Entry: PS00115

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General information about the entry

Entry name [info] RNA_POL_II_REPEAT
Accession [info] PS00115
Entry type [info] PATTERN
Date [info] APR-1990 (CREATED); APR-1990 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00106

Name and characterization of the entry

Description [info] Eukaryotic RNA polymerase II heptapeptide repeat.
Pattern [info]
Y-[ST]-P-[ST]-S-P-[STANK].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 350 in 16 different sequences
Number of true positive hits 348 in 14 different sequences
Number of 'unknown' hits
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.43 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 43
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
14 sequences

NRPB1_ARATH (P18616), RPB1_ASHGO  (Q75A34), RPB1_CAEBR  (P35074), 
RPB1_CAEEL  (P16356), RPB1_CRIGR  (P11414), RPB1_DICDI  (P35084), 
RPB1_DROME  (P04052), RPB1_ENCCU  (Q8SSC4), RPB1_HUMAN  (P24928), 
RPB1_MOUSE  (P08775), RPB1_PICGU  (A5DCV3), RPB1_PLAFD  (P14248), 
RPB1_SCHPO  (P36594), RPB1_YEAST  (P04050)
» More

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

DNLJ_THEAB  (B7IDX6), RFX3_XENTR  (Q0V9K5)

		
PDB
[Detailed view]
2 PDB

3D9O; 4GWQ

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