Entry: PS00088

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General information about the entry

Entry name [info] SOD_MN
Accession [info] PS00088
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00083

Name and characterization of the entry

Description [info] Manganese and iron superoxide dismutases signature.
Pattern [info]
D-x-[WF]-E-H-[STA]-[FY](2).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 210 in 210 different sequences
Number of true positive hits 210 in 210 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 4
Number of 'partial' sequences 31
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.13 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] manganese at position 1
Site [info] manganese at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
210 sequences

SODB_ASPNG  (Q3MSU9), SODF1_ARATH (P21276), SODF1_ORYSJ (Q5VRL3), 
SODF2_ARATH (Q9LU64), SODF2_ORYSJ (Q5VSB7), SODF3_ARATH (Q9FMX0), 
SODF_ACIAM  (Q9P9L3), SODF_AERPE  (Q9Y8H8), SODF_BABBO  (O15905), 
SODF_BACFR  (P53638), SODF_BACSU  (O35023), SODF_BORPE  (P37369), 
SODF_CAMCO  (P53639), SODF_CAMJE  (Q0PBW9), SODF_CAMJJ  (A1VXQ2), 
SODF_COXBU  (P19685), SODF_ECO57  (P0AGD5), SODF_ECOL6  (P0AGD4), 
SODF_ECOLI  (P0AGD3), SODF_ENTHI  (P34107), SODF_HELPJ  (Q9ZKE6), 
SODF_HELPY  (P43312), SODF_LEGPH  (P31108), SODF_LEPBY  (P50061), 
SODF_METJ   (P23744), SODF_METTH  (P18868), SODF_METTM  (Q60036), 
SODF_MYCBO  (Q7TVI9), SODF_MYCTO  (P9WGE6), SODF_MYCTU  (P9WGE7), 
SODF_NICPL  (P22302), SODF_NOSS1  (Q8YSZ1), SODF_PHOLE  (P09213), 
SODF_PLAF7  (Q8IAY6), SODF_PLAFA  (Q9TW89), SODF_PLAFX  (Q27740), 
SODF_PLAVI  (Q9Y1A9), SODF_PORGI  (P19665), SODF_PSEAE  (P53641), 
SODF_PSEHT  (P84612), SODF_PSEPK  (Q88PD5), SODF_PSEPU  (P09223), 
SODF_PYRAE  (O93724), SODF_RHIME  (Q9XD74), SODF_RHOCA  (O30970), 
SODF_RICBR  (Q1RH88), SODF_RICCN  (Q92HJ3), SODF_RICFE  (Q4ULI1), 
SODF_RICPR  (Q9ZD15), SODF_RICTY  (Q68WK0), SODF_SALTI  (P0A2F5), 
SODF_SALTY  (P0A2F4), SODF_SHIFL  (P0AGD6), SODF_SOYBN  (P28759), 
SODF_STRCO  (O51917), SODF_SULAC  (Q08713), SODF_SULSO  (P80857), 
SODF_SYNE7  (P18655), SODF_SYNY3  (P77968), SODF_TETPY  (P19666), 
SODM1_ARATH (O81235), SODM1_BACAN (Q81LW0), SODM1_BACCR (Q818I1), 
SODM1_CAEEL (P31161), SODM1_HALME (O08461), SODM1_HALSA (P09737), 
SODM1_HALVD (Q03300), SODM1_LEPBY (P50058), SODM1_MAIZE (P09233), 
SODM1_STAA3 (Q2FGH0), SODM1_STAA8 (P0A0J3), SODM1_STAAB (Q2YT26), 
SODM1_STAAC (Q5HFK7), SODM1_STAAM (P0A0J1), SODM1_STAAN (P99098), 
SODM1_STAAR (Q6GGE6), SODM1_STAAS (Q6G913), SODM1_STAAW (P0A0J2), 
SODM2_ARATH (Q9LYK8), SODM2_BACAN (Q81JK8), SODM2_BACCR (Q814I6), 
SODM2_CAEEL (P41977), SODM2_HALME (O08460), SODM2_HALSA (P09224), 
SODM2_HALVD (Q03301), SODM2_LEPBY (P50059), SODM2_MAIZE (P41978), 
SODM2_STAA3 (Q2FKC6), SODM2_STAA8 (Q2G261), SODM2_STAAB (Q2YUU9), 
SODM2_STAAC (Q5HJN5), SODM2_STAAM (P66830), SODM2_STAAN (P66831), 
SODM2_STAAR (Q6GKH2), SODM2_STAAS (Q6GCZ1), SODM2_STAAW (P66832), 
SODM3_LEPBY (P50060), SODM3_MAIZE (P41979), SODM4_MAIZE (P41980), 
SODM_ACIAD  (Q59094), SODM_AGABI  (Q9P4T6), SODM_ASPFU  (Q92450), 
SODM_ASPOR  (Q877B6), SODM_BACCA  (P28760), SODM_BACHD  (Q9KD10), 
SODM_BACSU  (P54375), SODM_BORBU  (O30563), SODM_BORPE  (P53642), 
SODM_BOVIN  (P41976), SODM_BUCAI  (P57286), SODM_BUCAP  (Q8K9V4), 
SODM_BUCBP  (Q89AR7), SODM_CALJA  (Q8HXP0), SODM_CANAX  (O13401), 
SODM_CAPAN  (O49066), SODM_CAVPO  (P49114), SODM_CHAFE  (O96347), 
SODM_CHLMU  (Q9PKA0), SODM_CHLPN  (Q9Z9C4), SODM_CHLRE  (Q42684), 
SODM_CHLTR  (O84296), SODM_CORDI  (P42821), SODM_DEBHA  (Q6BQZ1), 
SODM_DEIRA  (Q9RUV2), SODM_DICDI  (Q55BJ9), SODM_DROME  (Q00637), 
SODM_ECO57  (P66828), SODM_ECOLI  (P00448), SODM_ENTFA  (Q838I4), 
SODM_GANMI  (Q92429), SODM_GEOSE  (P00449), SODM_GLOMM  (Q694A3), 
SODM_HAEDU  (O30826), SODM_HAEIN  (P43725), SODM_HALHI  (O08459), 
SODM_HALMA  (Q03302), SODM_HEVBR  (P35017), SODM_HORSE  (Q9XS41), 
SODM_HUMAN  (P04179), SODM_HYLLA  (Q8HXP5), SODM_LACLA  (P0A4J1), 
SODM_LACLM  (P0A4J2), SODM_LISIN  (Q92BR6), SODM_LISIV  (P28763), 
SODM_LISMO  (P28764), SODM_MACFA  (Q8HXP3), SODM_MACFU  (Q8HXP4), 
SODM_MACMU  (Q8HXP2), SODM_MACNE  (Q5FB30), SODM_MOUSE  (P09671), 
SODM_MYCAV  (P47201), SODM_MYCFO  (Q59519), SODM_MYCIA  (P46728), 
SODM_MYCKA  (P50912), SODM_MYCLE  (P13367), SODM_MYCLP  (O86165), 
SODM_MYCPA  (P53647), SODM_MYCS2  (A0R652), SODM_MYCSC  (P50913), 
SODM_MYCSM  (P53649), SODM_NEUCR  (Q9Y783), SODM_NICPL  (P11796), 
SODM_NOCAS  (P53651), SODM_ONCVO  (P41981), SODM_ORYSJ  (Q43008), 
SODM_PANTR  (Q8HXP7), SODM_PASHA  (Q59679), SODM_PASMU  (Q9CPN6), 
SODM_PEA    (P27084), SODM_PENCH  (O75007), SODM_PONPY  (Q8HXP6), 
SODM_PROFR  (P80293), SODM_PRUPE  (Q9SM64), SODM_PSEAE  (P53652), 
SODM_PSEPU  (P77929), SODM_RABIT  (P41982), SODM_RAOPL  (P22799), 
SODM_RAT    (P07895), SODM_SALTI  (Q8Z2V9), SODM_SALTY  (P43019), 
SODM_SAPAP  (Q8HXP1), SODM_SCHPO  (Q9UQX0), SODM_SHIFL  (P66829), 
SODM_STACA  (Q9F326), SODM_STAEP  (Q8VQ15), SODM_STAEQ  (Q5HNZ5), 
SODM_STAES  (P0C0Q6), SODM_STAHJ  (Q4L6Q3), SODM_STAS1  (Q49XZ6), 
SODM_STAXY  (Q9K4V3), SODM_STRA3  (P0A4J3), SODM_STRA5  (P0A4J4), 
SODM_STRAG  (P0A4J5), SODM_STRMU  (P09738), SODM_STRP1  (P0C0I1), 
SODM_STRP3  (P0DF72), SODM_STRP6  (Q5XBF8), SODM_STRP8  (Q8P0D4), 
SODM_STRPN  (P0A4J6), SODM_STRPQ  (P0DF73), SODM_STRPY  (P0C0I0), 
SODM_STRR6  (P0A4J7), SODM_THEAQ  (P53653), SODM_THET2  (P61502), 
SODM_THET8  (P61503), SODM_VIRHA  (Q7SIC3), SODM_XANC8  (P0C0F9), 
SODM_XANCP  (P0C0F8), SODM_YEAST  (P00447), SODM_YEREN  (P53655)
» More

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

SODF_AQUAE  (O67470), SODF_AQUPY  (Q9X6W9), SODF_PLAMA  (Q9Y1B0), 
SODM_RALME  (P17550)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
31 sequences

SODF_ANASL  (P83157), SODM_ALTAL  (P86254), SODM_ARTDA  (P83289), 
SODM_BACCE  (P83076), SODM_BRAFL  (P28761), SODM_CANFA  (P54712), 
SODM_DESDE  (P11419), SODM_EPTST  (P28762), SODM_HORVU  (P28524), 
SODM_LITCT  (P36215), SODM_MYCCE  (P53643), SODM_MYCCH  (P53644), 
SODM_MYCMA  (P53645), SODM_MYCMR  (P53646), SODM_MYCPH  (P53648), 
SODM_MYCSI  (P80582), SODM_MYCSZ  (P53650), SODM_PALVU  (P28765), 
SODM_PARCL  (P28766), SODM_PETMA  (P28767), SODM_PIG    (P28768), 
SODM_STRAI  (O33603), SODM_STRAY  (O33605), SODM_STRCB  (O54210), 
SODM_STRGR  (P80733), SODM_STRIN  (O54233), SODM_STRMT  (O33686), 
SODM_STROR  (O54263), SODM_STRPA  (O33756), SODM_STRPO  (O54266), 
SODM_STRSL  (O33783)
» More

PDB
[Detailed view]
96 PDB

1AP5; 1AP6; 1AR4; 1AR5; 1AVM; 1B06; 1BS3; 1BSM; 1BT8; 1D5N; 1DT0; 1EM1; 1EN4; 1EN5; 1EN6; 1GN2; 1GN3; 1GN4; 1GN6; 1I08; 1I0H; 1IDS; 1ISA; 1ISB; 1ISC; 1IX9; 1IXB; 1JR9; 1KKC; 1LUV; 1LUW; 1MA1; 1MMM; 1MNG; 1MSD; 1N0J; 1N0N; 1P7G; 1PL4; 1PM9; 1QNM; 1QNN; 1SZX; 1UER; 1UES; 1VAR; 1VEW; 1WB7; 1WB8; 1XRE; 1XUQ; 1Y67; 1ZA5; 1ZLZ; 1ZSP; 1ZTE; 1ZUQ; 2ADP; 2ADQ; 2AW9; 2BKB; 2BPI; 2CDY; 2CE4; 2GDS; 2GOJ; 2NYB; 2P4K; 2QKA; 2QKC; 2RCV; 3AK1; 3AK2; 3AK3; 3BFR; 3CEI; 3DC5; 3DC6; 3EVK; 3K9S; 3KKY; 3LIO; 3LJ9; 3LJF; 3LSU; 3MDS; 3OT7; 3RN4; 3SDP; 3TQJ; 4E4E; 4F6E; 4L2A; 4L2B; 4L2C; 4L2D
» More

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