Entry: PS00106

General information about the entry
Entry name GALACTOKINASE
Accession number PS00106
Entry type PATTERN
Date APR-1990 (CREATED); JUL-1999 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00099
Name and characterization of the entry
DescriptionGalactokinase signature.
Pattern G-R-x-N-[LIV]-I-G-[DE]-H-x-D-Y.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 148 hits in 148 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 148 hits in 148 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 98.67 %
Comments
  • Taxonomic range: Archaea, Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
GAL1_ACTP2  (A3N103), GAL1_ACTP7  (B3H1M3), GAL1_ACTPJ  (B0BPT5), 
GAL1_ACTPL  (P94169), GAL1_ACTSZ  (A6VQK2), GAL1_AERHH  (A0KQH8), 
GAL1_BACHD  (Q9KDV4), GAL1_BACSU  (P39574), GAL1_CANAX  (P56091), 
GAL1_CANMA  (P56599), GAL1_CANPA  (O42821), GAL1_CHLAA  (A9WB97), 
GAL1_CHLAD  (B8GCS2), GAL1_CHLSY  (B9LFE4), GAL1_CITK8  (A8AJ37), 
GAL1_CLOAB  (Q97EZ6), GAL1_CLOB8  (A6M1P8), GAL1_CLOP1  (Q0TQU5), 
GAL1_CLOPE  (Q8XKP9), GAL1_CLOPS  (Q0ST92), GAL1_CLOTE  (Q896X8), 
GAL1_CROS8  (A7MIX5), GAL1_ECO24  (A7ZJD2), GAL1_ECO27  (B7ULN0), 
GAL1_ECO45  (B7MGL4), GAL1_ECO55  (B7LAF8), GAL1_ECO57  (P0A6T4), 
GAL1_ECO5E  (B5YRF5), GAL1_ECO7I  (B7NNH9), GAL1_ECO81  (B7MPP1), 
GAL1_ECO8A  (B7M6C0), GAL1_ECOBW  (C4ZXS8), GAL1_ECOHS  (A7ZY13), 
GAL1_ECOK1  (A1A900), GAL1_ECOL5  (Q0TJU4), GAL1_ECOL6  (Q8FJS1), 
GAL1_ECOLC  (B1IXX9), GAL1_ECOLI  (P0A6T3), GAL1_ECOLU  (B7N9Z9), 
GAL1_ECOSE  (B6I7R1), GAL1_ECOSM  (B1LM48), GAL1_ECOUT  (Q1REH4), 
GAL1_ENT38  (A4W899), GAL1_ENTFA  (Q836P0), GAL1_ERWT9  (B2VBV2), 
GAL1_ESCF3  (B7LK02), GAL1_EXIS2  (B1YIH8), GAL1_FUSNN  (Q8RHD0), 
GAL1_HAEIE  (A5UDQ5), GAL1_HAEIG  (A5UHX0), GAL1_HAEIN  (P31767), 
GAL1_HAEPS  (B8F7C7), GAL1_KLULA  (P09608), GAL1_LACC3  (Q03BB8), 
GAL1_LACCA  (O84902), GAL1_LACCB  (B3W7I5), GAL1_LACF3  (B2GEP6), 
GAL1_LACHE  (Q00052), GAL1_LACLA  (Q9R7D7), GAL1_LACLM  (Q9S6S2), 
GAL1_LACPL  (Q88SE8), GAL1_LACRD  (A5VME2), GAL1_LACRJ  (B2G9P6), 
GAL1_LACS1  (Q1WUZ4), GAL1_MANSM  (Q65UV5), GAL1_MYCBO  (Q7U1L7), 
GAL1_MYCBP  (A1KG98), GAL1_MYCBT  (C1AKV1), GAL1_MYCTA  (A5U003), 
GAL1_MYCTU  (P96910), GAL1_PASMU  (P57899), GAL1_PROMH  (B4F0A6), 
GAL1_PYRFU  (Q9HHB6), GAL1_PYRHO  (O58107), GAL1_PYRKO  (Q5JEK8), 
GAL1_ROSCS  (A7NI09), GAL1_ROSS1  (A5UZX0), GAL1_SALA4  (B5F052), 
GAL1_SALAR  (A9MJI2), GAL1_SALCH  (Q57RI3), GAL1_SALDC  (B5FP41), 
GAL1_SALEP  (B5QX45), GAL1_SALG2  (B5R741), GAL1_SALHS  (B4TC28), 
GAL1_SALNS  (B4SZH7), GAL1_SALPA  (Q5PG77), GAL1_SALPB  (A9MTL0), 
GAL1_SALPC  (C0PWW2), GAL1_SALPK  (B5BC50), GAL1_SALSV  (B4TQR9), 
GAL1_SALTI  (Q8Z8B0), GAL1_SALTY  (P22713), GAL1_SCHPO  (Q9HDU2), 
GAL1_SERP5  (A8GBA5), GAL1_SHIB3  (B2TUY8), GAL1_SHIBS  (Q324G2), 
GAL1_SHIDS  (Q32IG8), GAL1_SHIF8  (Q0T6Y7), GAL1_SHIFL  (Q83M01), 
GAL1_SHISS  (Q3Z453), GAL1_STACT  (Q9RGS1), GAL1_STAS1  (Q49ZK2), 
GAL1_STRCO  (Q9K3S8), GAL1_STRLI  (P13227), GAL1_STRMU  (P96993), 
GAL1_STRPN  (Q97NZ6), GAL1_STRR6  (Q8DNK7), GAL1_STRSY  (A4VT88), 
GAL1_STRT1  (Q5LYY7), GAL1_STRTD  (Q03JS8), GAL1_STRTR  (Q9ZB10), 
GAL1_THEAB  (B7IDE2), GAL1_THEMA  (P56838), GAL1_THENE  (O85253), 
GAL1_THENN  (B9K9C8), GAL1_THEP1  (A5IMZ6), GAL1_THESQ  (B1LCQ5), 
GAL1_THETN  (Q8R8R7), GAL1_TOLAT  (C4LB24), GAL1_VIBCH  (Q9KRP1), 
GAL1_VIBF1  (Q5E0M1), GAL1_VIBFM  (B5ETC9), GAL1_VIBHB  (A7MV01), 
GAL1_VIBPA  (Q87M60), GAL1_VIBVU  (Q8DBN9), GAL1_VIBVY  (Q7MI80), 
GAL1_YEAST  (P04385), GAL1_YERE8  (A1JRX5), GAL1_YERP3  (A7FKP2), 
GAL1_YERPA  (Q1C960), GAL1_YERPB  (B2K8R6), GAL1_YERPE  (Q8ZGY3), 
GAL1_YERPG  (A9R3B5), GAL1_YERPN  (Q1CFP0), GAL1_YERPP  (A4TNR8), 
GAL1_YERPS  (Q66D80), GAL1_YERPY  (B1JST8), GAL3_YEAST  (P13045), 
GALK1_ARATH (Q9SEE5), GALK1_BOVIN (A6H768), GALK1_CANFA (Q9GKK4), 
GALK1_HUMAN (P51570), GALK1_MOUSE (Q9R0N0), GALK2_HUMAN (Q01415), 
GALK2_MOUSE (Q68FH4), GALK2_PONAB (Q5R6J8), GALK2_RAT   (Q5XIG6), 
GALK_DICDI  (Q54DN6)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
GAL1_LACBA  (Q03PA8), GAL1_TREPA  (O83433)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]
1PIE; 1S4E; 1WUU; 1YH7; 2A2C; 2A2D; 2AJ4; 2CZ9; 2DEI; 2DEJ; 3V2U; 3V5R;

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View entry in raw text format (no links)
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