BACAA (C3P5H4), MUTL_BACAC (C3L823), MUTL_BACAH (A0RHE0), MUTL_BACAN (Q81WR4), MUTL_BACC0 (B7JJ46), MUTL_BACC1 (Q732V8), MUTL_BACC2 (B7ITM0), MUTL_BACC3 (C1ENZ2), MUTL_BACC4 (B7HDP3), MUTL_BACC7 (B7HLA2), MUTL_BACCN (A7GR98), MUTL_BACCQ (B9IV58), MUTL_BACCR (Q81A26), MUTL_BACCZ (Q636Q8), MUTL_BACFN (Q5L8M5), MUTL_BACFR (Q64NX1), MUTL_BACHK (Q6HF47), MUTL_BACLD (Q65JE1), MUTL_BACMK (A9VS12), MUTL_BACP2 (A8FDH4), MUTL_BACSU (P49850), MUTL_BACTN (Q8A120), MUTL_BACVZ (A7Z4X6), MUTL_BARBK (A1UU01), MUTL_BARHE (Q6G4R4), MUTL_BARQU (Q6G0J4), MUTL_BART1 (A9IN82), MUTL_BAUCH (Q1LSQ2), MUTL_BEII9 (B2II71), MUTL_BORA1 (Q2KX20), MUTL_BORAP (Q0SNV1), MUTL_BORBR (Q7WG61), MUTL_BORBU (O51229), MUTL_BORDL (B5RL36), MUTL_BORGP (Q662F3), MUTL_BORPA (Q7W4N5), MUTL_BORPE (Q7W0A6), MUTL_BORRA (B5RR29), MUTL_BORT9 (A1QZ05), MUTL_BRADU (Q89DE6), MUTL_BRASB (A5ECL8), MUTL_BRASO (A4Z0Q5), MUTL_BRUA1 (B2SD15), MUTL_BRUA2 (Q2YIH2), MUTL_BRUA4 (A6X3F3), MUTL_BRUAB (Q579M7), MUTL_BRUC2 (A9MDX3), MUTL_BRUMB (C0RKF6), MUTL_BRUME (P65489), MUTL_BRUO2 (A5VTW1), MUTL_BRUSI (A9WXS2), MUTL_BRUSU (P65490), MUTL_BUCA5 (B8D8D4), MUTL_BUCAI (P57633), MUTL_BUCAP (Q8K913), MUTL_BUCAT (B8D891), MUTL_BUCBP (Q89A38), MUTL_CALS4 (Q8RA70), MUTL_CARHZ (Q3ACA6), MUTL_CAUSK (B0SWX9), MUTL_CAUVC (P0CAV5), MUTL_CAUVN (B8H173), MUTL_CELJU (B3PDC3), MUTL_CHESB (Q11L80), MUTL_CHLAB (Q5L4T7), MUTL_CHLCH (Q3AUA2), MUTL_CHLCV (Q821I9), MUTL_CHLFF (Q256F3), MUTL_CHLL2 (B3EHI9), MUTL_CHLL3 (Q3B1F8), MUTL_CHLMU (Q9PJG5), MUTL_CHLP8 (B3QL59), MUTL_CHLPB (B3EL44), MUTL_CHLPD (A1BCW2), MUTL_CHLPM (A4SGM5), MUTL_CHLPN (Q9Z794), MUTL_CHLT2 (B0B8E9), MUTL_CHLT3 (B3QW86), MUTL_CHLTA (Q3KLC2), MUTL_CHLTB (B0BA28), MUTL_CHLTE (Q8KAX3), MUTL_CHLTR (O84579), MUTL_CHRFK (A0LZH8), MUTL_CHRSD (Q1QY28), MUTL_CITBB (B5EGD4), MUTL_CITK8 (A8AMN1), MUTL_CLOAB (Q97I20), MUTL_CLOB1 (A7FUK9), MUTL_CLOB6 (C3KX34), MUTL_CLOB8 (A6LWJ1), MUTL_CLOBB (B2TIB8), MUTL_CLOBJ (C1FNT8), MUTL_CLOBK (B1IM67), MUTL_CLOBL (A7GE44), MUTL_CLOBM (B1KSA2), MUTL_CLONN (A0Q0M7), MUTL_CLOP1 (Q0TRD5), MUTL_CLOPE (Q8XL86), MUTL_CLOPS (Q0STR3), MUTL_CLOTE (Q895H3), MUTL_COLP3 (Q48A24), MUTL_COXB2 (B6J016), MUTL_COXBN (A9KE32), MUTL_COXBR (A9NCK3), MUTL_COXBU (Q83CM9), MUTL_CROS5 (B1X109), MUTL_CROS8 (A7MMA2), MUTL_DEIRA (Q9RTR0), MUTL_DESAP (B1I293), MUTL_DESRM (A4J5Q3), MUTL_DICNV (A5EXM6), MUTL_DICT6 (B5YE42), MUTL_DICTD (B8E280), MUTL_ECO24 (A7ZV39), MUTL_ECO27 (B7UQH9), MUTL_ECO45 (B7MKX4), MUTL_ECO55 (B7LC24), MUTL_ECO57 (Q8XDN4), MUTL_ECO5E (B5Z2H6), MUTL_ECO81 (B7MSY3), MUTL_ECO8A (B7M8T0), MUTL_ECOBW (C5A1G1), MUTL_ECODH (B1XDS1), MUTL_ECOHS (A8A7R4), MUTL_ECOK1 (A1AJ76), MUTL_ECOL5 (Q0T9M3), MUTL_ECOL6 (Q8FAK9), MUTL_ECOLC (B1IT36), MUTL_ECOLI (P23367), MUTL_ECOLU (B7NGA4), MUTL_ECOSE (B6I274), MUTL_ECOSM (B1LQJ0), MUTL_EDWI9 (C5BDM9), MUTL_EHRCR (Q2GFV4), MUTL_ELUMP (B2KB18), MUTL_ENDTX (B1H0C7), MUTL_ENT38 (A4W5R1), MUTL_ERWT9 (B2VCU8), MUTL_ESCF3 (B7LLV2), MUTL_EXIS2 (B1YMD8), MUTL_EXISA (C4L192), MUTL_FERNB (A7HNR3), MUTL_FLAJ1 (A5FNH2), MUTL_FLAPJ (A6GYR1), MUTL_GEMAT (C1A8L2), MUTL_GEODF (B9M3N0), MUTL_GEOKA (Q5L0E4), MUTL_GEOSL (Q74BP0), MUTL_GEOSM (C6E4L2), MUTL_GEOSW (C5D9H6), MUTL_GEOTN (A4IMI1), MUTL_GEOUR (A5GEV5), MUTL_HAEDU (Q7VN43), MUTL_HAEI8 (Q4QPH7), MUTL_HAEIE (A5UB71), MUTL_HAEIG (A5UFN4), MUTL_HAEIN (P44494), MUTL_HALH5 (Q9KAC1), MUTL_HALOH (B8CX97), MUTL_HALS3 (B0R2S6), MUTL_HALSA (Q9HSM6), MUTL_HELMI (B0TB10), MUTL_HERAR (A4G289), MUTL_HISS1 (Q0I463), MUTL_HISS2 (B0UUU5), MUTL_IDILO (Q5QW89), MUTL_JANMA (A6SV55), MUTL_KLEP3 (B5Y334), MUTL_KLEP7 (A6TH85), MUTL_KORVE (Q1ILN0), MUTL_KOSOT (C5CF28), MUTL_LACAC (Q5FLX4), MUTL_LACCB (B3W9W3), MUTL_LACDA (Q1G939), MUTL_LACDB (Q048Y5), MUTL_LACGA (Q045Q4), MUTL_LACH4 (A8YTI0), MUTL_LACJO (Q74KW0), MUTL_LACLA (Q9CDL1), MUTL_LACLM (A2RP08), MUTL_LACLS (Q02VS5), MUTL_LACP3 (Q035Z3), MUTL_LACPL (Q88UZ8), MUTL_LEPBA (B0SB85), MUTL_LEPBJ (Q04QW2), MUTL_LEPBL (Q04Z69), MUTL_LEPBP (B0ST13), MUTL_LEPIC (Q72PF7), MUTL_LEPIN (Q8F6X4), MUTL_LEUCK (B1N024), MUTL_LEVBA (Q03R34), MUTL_LIGS1 (Q1WT16), MUTL_LIMF3 (B2GB18), MUTL_LIMRD (A5VIX0), MUTL_LIMRJ (B2G6E6), MUTL_LISIN (Q92BV2), MUTL_LISMC (C1L2W0), MUTL_LISMF (Q71ZR6), MUTL_LISMH (B8DFS3), MUTL_LISMO (Q8Y788), MUTL_LISW6 (A0AIK6), MUTL_MACCJ (B9EBI5), MUTL_MANSM (Q65SD7), MUTL_METLZ (A2SSN1), MUTL_METMJ (A3CWX7), MUTL_METSB (B8ETE4), MUTL_METTP (A0B977), MUTL_MICAN (B0JS91), MUTL_NEIG1 (Q5F8M6), MUTL_NEIG2 (B4RLX4), MUTL_NEIM0 (A9M0G1), MUTL_NEIMA (Q9JTS2), MUTL_NEIMB (Q9JYT2), MUTL_NEIMF (A1KUP6), MUTL_NEOSM (Q2GDF7), MUTL_NITHX (Q1QIP3), MUTL_NITWN (Q3SPJ0), MUTL_NOSP7 (B2IYW1), MUTL_NOSS1 (Q8YSM9), MUTL_OPITP (B1ZZY2), MUTL_PARD8 (A6LEJ8), MUTL_PARM1 (Q2VYV5), MUTL_PASMU (P57886), MUTL_PECAS (Q6D065), MUTL_PECCP (C6DFJ9), MUTL_PEDPA (Q03EQ8), MUTL_PELPB (B4SGC3), MUTL_PELPD (A1AT89), MUTL_PELTS (A5D2K5), MUTL_PERMH (C0QSY6), MUTL_PETMO (A9BJB9), MUTL_PHEZH (B4RA70), MUTL_PHOLL (Q7MYT9), MUTL_PHOV8 (A6KXH3), MUTL_PORG3 (B2RL29), MUTL_PORGI (Q7MX15), MUTL_PROA2 (B4S3X8), MUTL_PROMH (B4F203), MUTL_PSEA7 (A6VD59), MUTL_PSEA8 (B7V209), MUTL_PSEAB (Q02F72), MUTL_PSEAE (Q9HUL8), MUTL_PSEE4 (Q1I447), MUTL_PSEFS (C3KDW1), MUTL_PSELT (A8F560), MUTL_PSEPG (B0KKZ7), MUTL_PSEPK (Q88DD1), MUTL_PSEPW (B1JAD6), MUTL_PSESM (Q87VJ2), MUTL_PSET1 (Q3IDU0), MUTL_PSYIN (A1SZL2), MUTL_RALN1 (Q8XWB1), MUTL_RHIE6 (B3PRD9), MUTL_RHIEC (Q2KBX7), MUTL_RHIJ3 (Q1MKU7), MUTL_RHILO (Q983L2), MUTL_RHILW (B5ZS00), MUTL_RHIME (Q92RP4), MUTL_RHIR8 (B9JA11), MUTL_RHIWR (A5V3J3), MUTL_RHOP2 (Q2ISE2), MUTL_RHOP5 (Q07RR2), MUTL_RHOPA (Q6N1N4), MUTL_RHOPB (Q219I5), MUTL_RHOPS (Q131I8), MUTL_RHOPT (B3Q7Y9), MUTL_RHORT (Q2RQ52), MUTL_RICAE (C3PM22), MUTL_RICAH (A8GQA9), MUTL_RICB8 (A8GY89), MUTL_RICBR (Q1RGP6), MUTL_RICCK (A8F0A4), MUTL_RICCN (Q92FW6), MUTL_RICFE (Q4UJQ1), MUTL_RICPR (Q9ZC88), MUTL_RICPU (C4K2Y5), MUTL_RICRO (B0BVP7), MUTL_RICRS (A8GU58), MUTL_RICTY (Q68VN4), MUTL_RIPO1 (B7JY11), MUTL_SALA4 (B5F385), MUTL_SALAR (A9MFP2), MUTL_SALCH (Q57GM1), MUTL_SALDC (B5FRM6), MUTL_SALEP (B5R0N7), MUTL_SALG2 (B5R9B7), MUTL_SALHS (B4TFA4), MUTL_SALNS (B4T2R5), MUTL_SALPA (Q5PL49), MUTL_SALPB (A9N4Y4), MUTL_SALPC (C0Q6C7), MUTL_SALPK (B5BKH9), MUTL_SALSV (B4TSF0), MUTL_SALTI (Q8Z187), MUTL_SALTY (P14161), MUTL_SERP5 (A8G8U7), MUTL_SHEAM (A1SA23), MUTL_SHEB5 (A3D022), MUTL_SHEB8 (A6WSV4), MUTL_SHEB9 (A9L3W1), MUTL_SHEDO (Q12J93), MUTL_SHEFN (Q07XW5), MUTL_SHEHH (B0TU66), MUTL_SHELP (A3QAD8), MUTL_SHEON (Q8EJ70), MUTL_SHEPA (A8H8G8), MUTL_SHEPW (B8CIX3), MUTL_SHESA (A0KSR5), MUTL_SHESH (A8FRD3), MUTL_SHESM (Q0HMP1), MUTL_SHESR (Q0HR40), MUTL_SHEWM (B1KHV0), MUTL_SHIB3 (B2TY45), MUTL_SHIBS (Q31TA0), MUTL_SHIDS (Q328E9), MUTL_SHIF8 (Q0SXB2), MUTL_SHIFL (Q83P35), MUTL_SHISS (Q3YUH3), MUTL_SHOC1 (Q5WFY4), MUTL_SINFN (C3MGW0), MUTL_SINMW (A6U6K5), MUTL_SOLUE (Q01QW7), MUTL_SPHAL (Q1GSN3), MUTL_STAA1 (A7X1T8), MUTL_STAA2 (A6U1B5), MUTL_STAA3 (Q2FHE2), MUTL_STAA8 (Q93T05), MUTL_STAAC (Q5HGD5), MUTL_STAAE (A6QGJ5), MUTL_STAAM (P65491), MUTL_STAAN (P65492), MUTL_STAAR (Q6GHD9), MUTL_STAAS (Q6G9R7), MUTL_STAAT (A8Z1W7), MUTL_STAAW (Q8NWX9), MUTL_STACT (B9DPC0), MUTL_STAEQ (Q5HPP4), MUTL_STAES (Q8CPE9), MUTL_STAS1 (Q49X89), MUTL_STRA1 (Q3JYM6), MUTL_STRA3 (Q8E2R5), MUTL_STRE4 (C0MAS4), MUTL_STREM (B4U0J7), MUTL_STRMU (Q8DRX0), MUTL_STRP1 (Q99XN7), MUTL_STRP2 (Q04MR4), MUTL_STRP3 (P0DC58), MUTL_STRP4 (B5E6C5), MUTL_STRP6 (Q5X9H5), MUTL_STRP8 (Q8NZ25), MUTL_STRPB (Q1J9C2), MUTL_STRPC (Q1JJH1), MUTL_STRPG (A2RGV3), MUTL_STRPI (B1I8F2), MUTL_STRPJ (B8ZKC9), MUTL_STRPQ (P0DC59), MUTL_STRPS (B2IS10), MUTL_STRPZ (B5XJ09), MUTL_STRS7 (C0MGC4), MUTL_STRT1 (Q5M1Y6), MUTL_STRT2 (Q5M6H7), MUTL_STRTD (Q03MY0), MUTL_STRU0 (B9DW70), MUTL_STRZJ (C1CBX8), MUTL_STRZP (C1CI68), MUTL_STRZT (C1CP43), MUTL_STUS1 (A4VQP2), MUTL_SYMTH (Q67NL0), MUTL_SYNAS (Q2LUR5), MUTL_SYNC1 (Q3A504), MUTL_SYNFM (A0LJK2), MUTL_SYNWW (Q0AYB2), MUTL_SYNY3 (P73349), MUTL_THEAB (B7IHA2), MUTL_THEM4 (A6LL30), MUTL_THEMA (P74925), MUTL_THENN (B9K7B8), MUTL_THEP3 (B0K9L6), MUTL_THEPX (B0K1A3), MUTL_THEYD (B5YIZ6), MUTL_THIDA (Q3SIQ5), MUTL_TOLAT (C4L9N1), MUTL_TREPA (O83325), MUTL_TRIL1 (B3E5Z2), MUTL_TRIV2 (Q3MEV6), MUTL_VIBC3 (A5F3L5), MUTL_VIBCH (Q9KV13), MUTL_VIBCM (C3LR77), MUTL_VIBPA (Q87L05), MUTL_VIBVU (Q8DCV0), MUTL_VIBVY (Q7MH01), MUTL_WOLTR (Q5GSP0), MUTL_WOLWR (C0R515), MUTL_XANAC (Q8PJX2), MUTL_XANC8 (Q4UVP3), MUTL_XANCB (B0RRZ8), MUTL_XANCP (Q8P8E4), MUTL_XANE5 (Q3BSD0), MUTL_XANOM (Q2P295), MUTL_XANOP (B2SHP8), MUTL_XANOR (Q5GZ85), MUTL_XYLF2 (B2I9E6), MUTL_XYLFA (Q9PFB8), MUTL_XYLFM (B0U5C6), MUTL_XYLFT (Q87AC9), MUTL_YERE8 (A1JIR3), MUTL_YERP3 (A7FMY1), MUTL_YERPA (Q1C0Z8), MUTL_YERPB (B2K202), MUTL_YERPE (Q8ZIW4), MUTL_YERPG (A9QYN3), MUTL_YERPN (Q1CEF3), MUTL_YERPP (A4TRP1), MUTL_YERPS (Q66FB7), MUTL_YERPY (B1JMP1), PM2P1_HUMAN (A4D2B8), PMS1_ARATH (Q941I6), PMS1_DICDI (Q54QA0), PMS1_HUMAN (P54277), PMS1_SCHPO (P54280), PMS1_YEAST (P14242), PMS2_CHICK (F1NQJ3), PMS2_HUMAN (P54278), PMS2_MOUSE (P54279)» more
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UniProtKB/Swiss-Prot False negative sequences |
10 sequences
MUTL_ANAD2 (B8J9F5), MUTL_ANADE (Q2IIL0), MUTL_ANASK (B4UCW3), MUTL_CYTH3 (Q11Z58), MUTL_MYXXD (Q1D568), MUTL_STRGC (A8AZU1), MUTL_STRSV (A3CR14), MUTL_THEAQ (P96082), MUTL_THET2 (Q72J22), MUTL_THET8 (Q9RA54)» more |
UniProtKB/Swiss-Prot False positive sequences |
3 sequences
S2542_HUMAN (Q86VD7), S2542_MOUSE (Q8R0Y8), S2542_RAT (P0C546) |
PDB [Detailed view] |
25 PDB
1B62; 1B63; 1BKN; 1EA6; 1H7S; 1H7U; 1NHH; 1NHI; 1NHJ; 3H4L; 4P7A; 5AKB; 5AKC; 5AKD; 5X9Y; 6LZI; 6LZJ; 6LZK; 6MFQ; 7AIB; 7AIC; 7P8V; 7RCB; 7RCI; 7RCK » more |