Entry: PS00115

General information about the entry

Entry name [info] RNA_POL_II_REPEAT
Accession [info] PS00115
Entry type [info] PATTERN
Date [info] 01-APR-1990 CREATED; 01-APR-1990 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00106

Name and characterization of the entry

Description [info] Eukaryotic RNA polymerase II heptapeptide repeat.
Pattern [info] 
Y-[ST]-P-[ST]-S-P-[STANK].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 350 in 16 different sequences
Number of true positive hits 348 in 14 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.43 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 43
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 14 sequences 

NRPB1_ARATH (P18616    ), RPB1_ASHGO  (Q75A34    ), RPB1_CAEBR  (P35074    ), 

RPB1_CAEEL  (P16356    ), RPB1_CRIGR  (P11414    ), RPB1_DICDI  (P35084    ), 
RPB1_DROME  (P04052    ), RPB1_ENCCU  (Q8SSC4    ), RPB1_HUMAN  (P24928    ), 
RPB1_MOUSE  (P08775    ), RPB1_PICGU  (A5DCV3    ), RPB1_PLAFD  (P14248    ), 
RPB1_SCHPO  (P36594    ), RPB1_YEAST  (P04050    )
» more

UniProtKB/Swiss-Prot
False positive sequences		 2 sequences 

DNLJ_THEAB  (B7IDX6    ), RFX3_XENTR  (Q0V9K5    )


				
	

	

		PDB
[Detailed view]		
		
			3 PDB
			


			3D9O; 4GWQ; 5SVA
				
	





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