Entry: PS00077

General information about the entry

Entry name [info] COX1_CUB
Accession [info] PS00077
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); NOV-1997 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00074

Name and characterization of the entry

Description [info] Heme-copper oxidase catalytic subunit, copper B binding region signature.
Pattern [info]
[YWG]-[LIVFYWTA](2)-[VGS]-H-[LNP]-x-V-x(44,47)-H-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 231 in 231 different sequences
Number of true positive hits 231 in 231 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 5
Number of 'partial' sequences 13
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.88 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] copper at position 4
Site [info] copper at position 9
Site [info] copper at position 10
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
231 sequences

AI3_DEBHA   (A9RAH6), AI7_USTMA   (Q0H8Y2), AI8_USTMA   (Q0H8Y3), 
AOX1_AERPE  (Q9YDX6), COX13_THET8 (P98005), COX14_BRADU (P98057), 
COX1A_NOCFA (Q5YRP8), COX1A_PARDE (P08305), COX1A_STRAW (Q82AK9), 
COX1A_STRCO (Q9X813), COX1B_NOCFA (Q5Z0K2), COX1B_PARDE (P98002), 
COX1B_STRAW (Q828X4), COX1B_STRCO (Q9K451), COX1_ACACA  (Q37370), 
COX1_AEDAE  (B0FWC7), COX1_AEGCO  (P68540), COX1_ALBCA  (P48887), 
COX1_ALLMA  (P80440), COX1_AMICA  (P29643), COX1_ANOGA  (P34838), 
COX1_ANOQU  (P33504), COX1_APILI  (P20374), COX1_APTAU  (O03515), 
COX1_ARATH  (P60620), COX1_ARTSF  (Q37705), COX1_ASCSU  (P24881), 
COX1_ASHGO  (P62514), COX1_ATRSP  (P29644), COX1_BACP3  (P16262), 
COX1_BACPE  (Q04440), COX1_BACSU  (P24010), COX1_BALBO  (Q599A1), 
COX1_BALMU  (P41293), COX1_BALPH  (P24983), COX1_BETVU  (P24794), 
COX1_BLAGE  (Q36724), COX1_BOSIN  (Q6EMS9), COX1_BOSMU  (Q5Y4Q8), 
COX1_BOVIN  (P00396), COX1_BRADU  (P31833), COX1_BUTBU  (Q94WR7), 
COX1_CAEEL  (P24893), COX1_CANAL  (P0C8K9), COX1_CANFA  (Q9ZZ64), 
COX1_CANGA  (Q85QA3), COX1_CANLU  (Q1HKA1), COX1_CANSI  (Q33375), 
COX1_CARAU  (O78681), COX1_CASBE  (O03521), COX1_CERSI  (O03198), 
COX1_CHICK  (P18943), COX1_CHLRE  (P08681), COX1_CHOBI  (P50668), 
COX1_CHOCR  (P48866), COX1_CHOFU  (P50669), COX1_CHOOC  (P67793), 
COX1_CHOPI  (P67794), COX1_CHRKN  (Q9B229), COX1_COLPO  (O99041), 
COX1_CORDI  (Q6NFM3), COX1_COREF  (Q8FMT1), COX1_CORGL  (Q79VD7), 
COX1_COTJA  (P24984), COX1_CRANE  (Q6EGJ1), COX1_CRAZI  (Q6EGJ0), 
COX1_CRION  (P98003), COX1_CYACA  (P48867), COX1_CYPCA  (P24985), 
COX1_DANRE  (Q9MIY8), COX1_DASNO  (O21327), COX1_DEBHA  (A9RAH5), 
COX1_DICDI  (O21042), COX1_DIDVI  (P41310), COX1_DROMA  (Q34345), 
COX1_DROME  (P00399), COX1_DRONO  (O03524), COX1_DROSE  (Q34391), 
COX1_DROSI  (Q34388), COX1_DROYA  (P00400), COX1_DUGDU  (Q8W9N4), 
COX1_ELEMA  (Q2I3H2), COX1_EMEND  (P00402), COX1_EPHEQ  (Q33439), 
COX1_EQUAS  (P92477), COX1_FELCA  (P48888), COX1_FORLA  (P34188), 
COX1_GADMO  (Q36775), COX1_GEOBE  (Q6EGH9), COX1_GEOSD  (P29645), 
COX1_GEOTE  (Q6EGH8), COX1_HALGR  (P38595), COX1_HALSA  (P33518), 
COX1_HIPAM  (Q9ZZY9), COX1_HORSE  (P48659), COX1_HUMAN  (P00395), 
COX1_HYLLA  (Q7GEN7), COX1_KLULA  (P20386), COX1_LATCH  (O03167), 
COX1_LEITA  (P14544), COX1_LEMCA  (Q8LX30), COX1_LEPOC  (P29647), 
COX1_LOCMI  (Q36421), COX1_LOXAF  (Q9TA27), COX1_LUMTE  (Q34941), 
COX1_LYCSM  (O79548), COX1_MACRO  (P92661), COX1_MAIZE  (P08742), 
COX1_MAMPR  (Q38PS0), COX1_MARPO  (P26856), COX1_MEGAT  (P29648), 
COX1_METSE  (Q35101), COX1_MOUSE  (P00397), COX1_MYCBO  (P63853), 
COX1_MYCLE  (Q9CBQ5), COX1_MYCPA  (Q73VC3), COX1_MYCTO  (P9WP70), 
COX1_MYCTU  (P9WP71), COX1_MYTED  (P41774), COX1_MYXGL  (O21079), 
COX1_NEUCR  (P03945), COX1_NOTPE  (O03539), COX1_ONCMY  (P48170), 
COX1_ORNAN  (Q36452), COX1_ORTCH  (Q6EGI5), COX1_ORTGR  (Q6EGI2), 
COX1_ORTHI  (Q6EGI3), COX1_ORTUN  (Q6EGI4), COX1_ORYSJ  (P14578), 
COX1_OSTNU  (Q9B840), COX1_PANBU  (P29649), COX1_PANPA  (Q9T9X0), 
COX1_PANTR  (Q9T9W1), COX1_PAPBU  (Q6EGI0), COX1_PAPHA  (Q9ZXY2), 
COX1_PARLI  (P12700), COX1_PARTE  (P05489), COX1_PATPE  (Q33820), 
COX1_PECMA  (Q96000), COX1_PELSU  (O79672), COX1_PETMA  (Q35536), 
COX1_PHOVI  (Q00527), COX1_PHYME  (Q02211), COX1_PHYPO  (Q07434), 
COX1_PIG    (O79876), COX1_PISOC  (P25001), COX1_PLABE  (O99252), 
COX1_PLACH  (O99255), COX1_PLAFA  (Q02766), COX1_PODAN  (P20681), 
COX1_POLOR  (Q95911), COX1_POLSP  (P29650), COX1_POLSX  (P29651), 
COX1_POMNI  (P29652), COX1_PONAB  (P92692), COX1_PROWI  (Q05143), 
COX1_RABIT  (O79429), COX1_RAPSA  (P60621), COX1_RAT    (P05503), 
COX1_RHEAM  (O03546), COX1_RHILE  (Q08855), COX1_RHISA  (O99818), 
COX1_RHIUN  (Q96062), COX1_RHOCA  (P98059), COX1_RHOSH  (P33517), 
COX1_RICBR  (Q1RI42), COX1_RICCN  (Q92I67), COX1_RICFE  (Q4ULU5), 
COX1_RICPR  (O54069), COX1_SACPA  (P98001), COX1_SALSA  (Q9ZZM6), 
COX1_SALTR  (P29653), COX1_SCAPL  (P29654), COX1_SCHPO  (P07657), 
COX1_SCYCA  (O79403), COX1_SHEEP  (O78749), COX1_SORBI  (P05502), 
COX1_SQUAC  (Q9ZZ52), COX1_STRCA  (O21399), COX1_STRPU  (P15544), 
COX1_SYMSY  (Q34800), COX1_SYNY3  (Q06473), COX1_TETNG  (Q4JQI5), 
COX1_TETPY  (P11947), COX1_THEAN  (Q4UJ69), COX1_THET8  (Q5SJ79), 
COX1_THEVL  (P50676), COX1_TINMA  (O03554), COX1_TRIRU  (Q01555), 
COX1_TRYBB  (P04371), COX1_USTMA  (Q0H8Y4), COX1_VANPO  (A6H4Q6), 
COX1_WHEAT  (P68539), COX1_WICCA  (P48868), COX1_XENLA  (P00398), 
COX1_YEAST  (P00401), COX1_ZYGTR  (Q6EGH7), COXN_BRADU  (P98000), 
CYOB_BUCAI  (P57543), CYOB_BUCAP  (Q8K994), CYOB_BUCBP  (Q89AA4), 
CYOB_ECO57  (P0ABJ0), CYOB_ECOL6  (P0ABI9), CYOB_ECOLI  (P0ABI8), 
CYOB_PSEAE  (Q9I426), CYOB_PSEPU  (Q9WWR2), FIXN_AGRT7  (P98055), 
FIXN_AZOC5  (P98056), FIXN_BRADU  (Q03073), FIXN_RHIME  (Q05572), 
NORB_PSEAE  (Q59647), NORB_PSEST  (P98008), QOX1_ACEAC  (P98009), 
QOX1_BACPZ  (E0TW66), QOX1_BACSU  (P34956), QOX1_STAA3  (Q2FI18), 
QOX1_STAA8  (Q2FZK0), QOX1_STAAB  (Q2YX15), QOX1_STAAC  (Q5HH24), 
QOX1_STAAM  (Q99V37), QOX1_STAAN  (Q7A699), QOX1_STAAR  (Q6GI24), 
QOX1_STAAS  (Q6GAF3), QOX1_STAAW  (Q7A182), QOX1_STAEQ  (Q5HQB0), 
QOX1_STAES  (Q8CPP7), QOX1_STAHJ  (Q4L564), QOX1_STAS1  (Q49WI3), 
QOX1_SULAC  (P98004), QOXM_SULAC  (P39481), SCE4_YEAST  (Q9ZZX1)
» More

UniProtKB/Swiss-Prot
False negative sequences
5 sequences

COX1_OENBE  (P08743), COX1_PEA    (P12786), COX1_SOYBN  (P07506), 
COX1_THEPA  (Q36097), COX1_YARLI  (Q9B6E7)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
13 sequences

COX1_ALBTU  (Q09333), COX1_ANAPL  (P50656), COX1_CAPHI  (Q36347), 
COX1_CHORO  (P50671), COX1_DORPE  (Q8WEW4), COX1_GOMVA  (P29646), 
COX1_HAPMA  (Q9ZZ08), COX1_LOLFO  (Q9TGE6), COX1_OCTVU  (Q9G6J1), 
COX1_PLADA  (Q9TGD8), COX1_SEPOF  (Q8WEW3), COX1_SEPPH  (Q957T2), 
COX1_THETH  (Q56408)
» More

PDB
[Detailed view]
73 PDB

1AR1; 1EHK; 1FFT; 1M56; 1M57; 1OCC; 1OCO; 1OCR; 1OCZ; 1QLE; 1V54; 1V55; 1XME; 2DYR; 2DYS; 2EIJ; 2EIK; 2EIL; 2EIM; 2EIN; 2GSM; 2OCC; 2QPD; 2QPE; 2Y69; 2YBB; 2YEV; 2ZXW; 3ABK; 3ABL; 3ABM; 3AG1; 3AG2; 3AG3; 3AG4; 3ASN; 3ASO; 3BVD; 3DTU; 3EH3; 3EH4; 3EH5; 3EHB; 3FYE; 3FYI; 3HB3; 3O0R; 3QJQ; 3QJR; 3QJS; 3QJT; 3QJU; 3QJV; 3S33; 3S38; 3S39; 3S3A; 3S3B; 3S3C; 3S3D; 3S8F; 3S8G; 3WFB; 3WFC; 3WFD; 3WFE; 3WG7; 4FA7; 4FAA; 4GP4; 4GP5; 4GP8; 4N4Y
» More

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