Entry: PS00088

General information about the entry

Entry name [info] SOD_MN
Accession [info] PS00088
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); DEC-2004 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00083

Name and characterization of the entry

Description [info] Manganese and iron superoxide dismutases signature.
Pattern [info]
D-x-[WF]-E-H-[STA]-[FY](2).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 210 in 210 different sequences
Number of true positive hits 210 in 210 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 4
Number of 'partial' sequences 31
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.13 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] manganese at position 1
Site [info] manganese at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
210 sequences

SODB_ASPNG  (Q3MSU9), SODF1_ARATH (P21276), SODF1_ORYSJ (Q5VRL3), 
SODF2_ARATH (Q9LU64), SODF2_ORYSJ (Q5VSB7), SODF3_ARATH (Q9FMX0), 
SODF_ACIAM  (Q9P9L3), SODF_AERPE  (Q9Y8H8), SODF_BABBO  (O15905), 
SODF_BACFR  (P53638), SODF_BACSU  (O35023), SODF_BORPE  (P37369), 
SODF_CAMCO  (P53639), SODF_CAMJE  (Q0PBW9), SODF_CAMJJ  (A1VXQ2), 
SODF_COXBU  (P19685), SODF_ECO57  (P0AGD5), SODF_ECOL6  (P0AGD4), 
SODF_ECOLI  (P0AGD3), SODF_ENTHI  (P34107), SODF_HELPJ  (Q9ZKE6), 
SODF_HELPY  (P43312), SODF_LEGPH  (P31108), SODF_LEPBY  (P50061), 
SODF_METJ   (P23744), SODF_METTH  (P18868), SODF_METTM  (Q60036), 
SODF_MYCBO  (Q7TVI9), SODF_MYCTO  (P9WGE6), SODF_MYCTU  (P9WGE7), 
SODF_NICPL  (P22302), SODF_NOSS1  (Q8YSZ1), SODF_PHOLE  (P09213), 
SODF_PLAF7  (Q8IAY6), SODF_PLAFA  (Q9TW89), SODF_PLAFX  (Q27740), 
SODF_PLAVI  (Q9Y1A9), SODF_PORGI  (P19665), SODF_PSEAE  (P53641), 
SODF_PSEHT  (P84612), SODF_PSEPK  (Q88PD5), SODF_PSEPU  (P09223), 
SODF_PYRAE  (O93724), SODF_RHIME  (Q9XD74), SODF_RHOCA  (O30970), 
SODF_RICBR  (Q1RH88), SODF_RICCN  (Q92HJ3), SODF_RICFE  (Q4ULI1), 
SODF_RICPR  (Q9ZD15), SODF_RICTY  (Q68WK0), SODF_SALTI  (P0A2F5), 
SODF_SALTY  (P0A2F4), SODF_SHIFL  (P0AGD6), SODF_SOYBN  (P28759), 
SODF_STRCO  (O51917), SODF_SULAC  (Q08713), SODF_SULSO  (P80857), 
SODF_SYNE7  (P18655), SODF_SYNY3  (P77968), SODF_TETPY  (P19666), 
SODM1_ARATH (O81235), SODM1_BACAN (Q81LW0), SODM1_BACCR (Q818I1), 
SODM1_CAEEL (P31161), SODM1_HALME (O08461), SODM1_HALSA (P09737), 
SODM1_HALVD (Q03300), SODM1_LEPBY (P50058), SODM1_MAIZE (P09233), 
SODM1_STAA3 (Q2FGH0), SODM1_STAA8 (P0A0J3), SODM1_STAAB (Q2YT26), 
SODM1_STAAC (Q5HFK7), SODM1_STAAM (P0A0J1), SODM1_STAAN (P99098), 
SODM1_STAAR (Q6GGE6), SODM1_STAAS (Q6G913), SODM1_STAAW (P0A0J2), 
SODM2_ARATH (Q9LYK8), SODM2_BACAN (Q81JK8), SODM2_BACCR (Q814I6), 
SODM2_CAEEL (P41977), SODM2_HALME (O08460), SODM2_HALSA (P09224), 
SODM2_HALVD (Q03301), SODM2_LEPBY (P50059), SODM2_MAIZE (P41978), 
SODM2_STAA3 (Q2FKC6), SODM2_STAA8 (Q2G261), SODM2_STAAB (Q2YUU9), 
SODM2_STAAC (Q5HJN5), SODM2_STAAM (P66830), SODM2_STAAN (P66831), 
SODM2_STAAR (Q6GKH2), SODM2_STAAS (Q6GCZ1), SODM2_STAAW (P66832), 
SODM3_LEPBY (P50060), SODM3_MAIZE (P41979), SODM4_MAIZE (P41980), 
SODM_ACIAD  (Q59094), SODM_AGABI  (Q9P4T6), SODM_ASPFU  (Q92450), 
SODM_ASPOR  (Q877B6), SODM_BACCA  (P28760), SODM_BACHD  (Q9KD10), 
SODM_BACSU  (P54375), SODM_BORBU  (O30563), SODM_BORPE  (P53642), 
SODM_BOVIN  (P41976), SODM_BUCAI  (P57286), SODM_BUCAP  (Q8K9V4), 
SODM_BUCBP  (Q89AR7), SODM_CALJA  (Q8HXP0), SODM_CANAX  (O13401), 
SODM_CAPAN  (O49066), SODM_CAVPO  (P49114), SODM_CHAFE  (O96347), 
SODM_CHLMU  (Q9PKA0), SODM_CHLPN  (Q9Z9C4), SODM_CHLRE  (Q42684), 
SODM_CHLTR  (O84296), SODM_CORDI  (P42821), SODM_DEBHA  (Q6BQZ1), 
SODM_DEIRA  (Q9RUV2), SODM_DICDI  (Q55BJ9), SODM_DROME  (Q00637), 
SODM_ECO57  (P66828), SODM_ECOLI  (P00448), SODM_ENTFA  (Q838I4), 
SODM_GANMI  (Q92429), SODM_GEOSE  (P00449), SODM_GLOMM  (Q694A3), 
SODM_HAEDU  (O30826), SODM_HAEIN  (P43725), SODM_HALHI  (O08459), 
SODM_HALMA  (Q03302), SODM_HEVBR  (P35017), SODM_HORSE  (Q9XS41), 
SODM_HUMAN  (P04179), SODM_HYLLA  (Q8HXP5), SODM_LACLA  (P0A4J1), 
SODM_LACLM  (P0A4J2), SODM_LISIN  (Q92BR6), SODM_LISIV  (P28763), 
SODM_LISMO  (P28764), SODM_MACFA  (Q8HXP3), SODM_MACFU  (Q8HXP4), 
SODM_MACMU  (Q8HXP2), SODM_MACNE  (Q5FB30), SODM_MANHA  (Q59679), 
SODM_MOUSE  (P09671), SODM_MYCAV  (P47201), SODM_MYCFO  (Q59519), 
SODM_MYCIA  (P46728), SODM_MYCKA  (P50912), SODM_MYCLE  (P13367), 
SODM_MYCLP  (O86165), SODM_MYCPA  (P53647), SODM_MYCS2  (A0R652), 
SODM_MYCSC  (P50913), SODM_MYCSM  (P53649), SODM_NEUCR  (Q9Y783), 
SODM_NICPL  (P11796), SODM_NOCAS  (P53651), SODM_ONCVO  (P41981), 
SODM_ORYSJ  (Q43008), SODM_PANTR  (Q8HXP7), SODM_PASMU  (Q9CPN6), 
SODM_PEA    (P27084), SODM_PENCH  (O75007), SODM_PONPY  (Q8HXP6), 
SODM_PROFR  (P80293), SODM_PRUPE  (Q9SM64), SODM_PSEAE  (P53652), 
SODM_PSEPU  (P77929), SODM_RABIT  (P41982), SODM_RAOPL  (P22799), 
SODM_RAT    (P07895), SODM_SALTI  (Q8Z2V9), SODM_SALTY  (P43019), 
SODM_SAPAP  (Q8HXP1), SODM_SCHPO  (Q9UQX0), SODM_SHIFL  (P66829), 
SODM_STACA  (Q9F326), SODM_STAEP  (Q8VQ15), SODM_STAEQ  (Q5HNZ5), 
SODM_STAES  (P0C0Q6), SODM_STAHJ  (Q4L6Q3), SODM_STAS1  (Q49XZ6), 
SODM_STAXY  (Q9K4V3), SODM_STRA3  (P0A4J3), SODM_STRA5  (P0A4J4), 
SODM_STRAG  (P0A4J5), SODM_STRMU  (P09738), SODM_STRP1  (P0C0I1), 
SODM_STRP3  (P0DF72), SODM_STRP6  (Q5XBF8), SODM_STRP8  (Q8P0D4), 
SODM_STRPN  (P0A4J6), SODM_STRPQ  (P0DF73), SODM_STRPY  (P0C0I0), 
SODM_STRR6  (P0A4J7), SODM_THEAQ  (P53653), SODM_THET2  (P61502), 
SODM_THET8  (P61503), SODM_VIRHA  (Q7SIC3), SODM_XANC8  (P0C0F9), 
SODM_XANCP  (P0C0F8), SODM_YEAST  (P00447), SODM_YEREN  (P53655)
» More

UniProtKB/Swiss-Prot
False negative sequences
4 sequences

SODF_AQUAE  (O67470), SODF_AQUPY  (Q9X6W9), SODF_PLAMA  (Q9Y1B0), 
SODM_RALME  (P17550)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
31 sequences

SODF_ANASL  (P83157), SODM_ALTAL  (P86254), SODM_ARTDA  (P83289), 
SODM_BACCE  (P83076), SODM_BRAFL  (P28761), SODM_CANFA  (P54712), 
SODM_DESDE  (P11419), SODM_EPTST  (P28762), SODM_HORVU  (P28524), 
SODM_LITCT  (P36215), SODM_MYCCE  (P53643), SODM_MYCCH  (P53644), 
SODM_MYCMA  (P53645), SODM_MYCMR  (P53646), SODM_MYCPH  (P53648), 
SODM_MYCSI  (P80582), SODM_MYCSZ  (P53650), SODM_PALVU  (P28765), 
SODM_PARCL  (P28766), SODM_PETMA  (P28767), SODM_PIG    (P28768), 
SODM_STRAI  (O33603), SODM_STRAY  (O33605), SODM_STRCB  (O54210), 
SODM_STRGR  (P80733), SODM_STRIN  (O54233), SODM_STRMT  (O33686), 
SODM_STROR  (O54263), SODM_STRPA  (O33756), SODM_STRPO  (O54266), 
SODM_STRSL  (O33783)
» More

PDB
[Detailed view]
97 PDB

1AP5; 1AP6; 1AR4; 1AR5; 1AVM; 1B06; 1BS3; 1BSM; 1BT8; 1D5N; 1DT0; 1EM1; 1EN4; 1EN5; 1EN6; 1GN2; 1GN3; 1GN4; 1GN6; 1I08; 1I0H; 1IDS; 1ISA; 1ISB; 1ISC; 1IX9; 1IXB; 1JR9; 1KKC; 1LUV; 1LUW; 1MA1; 1MMM; 1MNG; 1MSD; 1N0J; 1N0N; 1P7G; 1PL4; 1PM9; 1QNM; 1QNN; 1SZX; 1UER; 1UES; 1VAR; 1VEW; 1WB7; 1WB8; 1XRE; 1XUQ; 1Y67; 1ZA5; 1ZLZ; 1ZSP; 1ZTE; 1ZUQ; 2ADP; 2ADQ; 2AW9; 2BKB; 2BPI; 2CDY; 2CE4; 2GDS; 2GOJ; 2NYB; 2P4K; 2QKA; 2QKC; 2RCV; 3AK1; 3AK2; 3AK3; 3BFR; 3CEI; 3DC5; 3DC6; 3EVK; 3K9S; 3KKY; 3LIO; 3LJ9; 3LJF; 3LSU; 3MDS; 3OT7; 3RN4; 3SDP; 3TQJ; 4C7U; 4E4E; 4F6E; 4L2A; 4L2B; 4L2C; 4L2D
» More

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