Entry: PS00088

General information about the entry

Entry name [info] SOD_MN
Accession [info] PS00088
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00083

Name and characterization of the entry

Description [info] Manganese and iron superoxide dismutases signature.
Pattern [info]
D-x-[WF]-E-H-[STA]-[FY](2).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 210 in 210 different sequences
Number of true positive hits 210 in 210 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 31
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.13 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] manganese at position 1
Site [info] manganese at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
210 sequences

SODB_ASPNG  (Q3MSU9    ), SODF1_ARATH (P21276    ), SODF1_ORYSJ (Q5VRL3    ), 
SODF2_ARATH (Q9LU64    ), SODF2_ORYSJ (Q5VSB7    ), SODF3_ARATH (Q9FMX0    ), 
SODF_ACIAM  (Q9P9L3    ), SODF_AERPE  (Q9Y8H8    ), SODF_BABBO  (O15905    ), 
SODF_BACFR  (P53638    ), SODF_BACSU  (O35023    ), SODF_BORPE  (P37369    ), 
SODF_CAMCO  (P53639    ), SODF_CAMJE  (Q0PBW9    ), SODF_CAMJJ  (A1VXQ2    ), 
SODF_COXBU  (P19685    ), SODF_ECO57  (P0AGD5    ), SODF_ECOL6  (P0AGD4    ), 
SODF_ECOLI  (P0AGD3    ), SODF_ENTHI  (P34107    ), SODF_HELPJ  (Q9ZKE6    ), 
SODF_HELPY  (P43312    ), SODF_LEGPH  (P31108    ), SODF_LEPBY  (P50061    ), 
SODF_METJ   (P23744    ), SODF_METTH  (P18868    ), SODF_METTM  (Q60036    ), 
SODF_MYCBO  (Q7TVI9    ), SODF_MYCTO  (P9WGE6    ), SODF_MYCTU  (P9WGE7    ), 
SODF_NICPL  (P22302    ), SODF_NOSS1  (Q8YSZ1    ), SODF_PHOLE  (P09213    ), 
SODF_PLAF7  (Q8IAY6    ), SODF_PLAFA  (Q9TW89    ), SODF_PLAFX  (Q27740    ), 
SODF_PLAVI  (Q9Y1A9    ), SODF_PORGI  (P19665    ), SODF_PSEAE  (P53641    ), 
SODF_PSEHT  (P84612    ), SODF_PSEPK  (Q88PD5    ), SODF_PSEPU  (P09223    ), 
SODF_PYRAE  (O93724    ), SODF_RHIME  (Q9XD74    ), SODF_RHOCA  (O30970    ), 
SODF_RICBR  (Q1RH88    ), SODF_RICCN  (Q92HJ3    ), SODF_RICFE  (Q4ULI1    ), 
SODF_RICPR  (Q9ZD15    ), SODF_RICTY  (Q68WK0    ), SODF_SALTI  (P0A2F5    ), 
SODF_SALTY  (P0A2F4    ), SODF_SHIFL  (P0AGD6    ), SODF_SOYBN  (P28759    ), 
SODF_STRCO  (O51917    ), SODF_SULAC  (Q08713    ), SODF_SULSO  (P80857    ), 
SODF_SYNE7  (P18655    ), SODF_SYNY3  (P77968    ), SODF_TETPY  (P19666    ), 
SODM1_ARATH (O81235    ), SODM1_BACAN (Q81LW0    ), SODM1_BACCR (Q818I1    ), 
SODM1_CAEEL (P31161    ), SODM1_HALME (O08461    ), SODM1_HALSA (P09737    ), 
SODM1_HALVD (Q03300    ), SODM1_LEPBY (P50058    ), SODM1_MAIZE (P09233    ), 
SODM1_STAA3 (Q2FGH0    ), SODM1_STAA8 (P0A0J3    ), SODM1_STAAB (Q2YT26    ), 
SODM1_STAAC (Q5HFK7    ), SODM1_STAAM (P0A0J1    ), SODM1_STAAN (P99098    ), 
SODM1_STAAR (Q6GGE6    ), SODM1_STAAS (Q6G913    ), SODM1_STAAW (P0A0J2    ), 
SODM2_ARATH (Q9LYK8    ), SODM2_BACAN (Q81JK8    ), SODM2_BACCR (Q814I6    ), 
SODM2_CAEEL (P41977    ), SODM2_HALME (O08460    ), SODM2_HALSA (P09224    ), 
SODM2_HALVD (Q03301    ), SODM2_LEPBY (P50059    ), SODM2_MAIZE (P41978    ), 
SODM2_STAA3 (Q2FKC6    ), SODM2_STAA8 (Q2G261    ), SODM2_STAAB (Q2YUU9    ), 
SODM2_STAAC (Q5HJN5    ), SODM2_STAAM (P66830    ), SODM2_STAAN (P66831    ), 
SODM2_STAAR (Q6GKH2    ), SODM2_STAAS (Q6GCZ1    ), SODM2_STAAW (P66832    ), 
SODM3_LEPBY (P50060    ), SODM3_MAIZE (P41979    ), SODM4_MAIZE (P41980    ), 
SODM_ACIAD  (Q59094    ), SODM_AGABI  (Q9P4T6    ), SODM_ASPFU  (Q92450    ), 
SODM_ASPOR  (Q877B6    ), SODM_BACCA  (P28760    ), SODM_BACHD  (Q9KD10    ), 
SODM_BACSU  (P54375    ), SODM_BORBU  (O30563    ), SODM_BORPE  (P53642    ), 
SODM_BOVIN  (P41976    ), SODM_BUCAI  (P57286    ), SODM_BUCAP  (Q8K9V4    ), 
SODM_BUCBP  (Q89AR7    ), SODM_CALJA  (Q8HXP0    ), SODM_CANAX  (O13401    ), 
SODM_CAPAN  (O49066    ), SODM_CAVPO  (P49114    ), SODM_CHAFE  (O96347    ), 
SODM_CHLMU  (Q9PKA0    ), SODM_CHLPN  (Q9Z9C4    ), SODM_CHLRE  (Q42684    ), 
SODM_CHLTR  (O84296    ), SODM_CORDI  (P42821    ), SODM_DEBHA  (Q6BQZ1    ), 
SODM_DEIRA  (Q9RUV2    ), SODM_DICDI  (Q55BJ9    ), SODM_DROME  (Q00637    ), 
SODM_ECO57  (P66828    ), SODM_ECOLI  (P00448    ), SODM_ENTFA  (Q838I4    ), 
SODM_GANMI  (Q92429    ), SODM_GEOSE  (P00449    ), SODM_GLOMM  (Q694A3    ), 
SODM_HAEDU  (O30826    ), SODM_HAEIN  (P43725    ), SODM_HALHI  (O08459    ), 
SODM_HALMA  (Q03302    ), SODM_HEVBR  (P35017    ), SODM_HORSE  (Q9XS41    ), 
SODM_HUMAN  (P04179    ), SODM_HYLLA  (Q8HXP5    ), SODM_LACLA  (P0A4J1    ), 
SODM_LACLM  (P0A4J2    ), SODM_LISIN  (Q92BR6    ), SODM_LISIV  (P28763    ), 
SODM_LISMO  (P28764    ), SODM_MACFA  (Q8HXP3    ), SODM_MACFU  (Q8HXP4    ), 
SODM_MACMU  (Q8HXP2    ), SODM_MACNE  (Q5FB30    ), SODM_MANHA  (Q59679    ), 
SODM_MOUSE  (P09671    ), SODM_MYCAV  (P47201    ), SODM_MYCFO  (Q59519    ), 
SODM_MYCIA  (P46728    ), SODM_MYCKA  (P50912    ), SODM_MYCLE  (P13367    ), 
SODM_MYCLP  (O86165    ), SODM_MYCPA  (P53647    ), SODM_MYCS2  (A0R652    ), 
SODM_MYCSC  (P50913    ), SODM_MYCSM  (P53649    ), SODM_NEUCR  (Q9Y783    ), 
SODM_NICPL  (P11796    ), SODM_NOCAS  (P53651    ), SODM_ONCVO  (P41981    ), 
SODM_ORYSJ  (Q43008    ), SODM_PANTR  (Q8HXP7    ), SODM_PASMU  (Q9CPN6    ), 
SODM_PEA    (P27084    ), SODM_PENCH  (O75007    ), SODM_PONPY  (Q8HXP6    ), 
SODM_PROFR  (P80293    ), SODM_PRUPE  (Q9SM64    ), SODM_PSEAE  (P53652    ), 
SODM_PSEPU  (P77929    ), SODM_RABIT  (P41982    ), SODM_RAOPL  (P22799    ), 
SODM_RAT    (P07895    ), SODM_SALTI  (Q8Z2V9    ), SODM_SALTY  (P43019    ), 
SODM_SAPAP  (Q8HXP1    ), SODM_SCHPO  (Q9UQX0    ), SODM_SHIFL  (P66829    ), 
SODM_STACA  (Q9F326    ), SODM_STAEP  (Q8VQ15    ), SODM_STAEQ  (Q5HNZ5    ), 
SODM_STAES  (P0C0Q6    ), SODM_STAHJ  (Q4L6Q3    ), SODM_STAS1  (Q49XZ6    ), 
SODM_STAXY  (Q9K4V3    ), SODM_STRA3  (P0A4J3    ), SODM_STRA5  (P0A4J4    ), 
SODM_STRAG  (P0A4J5    ), SODM_STRMU  (P09738    ), SODM_STRP1  (P0C0I1    ), 
SODM_STRP3  (P0DF72    ), SODM_STRP6  (Q5XBF8    ), SODM_STRP8  (Q8P0D4    ), 
SODM_STRPN  (P0A4J6    ), SODM_STRPQ  (P0DF73    ), SODM_STRPY  (P0C0I0    ), 
SODM_STRR6  (P0A4J7    ), SODM_THEAQ  (P53653    ), SODM_THET2  (P61502    ), 
SODM_THET8  (P61503    ), SODM_VIRHA  (Q7SIC3    ), SODM_XANC8  (P0C0F9    ), 
SODM_XANCP  (P0C0F8    ), SODM_YEAST  (P00447    ), SODM_YEREN  (P53655    )
» more

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

SODF_AQUAE  (O67470    ), SODF_AQUPY  (Q9X6W9    ), SODF_PLAMA  (Q9Y1B0    ), 
SODM_CUPMC  (P17550    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
31 sequences

SODF_ANASL  (P83157    ), SODM_ALTAL  (P86254    ), SODM_ARTDA  (P83289    ), 
SODM_BACCE  (P83076    ), SODM_BRAFL  (P28761    ), SODM_CANLF  (P54712    ), 
SODM_DESDE  (P11419    ), SODM_EPTST  (P28762    ), SODM_HORVU  (P28524    ), 
SODM_LITCT  (P36215    ), SODM_MYCCE  (P53643    ), SODM_MYCCH  (P53644    ), 
SODM_MYCMA  (P53645    ), SODM_MYCMR  (P53646    ), SODM_MYCPH  (P53648    ), 
SODM_MYCSI  (P80582    ), SODM_MYCSZ  (P53650    ), SODM_PALVU  (P28765    ), 
SODM_PARCL  (P28766    ), SODM_PETMA  (P28767    ), SODM_PIG    (P28768    ), 
SODM_STRAI  (O33603    ), SODM_STRAY  (O33605    ), SODM_STRCB  (O54210    ), 
SODM_STRGR  (P80733    ), SODM_STRIN  (O54233    ), SODM_STRMT  (O33686    ), 
SODM_STROR  (O54263    ), SODM_STRPA  (O33756    ), SODM_STRPO  (O54266    ), 
SODM_STRSL  (O33783    )
» more

PDB
[Detailed view]
100 PDB

1AP5; 1AP6; 1AR4; 1AR5; 1AVM; 1B06; 1BS3; 1BSM; 1BT8; 1D5N; 1DT0; 1EM1; 1EN4; 1EN5; 1EN6; 1GN2; 1GN3; 1GN4; 1GN6; 1I08; 1I0H; 1IDS; 1ISA; 1ISB; 1ISC; 1IX9; 1IXB; 1JR9; 1KKC; 1LUV; 1LUW; 1MA1; 1MMM; 1MNG; 1MSD; 1N0J; 1N0N; 1P7G; 1PL4; 1PM9; 1QNM; 1QNN; 1SZX; 1UER; 1UES; 1VAR; 1VEW; 1WB7; 1WB8; 1XRE; 1XUQ; 1Y67; 1ZA5; 1ZLZ; 1ZSP; 1ZTE; 1ZUQ; 2ADP; 2ADQ; 2AW9; 2BKB; 2BPI; 2CDY; 2CE4; 2GDS; 2GOJ; 2NYB; 2P4K; 2QKA; 2QKC; 2RCV; 3AK1; 3AK2; 3AK3; 3BFR; 3CEI; 3DC5; 3DC6; 3EVK; 3K9S; 3KKY; 3LIO; 3LJ9; 3LJF; 3LSU; 3MDS; 3OT7; 3RN4; 3SDP; 3TQJ; 4C7U; 4E4E; 4F6E; 4L2A; 4L2B; 4L2C; 4L2D; 4X9Q; 4YIP; 5AG2
» more

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