PROSITE entry PS00088
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
PURL: https://purl.expasy.org/prosite/signature/PS00088
Direct ScanProsite submission
General information about the entry
| Entry name [info] | SOD_MN |
| Accession [info] | PS00088 |
| Entry type [info] | PATTERN |
| Date [info] |
01-APR-1990 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00083 |
Name and characterization of the entry
| Description [info] | Manganese and iron superoxide dismutases signature. |
| Pattern [info] |
D-x-[WF]-E-H-[STA]-[FY](2). |
Numerical results [info]
| Total number of hits | 212 in 212 different sequences |
| Number of true positive hits | 212 in 212 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 4 |
| Number of 'partial' sequences | 31 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 98.15 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | manganese at position 1 |
| Site [info] | manganese at position 5 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
212 sequences
SODB_ASPNG (Q3MSU9), SODF1_ARATH (P21276), SODF1_ORYSJ (Q5VRL3), SODF2_ARATH (Q9LU64), SODF2_ORYSJ (Q5VSB7), SODF3_ARATH (Q9FMX0), SODF_ACIAM (Q9P9L3), SODF_AERPE (Q9Y8H8), SODF_BABBO (O15905), SODF_BACFR (P53638), SODF_BACSU (O35023), SODF_BORPE (P37369), SODF_BURSP (D3KVM5), SODF_CAMCO (P53639), SODF_CAMJE (Q0PBW9), SODF_CAMJJ (A1VXQ2), SODF_COXBU (P19685), SODF_ECO57 (P0AGD5), SODF_ECOL6 (P0AGD4), SODF_ECOLI (P0AGD3), SODF_ENTH1 (P34107), SODF_HELPJ (Q9ZKE6), SODF_HELPY (P43312), SODF_LEGPH (P31108), SODF_LEPBY (P50061), SODF_METJ (P23744), SODF_METTH (P18868), SODF_METTM (Q60036), SODF_MYCBO (Q7TVI9), SODF_MYCTO (P9WGE6), SODF_MYCTU (P9WGE7), SODF_NICPL (P22302), SODF_NOSS1 (Q8YSZ1), SODF_PHOLE (P09213), SODF_PLAF7 (Q8IAY6), SODF_PLAFA (Q9TW89), SODF_PLAFX (Q27740), SODF_PLAVI (Q9Y1A9), SODF_PORGI (P19665), SODF_PSEAE (P53641), SODF_PSEPK (Q88PD5), SODF_PSEPU (P09223), SODF_PSET1 (P84612), SODF_PYRAE (O93724), SODF_RHIME (Q9XD74), SODF_RHOCA (O30970), SODF_RICBR (Q1RH88), SODF_RICCN (Q92HJ3), SODF_RICFE (Q4ULI1), SODF_RICPR (Q9ZD15), SODF_RICTY (Q68WK0), SODF_SACS2 (P80857), SODF_SALTI (P0A2F5), SODF_SALTY (P0A2F4), SODF_SHIFL (P0AGD6), SODF_SOYBN (P28759), SODF_STRCO (O51917), SODF_SULAC (Q08713), SODF_SYNE7 (P18655), SODF_SYNY3 (P77968), SODF_TETPY (P19666), SODM1_ARATH (O81235), SODM1_BACAN (Q81LW0), SODM1_BACCR (Q818I1), SODM1_CAEEL (P31161), SODM1_HALME (O08461), SODM1_HALSA (P09737), SODM1_HALVD (Q03300), SODM1_LEPBY (P50058), SODM1_MAIZE (P09233), SODM1_STAA3 (Q2FGH0), SODM1_STAA8 (P0A0J3), SODM1_STAAB (Q2YT26), SODM1_STAAC (Q5HFK7), SODM1_STAAM (P0A0J1), SODM1_STAAN (P99098), SODM1_STAAR (Q6GGE6), SODM1_STAAS (Q6G913), SODM1_STAAW (P0A0J2), SODM2_ARATH (Q9LYK8), SODM2_BACAN (Q81JK8), SODM2_BACCR (Q814I6), SODM2_CAEEL (P41977), SODM2_HALME (O08460), SODM2_HALSA (P09224), SODM2_HALVD (Q03301), SODM2_LEPBY (P50059), SODM2_MAIZE (P41978), SODM2_STAA3 (Q2FKC6), SODM2_STAA8 (Q2G261), SODM2_STAAB (Q2YUU9), SODM2_STAAC (Q5HJN5), SODM2_STAAM (P66830), SODM2_STAAN (P66831), SODM2_STAAR (Q6GKH2), SODM2_STAAS (Q6GCZ1), SODM2_STAAW (P66832), SODM3_LEPBY (P50060), SODM3_MAIZE (P41979), SODM4_MAIZE (P41980), SODM_ACIAD (Q59094), SODM_AGABI (Q9P4T6), SODM_ASPFU (Q92450), SODM_ASPOR (Q877B6), SODM_BACCA (P28760), SODM_BACSU (P54375), SODM_BORBU (O30563), SODM_BORPE (P53642), SODM_BOVIN (P41976), SODM_BUCAI (P57286), SODM_BUCAP (Q8K9V4), SODM_BUCBP (Q89AR7), SODM_CALJA (Q8HXP0), SODM_CANAX (O13401), SODM_CAPAN (O49066), SODM_CAVPO (P49114), SODM_CHAFE (O96347), SODM_CHLMU (Q9PKA0), SODM_CHLPN (Q9Z9C4), SODM_CHLRE (Q42684), SODM_CHLTR (O84296), SODM_CORDI (P42821), SODM_CRYNH (J9VWW9), SODM_DEBHA (Q6BQZ1), SODM_DEIRA (Q9RUV2), SODM_DICDI (Q55BJ9), SODM_DROME (Q00637), SODM_ECO57 (P66828), SODM_ECOLI (P00448), SODM_ENTFA (Q838I4), SODM_GANMI (Q92429), SODM_GEOSE (P00449), SODM_GLOMM (Q694A3), SODM_HAEDU (O30826), SODM_HAEIN (P43725), SODM_HALH5 (Q9KD10), SODM_HALHI (O08459), SODM_HALMA (Q03302), SODM_HEVBR (P35017), SODM_HORSE (Q9XS41), SODM_HUMAN (P04179), SODM_HYLLA (Q8HXP5), SODM_LACLA (P0A4J1), SODM_LACLM (P0A4J2), SODM_LISIN (Q92BR6), SODM_LISIV (P28763), SODM_LISMO (P28764), SODM_MACFA (Q8HXP3), SODM_MACFU (Q8HXP4), SODM_MACMU (Q8HXP2), SODM_MACNE (Q5FB30), SODM_MANHA (Q59679), SODM_MOUSE (P09671), SODM_MYCAV (P47201), SODM_MYCFO (Q59519), SODM_MYCIA (P46728), SODM_MYCKA (P50912), SODM_MYCLE (P13367), SODM_MYCLP (O86165), SODM_MYCPA (P53647), SODM_MYCS2 (A0R652), SODM_MYCSC (P50913), SODM_MYCSM (P53649), SODM_NEUCR (Q9Y783), SODM_NICPL (P11796), SODM_NOCAS (P53651), SODM_ONCVO (P41981), SODM_ORYSJ (Q43008), SODM_PANTR (Q8HXP7), SODM_PASMU (Q9CPN6), SODM_PEA(P27084), SODM_PENCH (O75007), SODM_PONPY (Q8HXP6), SODM_PROFR (P80293), SODM_PRUPE (Q9SM64), SODM_PSEAE (P53652), SODM_PSEPU (P77929), SODM_RABIT (P41982), SODM_RAOPL (P22799), SODM_RAT(P07895), SODM_SALTI (Q8Z2V9), SODM_SALTY (P43019), SODM_SAPAP (Q8HXP1), SODM_SCHPO (Q9UQX0), SODM_SHIFL (P66829), SODM_STACA (Q9F326), SODM_STAEP (Q8VQ15), SODM_STAEQ (Q5HNZ5), SODM_STAES (P0C0Q6), SODM_STAHJ (Q4L6Q3), SODM_STAS1 (Q49XZ6), SODM_STAXY (Q9K4V3), SODM_STRA3 (P0A4J3), SODM_STRA5 (P0A4J4), SODM_STRAG (P0A4J5), SODM_STRMU (P09738), SODM_STRP1 (P0C0I1), SODM_STRP3 (P0DF72), SODM_STRP6 (Q5XBF8), SODM_STRP8 (Q8P0D4), SODM_STRPN (P0A4J6), SODM_STRPQ (P0DF73), SODM_STRPY (P0C0I0), SODM_STRR6 (P0A4J7), SODM_THEAQ (P53653), SODM_THET2 (P61502), SODM_THET8 (P61503), SODM_VIRHA (Q7SIC3), SODM_XANC8 (P0C0F9), SODM_XANCP (P0C0F8), SODM_YEAST (P00447), SODM_YEREN (P53655)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
4 sequences
SODF_AQUAE (O67470), SODF_AQUPY (Q9X6W9), SODF_PLAMA (Q9Y1B0), SODM_CUPMC (P17550)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
31 sequences
SODF_ANASL (P83157), SODM_ALTAL (P86254), SODM_APOCL (P28766), SODM_AQUCT (P36215), SODM_ARTDA (P83289), SODM_BACCE (P83076), SODM_BRAFL (P28761), SODM_CANLF (P54712), SODM_DESDE (P11419), SODM_EPTST (P28762), SODM_HORVU (P28524), SODM_MYCCE (P53643), SODM_MYCCH (P53644), SODM_MYCMA (P53645), SODM_MYCMR (P53646), SODM_MYCPH (P53648), SODM_MYCSI (P80582), SODM_MYCSZ (P53650), SODM_PALVU (P28765), SODM_PETMA (P28767), SODM_PIG(P28768), SODM_STRAI (O33603), SODM_STRAY (O33605), SODM_STRCB (O54210), SODM_STRGR (P80733), SODM_STRIN (O54233), SODM_STRMT (O33686), SODM_STROR (O54263), SODM_STRPA (O33756), SODM_STRPO (O54266), SODM_STRSL (O33783)» more |
| PDB [Detailed view] |
140 PDB
pdb_00001ap5; pdb_00001ap6; pdb_00001ar4; pdb_00001ar5; pdb_00001avm; pdb_00001b06; pdb_00001bs3; pdb_00001bsm; pdb_00001bt8; pdb_00001d5n; pdb_00001dt0; pdb_00001em1; pdb_00001en4; pdb_00001en5; pdb_00001en6; pdb_00001gn2; pdb_00001gn3; pdb_00001gn4; pdb_00001gn6; pdb_00001i08; pdb_00001i0h; pdb_00001ids; pdb_00001isa; pdb_00001isb; pdb_00001isc; pdb_00001ix9; pdb_00001ixb; pdb_00001jr9; pdb_00001kkc; pdb_00001luv; pdb_00001luw; pdb_00001ma1; pdb_00001mmm; pdb_00001mng; pdb_00001msd; pdb_00001n0j; pdb_00001n0n; pdb_00001p7g; pdb_00001pl4; pdb_00001pm9; pdb_00001qnm; pdb_00001qnn; pdb_00001szx; pdb_00001uer; pdb_00001ues; pdb_00001var; pdb_00001vew; pdb_00001wb7; pdb_00001wb8; pdb_00001xdc; pdb_00001xil; pdb_00001xre; pdb_00001xuq; pdb_00001y67; pdb_00001za5; pdb_00001zlz; pdb_00001zsp; pdb_00001zte; pdb_00001zuq; pdb_00002adp; pdb_00002adq; pdb_00002aw9; pdb_00002bkb; pdb_00002bpi; pdb_00002cdy; pdb_00002ce4; pdb_00002gds; pdb_00002goj; pdb_00002nyb; pdb_00002p4k; pdb_00002qka; pdb_00002qkc; pdb_00002rcv; pdb_00003ak1; pdb_00003ak2; pdb_00003ak3; pdb_00003bfr; pdb_00003cei; pdb_00003dc5; pdb_00003dc6; pdb_00003evk; pdb_00003k9s; pdb_00003kky; pdb_00003lio; pdb_00003lj9; pdb_00003ljf; pdb_00003lsu; pdb_00003mds; pdb_00003ot7; pdb_00003rn4; pdb_00003sdp; pdb_00003tqj; pdb_00004c7u; pdb_00004e4e; pdb_00004f6e; pdb_00004l2a; pdb_00004l2b; pdb_00004l2c; pdb_00004l2d; pdb_00004x9q; pdb_00004yip; pdb_00005ag2; pdb_00005gxo; pdb_00005n56; pdb_00005n57; pdb_00005t30; pdb_00005vf9; pdb_00006elk; pdb_00006ex3; pdb_00006ex4; pdb_00006ex5; pdb_00006pro; pdb_00006qv8; pdb_00006qv9; pdb_00006qzm; pdb_00006qzn; pdb_00006s0d; pdb_00007azq; pdb_00007azr; pdb_00007bjk; pdb_00007kks; pdb_00007kku; pdb_00007kkw; pdb_00007klb; pdb_00008avl; pdb_00008avm; pdb_00008kb3; pdb_00008sks; pdb_00008vhw; pdb_00008vhy; pdb_00008vj0; pdb_00008vj4; pdb_00008vj5; pdb_00008vj8; pdb_00008y17; pdb_00009bvy; pdb_00009bw2; pdb_00009bwm; pdb_00009bwq; pdb_00009bwr » more |